RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W TEX1P53851 422 aaKnown RBP3.27□□□□□ -1.89
MSD1YPL104W YLR460CP54007 376 aa3.27□□□□□ -1.89
MSD1YPL104W NRG1Q03125 231 aa3.27□□□□□ -1.89
MSD1YPL104W PLM2Q04383 521 aa3.27□□□□□ -1.89
MSD1YPL104W PEX10Q05568 337 aa3.27□□□□□ -1.89
MSD1YPL104W YLR456WQ06199 204 aa3.27□□□□□ -1.89
MSD1YPL104W YPR127WQ06494 345 aa3.27□□□□□ -1.89
MSD1YPL104W PEX27Q08580 376 aa3.27□□□□□ -1.89
MSD1YPL104W REX3Q12090 404 aa3.27□□□□□ -1.89
MSD1YPL104W SFG1Q12507 346 aa3.27□□□□□ -1.89
MSD1YPL104W SUS1Q6WNK7 96 aa3.27□□□□□ -1.89
MSD1YPL104W KIN28P06242 306 aa3.26□□□□□ -1.89
MSD1YPL104W SIR2P06700 562 aa3.26□□□□□ -1.89
MSD1YPL104W PRE7P23724 241 aaKnown RBP3.26□□□□□ -1.89
MSD1YPL104W RAD51P25454 400 aa3.26□□□□□ -1.89
MSD1YPL104W PTC6P25646 442 aa3.26□□□□□ -1.89
MSD1YPL104W PRE2P30656 287 aaKnown RBP3.26□□□□□ -1.89
MSD1YPL104W PMT2P31382 759 aa3.26□□□□□ -1.89
MSD1YPL104W COQ2P32378 372 aa3.26□□□□□ -1.89
MSD1YPL104W YEF1P32622 495 aa3.26□□□□□ -1.89
MSD1YPL104W EMP70P32802 667 aa3.26□□□□□ -1.89
MSD1YPL104W YKL071WP36086 256 aa3.26□□□□□ -1.89
MSD1YPL104W MBA1P38300 278 aa3.26□□□□□ -1.89
MSD1YPL104W RPP1P38786 293 aa3.26□□□□□ -1.89
MSD1YPL104W NSG1P38837 291 aa3.26□□□□□ -1.89
MSD1YPL104W SPG5P42933 373 aa3.26□□□□□ -1.89
MSD1YPL104W ATG18P43601 500 aa3.26□□□□□ -1.89
MSD1YPL104W BPL1P48445 690 aaPredicted RBP3.26□□□□□ -1.89
MSD1YPL104W MRH4P53166 561 aa3.26□□□□□ -1.89
MSD1YPL104W MPA43P53583 542 aaPredicted RBP3.26□□□□□ -1.89
MSD1YPL104W TDA1Q03533 586 aa3.26□□□□□ -1.89
MSD1YPL104W YMR315WQ04869 349 aaKnown RBP3.26□□□□□ -1.89
MSD1YPL104W ENB1Q08299 606 aa3.26□□□□□ -1.89
MSD1YPL104W YDL177CQ12257 170 aa3.26□□□□□ -1.89
MSD1YPL104W RTN2Q12443 393 aa3.26□□□□□ -1.89
MSD1YPL104W NUP1P20676 1076 aa3.25□□□□□ -1.89
MSD1YPL104W EXG1P23776 448 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W ERG8P24521 451 aa3.25□□□□□ -1.89
MSD1YPL104W BUD23P25627 275 aaPredicted RBP3.25□□□□□ -1.89
MSD1YPL104W AHC2P25649 128 aa3.25□□□□□ -1.89
MSD1YPL104W SPT14P32363 452 aa3.25□□□□□ -1.89
MSD1YPL104W TRS65P32893 560 aa3.25□□□□□ -1.89
MSD1YPL104W ECT1P33412 323 aa3.25□□□□□ -1.89
MSD1YPL104W HIS7P33734 552 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W LST4P34239 828 aa3.25□□□□□ -1.89
MSD1YPL104W GPX1P36014 167 aa3.25□□□□□ -1.89
MSD1YPL104W THI2P38141 450 aa3.25□□□□□ -1.89
MSD1YPL104W CHK1P38147 527 aa3.25□□□□□ -1.89
MSD1YPL104W MAL32P38158 584 aa3.25□□□□□ -1.89
MSD1YPL104W SKN7P38889 622 aa3.25□□□□□ -1.89
MSD1YPL104W YHR210CP38893 341 aa3.25□□□□□ -1.89
MSD1YPL104W MIT1P40002 666 aa3.25□□□□□ -1.89
MSD1YPL104W RTT105P40063 208 aa3.25□□□□□ -1.89
MSD1YPL104W YIL077CP40508 320 aa3.25□□□□□ -1.89
MSD1YPL104W HXT9P40885 567 aa3.25□□□□□ -1.89
MSD1YPL104W SEH1P53011 349 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W ARO8P53090 500 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W MAL12P53341 584 aa3.25□□□□□ -1.89
MSD1YPL104W PAU12P53343 120 aa3.25□□□□□ -1.89
MSD1YPL104W RRN9P53437 365 aa3.25□□□□□ -1.89
MSD1YPL104W HXT11P54862 567 aa3.25□□□□□ -1.89
MSD1YPL104W EKI1Q03764 534 aa3.25□□□□□ -1.89
MSD1YPL104W PAL1Q05518 499 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W SEI1Q06058 285 aa3.25□□□□□ -1.89
MSD1YPL104W RGC1Q06108 1083 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W TAZ1Q06510 381 aa3.25□□□□□ -1.89
MSD1YPL104W AIM6Q07716 390 aa3.25□□□□□ -1.89
MSD1YPL104W RRG7Q08774 242 aaPredicted RBP3.25□□□□□ -1.89
MSD1YPL104W YDL109CQ12103 647 aa3.25□□□□□ -1.89
MSD1YPL104W PRP46Q12417 451 aaPredicted RBP3.25□□□□□ -1.89
MSD1YPL104W ISA2Q12425 185 aa3.25□□□□□ -1.89
MSD1YPL104W YOS9Q99220 542 aa3.25□□□□□ -1.89
MSD1YPL104W HFA1P32874 2273 aa3.25□□□□□ -1.89
MSD1YPL104W QCR7P00128 127 aa3.25□□□□□ -1.89
MSD1YPL104W CAP2P13517 287 aa3.25□□□□□ -1.89
MSD1YPL104W DAL82P21705 255 aa3.25□□□□□ -1.89
MSD1YPL104W MDH3P32419 343 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
MSD1YPL104W PAU24P38155 120 aa3.25□□□□□ -1.89
MSD1YPL104W YBR137WP38276 179 aa3.25□□□□□ -1.89
MSD1YPL104W MTC4P38335 694 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W YHR180WP38868 163 aa3.25□□□□□ -1.89
MSD1YPL104W MLH1P38920 769 aa3.25□□□□□ -1.89
MSD1YPL104W FET3P38993 636 aa3.25□□□□□ -1.89
MSD1YPL104W YJL193WP39542 402 aa3.25□□□□□ -1.89
MSD1YPL104W SNO3P43544 222 aa3.25□□□□□ -1.89
MSD1YPL104W SFH5P47008 294 aa3.25□□□□□ -1.89
MSD1YPL104W MDV1P47025 714 aa3.25□□□□□ -1.89
MSD1YPL104W MTL1P53214 551 aa3.25□□□□□ -1.89
MSD1YPL104W VOA1P53262 265 aa3.25□□□□□ -1.89
MSD1YPL104W OGG1P53397 376 aaPredicted RBP3.25□□□□□ -1.89
MSD1YPL104W MPP6P53725 186 aaPredicted RBP3.25□□□□□ -1.89
MSD1YPL104W RHO5P53879 331 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W YPL108WQ02872 168 aaPredicted RBP3.25□□□□□ -1.89
MSD1YPL104W BUR2Q05949 395 aa3.25□□□□□ -1.89
MSD1YPL104W RRP9Q06506 573 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W GPN3Q06543 272 aa3.25□□□□□ -1.89
MSD1YPL104W CYK3Q07533 885 aa3.25□□□□□ -1.89
MSD1YPL104W COQ10Q08058 207 aa3.25□□□□□ -1.89
MSD1YPL104W MCP1Q12106 302 aa3.25□□□□□ -1.89
MSD1YPL104W RLM1Q12224 676 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms