RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C GCN4P03069 281 aa3.62□□□□□ -1.83
SNF8YPL002C HEM4P06174 275 aa3.62□□□□□ -1.83
SNF8YPL002C ARG80P07249 177 aa3.62□□□□□ -1.83
SNF8YPL002C DSF1P0CX08 502 aa3.62□□□□□ -1.83
SNF8YPL002C YNR073CP0CX09 502 aa3.62□□□□□ -1.83
SNF8YPL002C RAP1P11938 827 aa3.62□□□□□ -1.83
SNF8YPL002C YAK1P14680 807 aa3.62□□□□□ -1.83
SNF8YPL002C HEM15P16622 393 aa3.62□□□□□ -1.83
SNF8YPL002C MDH1P17505 334 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SNF8YPL002C UTR1P21373 530 aa3.62□□□□□ -1.83
SNF8YPL002C HSP150P32478 413 aa3.62□□□□□ -1.83
SNF8YPL002C YME2P32843 850 aa3.62□□□□□ -1.83
SNF8YPL002C SPO23P33757 523 aa3.62□□□□□ -1.83
SNF8YPL002C MRPS5P33759 307 aa3.62□□□□□ -1.83
SNF8YPL002C YHL037CP38733 133 aa3.62□□□□□ -1.83
SNF8YPL002C PTH1P38876 190 aaKnown RBP3.62□□□□□ -1.83
SNF8YPL002C PEP8P40335 379 aa3.62□□□□□ -1.83
SNF8YPL002C ALG5P40350 334 aa3.62□□□□□ -1.83
SNF8YPL002C AVT7P40501 490 aa3.62□□□□□ -1.83
SNF8YPL002C AIM22P47051 409 aa3.62□□□□□ -1.83
SNF8YPL002C TPC1P53257 314 aa3.62□□□□□ -1.83
SNF8YPL002C GTR2P53290 341 aa3.62□□□□□ -1.83
SNF8YPL002C ARC35P53731 342 aaKnown RBP3.62□□□□□ -1.83
SNF8YPL002C YMR209CQ03648 457 aa3.62□□□□□ -1.83
SNF8YPL002C CAC2Q04199 468 aa3.62□□□□□ -1.83
SNF8YPL002C BUD22Q04347 519 aaKnown RBP3.62□□□□□ -1.83
SNF8YPL002C FMP42Q04991 504 aa3.62□□□□□ -1.83
SNF8YPL002C BUR2Q05949 395 aa3.62□□□□□ -1.83
SNF8YPL002C YPD1Q07688 167 aa3.62□□□□□ -1.83
SNF8YPL002C HNT3Q08702 217 aa3.62□□□□□ -1.83
SNF8YPL002C RPN5Q12250 445 aaKnown RBP3.62□□□□□ -1.83
SNF8YPL002C DET1Q99288 334 aaKnown RBP3.62□□□□□ -1.83
SNF8YPL002C RAD7P06779 565 aa3.61□□□□□ -1.83
SNF8YPL002C COS2P0CX12 379 aa3.61□□□□□ -1.83
SNF8YPL002C COS3P0CX13 379 aa3.61□□□□□ -1.83
SNF8YPL002C UNG1P12887 359 aa3.61□□□□□ -1.83
SNF8YPL002C CBS1P14066 229 aa3.61□□□□□ -1.83
SNF8YPL002C KGD1P20967 1014 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C YCL049CP25577 312 aa3.61□□□□□ -1.83
SNF8YPL002C PBN1P25580 416 aa3.61□□□□□ -1.83
SNF8YPL002C YKL187CP34231 750 aa3.61□□□□□ -1.83
SNF8YPL002C CAF4P36130 643 aa3.61□□□□□ -1.83
SNF8YPL002C ADH5P38113 351 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C ATG7P38862 630 aa3.61□□□□□ -1.83
SNF8YPL002C SHO1P40073 367 aa3.61□□□□□ -1.83
SNF8YPL002C YER137CP40083 148 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C PRE6P40303 254 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C COA1P40452 197 aa3.61□□□□□ -1.83
SNF8YPL002C COS4P43542 379 aa3.61□□□□□ -1.83
SNF8YPL002C OTU1P43558 301 aa3.61□□□□□ -1.83
SNF8YPL002C LSM1P47017 172 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C HAM1P47119 197 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C RHO4Q00246 291 aa3.61□□□□□ -1.83
SNF8YPL002C MRPL13Q02204 264 aa3.61□□□□□ -1.83
SNF8YPL002C NCE101Q02820 53 aa3.61□□□□□ -1.83
SNF8YPL002C SRL4Q03085 281 aa3.61□□□□□ -1.83
SNF8YPL002C PAL1Q05518 499 aaKnown RBP3.61□□□□□ -1.83
SNF8YPL002C YLR173WQ06247 608 aa3.61□□□□□ -1.83
SNF8YPL002C YLR413WQ06689 675 aa3.61□□□□□ -1.83
SNF8YPL002C LUC7Q07508 261 aaPredicted RBP3.61□□□□□ -1.83
SNF8YPL002C COS7Q07788 383 aa3.61□□□□□ -1.83
SNF8YPL002C TMC1Q08422 150 aaPredicted RBP3.61□□□□□ -1.83
SNF8YPL002C GPN2Q08726 347 aaPredicted RBP3.61□□□□□ -1.83
SNF8YPL002C FRE3Q08905 711 aa3.61□□□□□ -1.83
SNF8YPL002C DST1P07273 309 aa3.6□□□□□ -1.83
SNF8YPL002C CDC10P25342 322 aaKnown RBP3.6□□□□□ -1.83
SNF8YPL002C UTP11P34247 250 aaPredicted RBP3.6□□□□□ -1.83
SNF8YPL002C CHK1P38147 527 aa3.6□□□□□ -1.83
SNF8YPL002C GDT1P38301 280 aaPredicted RBP3.6□□□□□ -1.83
SNF8YPL002C WSS1P38838 269 aa3.6□□□□□ -1.83
SNF8YPL002C RCY1P39531 840 aa3.6□□□□□ -1.83
SNF8YPL002C AIM2P39721 246 aa3.6□□□□□ -1.83
SNF8YPL002C ECM10P39987 644 aa3.6□□□□□ -1.83
SNF8YPL002C YER010CP40011 234 aa3.6□□□□□ -1.83
SNF8YPL002C YER085CP40058 173 aa3.6□□□□□ -1.83
SNF8YPL002C CIN5P40917 295 aa3.6□□□□□ -1.83
SNF8YPL002C AIF1P52923 378 aa3.6□□□□□ -1.83
SNF8YPL002C SSU72P53538 206 aaPredicted RBP3.6□□□□□ -1.83
SNF8YPL002C MPP6P53725 186 aaPredicted RBP3.6□□□□□ -1.83
SNF8YPL002C SHR3Q02774 210 aa3.6□□□□□ -1.83
SNF8YPL002C YML108WQ03759 105 aa3.6□□□□□ -1.83
SNF8YPL002C YLR281CQ05863 155 aa3.6□□□□□ -1.83
SNF8YPL002C VPS74Q06385 345 aa3.6□□□□□ -1.83
SNF8YPL002C YDL114WQ07530 308 aa3.6□□□□□ -1.83
SNF8YPL002C YDL109CQ12103 647 aa3.6□□□□□ -1.83
SNF8YPL002C CBP2P03874 630 aaPredicted RBP3.59□□□□□ -1.83
SNF8YPL002C CDC23P16522 626 aa3.59□□□□□ -1.83
SNF8YPL002C MCK1P21965 375 aaKnown RBP3.59□□□□□ -1.83
SNF8YPL002C CTR86P25355 563 aa3.59□□□□□ -1.83
SNF8YPL002C YME1P32795 747 aa3.59□□□□□ -1.83
SNF8YPL002C MRPL39P36533 70 aa3.59□□□□□ -1.83
SNF8YPL002C PHO89P38361 574 aa3.59□□□□□ -1.83
SNF8YPL002C SSO2P39926 295 aa3.59□□□□□ -1.83
SNF8YPL002C YIL012WP40551 113 aa3.59□□□□□ -1.83
SNF8YPL002C IDP2P41939 412 aa3.59□□□□□ -1.83
SNF8YPL002C YNL320WP42840 284 aa3.59□□□□□ -1.83
SNF8YPL002C AAD10P47182 288 aa3.59□□□□□ -1.83
SNF8YPL002C GTO1P48239 356 aa3.59□□□□□ -1.83
SNF8YPL002C TAF6P53040 516 aa3.59□□□□□ -1.83
SNF8YPL002C CDH1P53197 566 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms