RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W ODC1Q03028 310 aa3.38□□□□□ -1.87
SCD6YPR129W CTL1Q03220 320 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W YML037CQ03703 340 aa3.38□□□□□ -1.87
SCD6YPR129W APC4Q04601 652 aa3.38□□□□□ -1.87
SCD6YPR129W SMA2Q04658 369 aa3.38□□□□□ -1.87
SCD6YPR129W TAF9Q05027 157 aa3.38□□□□□ -1.87
SCD6YPR129W ATG39Q06159 398 aa3.38□□□□□ -1.87
SCD6YPR129W YPR078CQ06813 372 aa3.38□□□□□ -1.87
SCD6YPR129W PRP11Q07350 266 aaPredicted RBP3.38□□□□□ -1.87
SCD6YPR129W BSC6Q08280 497 aa3.38□□□□□ -1.87
SCD6YPR129W YOR365CQ08844 703 aa3.38□□□□□ -1.87
SCD6YPR129W SCP1Q08873 200 aa3.38□□□□□ -1.87
SCD6YPR129W BTS1Q12051 335 aa3.38□□□□□ -1.87
SCD6YPR129W FCY22Q12119 530 aa3.38□□□□□ -1.87
SCD6YPR129W SPC3Q12133 184 aa3.38□□□□□ -1.87
SCD6YPR129W PER33Q12144 273 aa3.38□□□□□ -1.87
SCD6YPR129W TPO4Q12256 659 aa3.38□□□□□ -1.87
SCD6YPR129W CTF3Q12748 733 aa3.38□□□□□ -1.87
SCD6YPR129W MEX67Q99257 599 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W TPI1P00942 248 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W BCY1P07278 416 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W SEC53P07283 254 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W RPS28BP0C0X0 67 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W RPL42AP0CX27 106 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W RPL42BP0CX28 106 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W RPL19AP0CX82 189 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W RPL19BP0CX83 189 aaPredicted RBP3.37□□□□□ -1.87
SCD6YPR129W DPM1P14020 267 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W SPO7P18410 259 aa3.37□□□□□ -1.87
SCD6YPR129W YCR061WP25639 631 aa3.37□□□□□ -1.87
SCD6YPR129W CWP1P28319 239 aa3.37□□□□□ -1.87
SCD6YPR129W SUA7P29055 345 aaPredicted RBP3.37□□□□□ -1.87
SCD6YPR129W PEX4P29340 183 aa3.37□□□□□ -1.87
SCD6YPR129W LDS1P31379 325 aa3.37□□□□□ -1.87
SCD6YPR129W NRP1P32770 719 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SCD6YPR129W PRP18P33411 251 aaPredicted RBP3.37□□□□□ -1.87
SCD6YPR129W YNK1P36010 153 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W TUL1P36096 758 aa3.37□□□□□ -1.87
SCD6YPR129W MRPL24P36525 258 aaPredicted RBP3.37□□□□□ -1.87
SCD6YPR129W SOL2P37262 315 aa3.37□□□□□ -1.87
SCD6YPR129W CBP4P37267 147 aa3.37□□□□□ -1.87
SCD6YPR129W YPK3P38070 525 aa3.37□□□□□ -1.87
SCD6YPR129W PRS3P38689 320 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W MLH1P38920 769 aa3.37□□□□□ -1.87
SCD6YPR129W OXA1P39952 402 aa3.37□□□□□ -1.87
SCD6YPR129W EAF5P39995 279 aa3.37□□□□□ -1.87
SCD6YPR129W SMX2P40204 77 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W RFC2P40348 353 aa3.37□□□□□ -1.87
SCD6YPR129W DIM1P41819 318 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W SPG5P42933 373 aa3.37□□□□□ -1.87
SCD6YPR129W ASG7P46993 209 aa3.37□□□□□ -1.87
SCD6YPR129W AAD10P47182 288 aa3.37□□□□□ -1.87
SCD6YPR129W AIF1P52923 378 aa3.37□□□□□ -1.87
SCD6YPR129W YGL235WP53071 178 aa3.37□□□□□ -1.87
SCD6YPR129W RMD9P53140 646 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W HHO1P53551 258 aa3.37□□□□□ -1.87
SCD6YPR129W YNR066CP53752 436 aa3.37□□□□□ -1.87
SCD6YPR129W BOR1P53838 576 aa3.37□□□□□ -1.87
SCD6YPR129W ARK1P53974 638 aa3.37□□□□□ -1.87
SCD6YPR129W APS2Q00381 147 aa3.37□□□□□ -1.87
SCD6YPR129W YPL108WQ02872 168 aaPredicted RBP3.37□□□□□ -1.87
SCD6YPR129W AIM36Q03798 255 aa3.37□□□□□ -1.87
SCD6YPR129W SMP3Q04174 516 aa3.37□□□□□ -1.87
SCD6YPR129W MDM30Q05930 598 aa3.37□□□□□ -1.87
SCD6YPR129W RRG8Q06109 277 aa3.37□□□□□ -1.87
SCD6YPR129W GAS2Q06135 555 aa3.37□□□□□ -1.87
SCD6YPR129W PAM18Q07914 168 aa3.37□□□□□ -1.87
SCD6YPR129W FSF1Q12029 327 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W WTM1Q12363 437 aaKnown RBP3.37□□□□□ -1.87
SCD6YPR129W YOL159C-AQ3E769 90 aa3.37□□□□□ -1.87
SCD6YPR129W RPS28AQ3E7X9 67 aaPredicted RBP3.37□□□□□ -1.87
SCD6YPR129W YPR014CQ6B0W2 109 aa3.37□□□□□ -1.87
SCD6YPR129W PDR12Q02785 1511 aa3.37□□□□□ -1.87
SCD6YPR129W SWR1Q05471 1514 aa3.37□□□□□ -1.87
SCD6YPR129W REP2P03872 296 aa3.36□□□□□ -1.87
SCD6YPR129W GAL80P04387 435 aa3.36□□□□□ -1.87
SCD6YPR129W CBP1P07252 654 aa3.36□□□□□ -1.87
SCD6YPR129W NUC1P08466 329 aa3.36□□□□□ -1.87
SCD6YPR129W GUK1P15454 187 aaKnown RBP3.36□□□□□ -1.87
SCD6YPR129W GRX2P17695 143 aaKnown RBP3.36□□□□□ -1.87
SCD6YPR129W SAG1P20840 650 aa3.36□□□□□ -1.87
SCD6YPR129W MAG1P22134 296 aaKnown RBP3.36□□□□□ -1.87
SCD6YPR129W URK1P27515 501 aa3.36□□□□□ -1.87
SCD6YPR129W APE2P32454 952 aaKnown RBP3.36□□□□□ -1.87
SCD6YPR129W SRB5P32585 307 aa3.36□□□□□ -1.87
SCD6YPR129W ECT1P33412 323 aa3.36□□□□□ -1.87
SCD6YPR129W HES1P35843 434 aa3.36□□□□□ -1.87
SCD6YPR129W YKL075CP36083 450 aa3.36□□□□□ -1.87
SCD6YPR129W RIB1P38066 345 aa3.36□□□□□ -1.87
SCD6YPR129W AVT5P38176 459 aa3.36□□□□□ -1.87
SCD6YPR129W CST26P38226 397 aa3.36□□□□□ -1.87
SCD6YPR129W SLM4P38247 162 aa3.36□□□□□ -1.87
SCD6YPR129W IST2P38250 946 aa3.36□□□□□ -1.87
SCD6YPR129W IPI1P38803 334 aaPredicted RBP3.36□□□□□ -1.87
SCD6YPR129W YHR127WP38833 243 aaKnown RBP3.36□□□□□ -1.87
SCD6YPR129W VPS52P39904 641 aa3.36□□□□□ -1.87
SCD6YPR129W ERG28P40030 148 aa3.36□□□□□ -1.87
SCD6YPR129W LCP5P40079 357 aaPredicted RBP3.36□□□□□ -1.87
SCD6YPR129W MAD2P40958 196 aa3.36□□□□□ -1.87
SCD6YPR129W SFH5P47008 294 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms