RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W IES6P32617 166 aa1.99□□□□□ -2.09
VPS16YPL045W MRX3P38172 270 aa1.99□□□□□ -2.09
VPS16YPL045W SOP4P39543 234 aaPredicted RBP1.99□□□□□ -2.09
VPS16YPL045W GLG2P47011 380 aa1.99□□□□□ -2.09
VPS16YPL045W YJR085CP47131 105 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W UBC13P52490 153 aa1.99□□□□□ -2.09
VPS16YPL045W NBP1P52919 319 aaPredicted RBP1.99□□□□□ -2.09
VPS16YPL045W SWC4P53201 476 aa1.99□□□□□ -2.09
VPS16YPL045W REX2P54964 269 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W SLT2Q00772 484 aa1.99□□□□□ -2.09
VPS16YPL045W RTN1Q04947 295 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W YHC1Q05900 231 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W TAZ1Q06510 381 aa1.99□□□□□ -2.09
VPS16YPL045W SNF8Q12483 233 aa1.99□□□□□ -2.09
VPS16YPL045W PRM4Q12498 284 aa1.99□□□□□ -2.09
VPS16YPL045W RPS14AP06367 137 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W NHP6BP11633 99 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W ERD1P16151 362 aa1.99□□□□□ -2.09
VPS16YPL045W COQ1P18900 473 aa1.99□□□□□ -2.09
VPS16YPL045W POF1P25576 258 aa1.99□□□□□ -2.09
VPS16YPL045W PRS2P38620 318 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W RPS14BP39516 138 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W HAC1P41546 238 aa1.99□□□□□ -2.09
VPS16YPL045W CDH1P53197 566 aa1.99□□□□□ -2.09
VPS16YPL045W YNL040WP53960 456 aaPredicted RBP1.99□□□□□ -2.09
VPS16YPL045W YMR010WQ03687 405 aa1.99□□□□□ -2.09
VPS16YPL045W RPO41P13433 1351 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W THP2O13539 261 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RPP0P05317 312 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RPS24AP0CX31 135 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RPS24BP0CX32 135 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RPS8AP0CX39 200 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RPS8BP0CX40 200 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W TCP1P12612 559 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W CTA1P15202 515 aa1.98□□□□□ -2.09
VPS16YPL045W RPO26P20435 155 aa1.98□□□□□ -2.09
VPS16YPL045W MIR1P23641 311 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RPL24BP24000 155 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W CPR4P25334 318 aa1.98□□□□□ -2.09
VPS16YPL045W YKL187CP34231 750 aa1.98□□□□□ -2.09
VPS16YPL045W KTI12P34253 313 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W CAB3P36076 571 aa1.98□□□□□ -2.09
VPS16YPL045W RIB1P38066 345 aa1.98□□□□□ -2.09
VPS16YPL045W MAL32P38158 584 aa1.98□□□□□ -2.09
VPS16YPL045W MDM31P38880 579 aa1.98□□□□□ -2.09
VPS16YPL045W PEX22P39718 180 aa1.98□□□□□ -2.09
VPS16YPL045W HEM14P40012 539 aa1.98□□□□□ -2.09
VPS16YPL045W YAT2P40017 923 aa1.98□□□□□ -2.09
VPS16YPL045W YIL067CP40514 678 aa1.98□□□□□ -2.09
VPS16YPL045W YJL213WP40896 331 aa1.98□□□□□ -2.09
VPS16YPL045W RPL10P41805 221 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W HOC1P47124 396 aa1.98□□□□□ -2.09
VPS16YPL045W SCS3P53012 380 aa1.98□□□□□ -2.09
VPS16YPL045W VHT1P53241 593 aa1.98□□□□□ -2.09
VPS16YPL045W MAL12P53341 584 aa1.98□□□□□ -2.09
VPS16YPL045W MTQ1P53944 314 aa1.98□□□□□ -2.09
VPS16YPL045W BNA7Q04066 261 aa1.98□□□□□ -2.09
VPS16YPL045W DCR2Q05924 578 aa1.98□□□□□ -2.09
VPS16YPL045W MRX9Q07349 420 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W ESA1Q08649 445 aa1.98□□□□□ -2.09
VPS16YPL045W HNT3Q08702 217 aa1.98□□□□□ -2.09
VPS16YPL045W PLP2Q12017 286 aa1.98□□□□□ -2.09
VPS16YPL045W RRP42Q12277 265 aaPredicted RBP1.98□□□□□ -2.09
VPS16YPL045W ICT1Q12385 394 aa1.98□□□□□ -2.09
VPS16YPL045W YPR064WQ12492 139 aa1.98□□□□□ -2.09
VPS16YPL045W INO2P26798 304 aa1.98□□□□□ -2.09
VPS16YPL045W VMA6P32366 345 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W PDC2P32896 925 aa1.98□□□□□ -2.09
VPS16YPL045W SPT4P32914 102 aaPredicted RBP1.98□□□□□ -2.09
VPS16YPL045W RTC3P38804 111 aaPredicted RBP1.98□□□□□ -2.09
VPS16YPL045W PET8P38921 284 aa1.98□□□□□ -2.09
VPS16YPL045W YER184CP39961 794 aa1.98□□□□□ -2.09
VPS16YPL045W YIA6P40556 373 aa1.98□□□□□ -2.09
VPS16YPL045W IDP2P41939 412 aa1.98□□□□□ -2.09
VPS16YPL045W SAD1P43589 448 aa1.98□□□□□ -2.09
VPS16YPL045W RPC17P47076 161 aa1.98□□□□□ -2.09
VPS16YPL045W HAM1P47119 197 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W SHY1P53266 389 aa1.98□□□□□ -2.09
VPS16YPL045W CWC25P53854 179 aaKnown RBP1.98□□□□□ -2.09
VPS16YPL045W RIF2Q06208 395 aa1.98□□□□□ -2.09
VPS16YPL045W MFG1Q07684 458 aa1.98□□□□□ -2.09
VPS16YPL045W RSA1Q08932 381 aa1.98□□□□□ -2.09
VPS16YPL045W CSM4Q08955 156 aa1.98□□□□□ -2.09
VPS16YPL045W GET4Q12125 312 aa1.98□□□□□ -2.09
VPS16YPL045W MCT1Q12283 360 aa1.98□□□□□ -2.09
VPS16YPL045W MSI1P13712 422 aa1.97□□□□□ -2.09
VPS16YPL045W DEP1P31385 405 aa1.97□□□□□ -2.09
VPS16YPL045W RME1P32338 300 aaKnown RBP1.97□□□□□ -2.09
VPS16YPL045W MIC12P38341 106 aa1.97□□□□□ -2.09
VPS16YPL045W PTI1P39927 425 aaPredicted RBP1.97□□□□□ -2.09
VPS16YPL045W SMB1P40018 196 aaKnown RBP1.97□□□□□ -2.09
VPS16YPL045W EGT2P42835 1041 aa1.97□□□□□ -2.09
VPS16YPL045W MOB2P43563 287 aa1.97□□□□□ -2.09
VPS16YPL045W ASG7P46993 209 aa1.97□□□□□ -2.09
VPS16YPL045W AIM23P47015 356 aa1.97□□□□□ -2.09
VPS16YPL045W YPT32P51996 222 aaKnown RBP1.97□□□□□ -2.09
VPS16YPL045W PEX31P53203 462 aa1.97□□□□□ -2.09
VPS16YPL045W CUS2P53830 285 aaPredicted RBP1.97□□□□□ -2.09
VPS16YPL045W SEC13Q04491 297 aaKnown RBP1.97□□□□□ -2.09
VPS16YPL045W GAS2Q06135 555 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms