RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C TFS1P14306 219 aa3.78□□□□□ -1.8
VHS3YOR054C STE4P18851 423 aa3.78□□□□□ -1.8
VHS3YOR054C PRE7P23724 241 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C PEX4P29340 183 aa3.78□□□□□ -1.8
VHS3YOR054C ERG1P32476 496 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C YEF1P32622 495 aa3.78□□□□□ -1.8
VHS3YOR054C MGM101P32787 269 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C NTF2P33331 125 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C MTC2P34246 357 aa3.78□□□□□ -1.8
VHS3YOR054C CTF13P35203 478 aa3.78□□□□□ -1.8
VHS3YOR054C ADD66P36040 267 aa3.78□□□□□ -1.8
VHS3YOR054C AXL2P38928 823 aa3.78□□□□□ -1.8
VHS3YOR054C SSU1P41930 458 aa3.78□□□□□ -1.8
VHS3YOR054C BUL1P48524 976 aa3.78□□□□□ -1.8
VHS3YOR054C ASN1P49089 572 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C YGL101WP53144 215 aa3.78□□□□□ -1.8
VHS3YOR054C COG7P53195 279 aa3.78□□□□□ -1.8
VHS3YOR054C HOL1P53389 586 aa3.78□□□□□ -1.8
VHS3YOR054C YDR366CP87287 132 aa3.78□□□□□ -1.8
VHS3YOR054C SKY1Q03656 742 aa3.78□□□□□ -1.8
VHS3YOR054C YMR253CQ04835 414 aa3.78□□□□□ -1.8
VHS3YOR054C YLR346CQ06139 101 aa3.78□□□□□ -1.8
VHS3YOR054C POM33Q12164 279 aa3.78□□□□□ -1.8
VHS3YOR054C INP53Q12271 1107 aa3.78□□□□□ -1.8
VHS3YOR054C AHA1Q12449 350 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C PRM4Q12498 284 aa3.78□□□□□ -1.8
VHS3YOR054C LAA1P39526 2014 aa3.78□□□□□ -1.8
VHS3YOR054C RPP2AP05319 106 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C HAP2P06774 265 aa3.78□□□□□ -1.8
VHS3YOR054C DST1P07273 309 aa3.78□□□□□ -1.8
VHS3YOR054C PUT1P09368 476 aa3.78□□□□□ -1.8
VHS3YOR054C YML003WP0CF16 290 aa3.78□□□□□ -1.8
VHS3YOR054C AMD1P15274 810 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C YCR099CP25657 155 aa3.78□□□□□ -1.8
VHS3YOR054C TCA17P32613 152 aa3.78□□□□□ -1.8
VHS3YOR054C SHE2P36068 246 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VHS3YOR054C MRPL11P36521 249 aaPredicted RBP3.78□□□□□ -1.8
VHS3YOR054C YBR284WP38150 797 aa3.78□□□□□ -1.8
VHS3YOR054C RRN10P38204 145 aa3.78□□□□□ -1.8
VHS3YOR054C FAT1P38225 669 aa3.78□□□□□ -1.8
VHS3YOR054C YBR096WP38256 230 aa3.78□□□□□ -1.8
VHS3YOR054C YPT31P38555 223 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C ARO9P38840 513 aaPredicted RBP3.78□□□□□ -1.8
VHS3YOR054C SSN3P39073 555 aa3.78□□□□□ -1.8
VHS3YOR054C EMC5P40540 141 aa3.78□□□□□ -1.8
VHS3YOR054C CAT5P41735 233 aa3.78□□□□□ -1.8
VHS3YOR054C IME4P41833 600 aa3.78□□□□□ -1.8
VHS3YOR054C PFS2P42841 465 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C LSB3P43603 459 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C ALK1P43633 760 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C YJR011CP47086 261 aaPredicted RBP3.78□□□□□ -1.8
VHS3YOR054C MRX6P48564 524 aa3.78□□□□□ -1.8
VHS3YOR054C MDM34P53083 459 aa3.78□□□□□ -1.8
VHS3YOR054C BUD17P53727 317 aa3.78□□□□□ -1.8
VHS3YOR054C AAH1P53909 347 aa3.78□□□□□ -1.8
VHS3YOR054C NRK1P53915 240 aa3.78□□□□□ -1.8
VHS3YOR054C RHO3Q00245 231 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C APM1Q00776 475 aaPredicted RBP3.78□□□□□ -1.8
VHS3YOR054C YPL014WQ02606 381 aa3.78□□□□□ -1.8
VHS3YOR054C NUP100Q02629 959 aa3.78□□□□□ -1.8
VHS3YOR054C YDC1Q02896 317 aa3.78□□□□□ -1.8
VHS3YOR054C FIT1Q04433 528 aa3.78□□□□□ -1.8
VHS3YOR054C RNH202Q05635 350 aa3.78□□□□□ -1.8
VHS3YOR054C HRD3Q05787 833 aa3.78□□□□□ -1.8
VHS3YOR054C YPL257WQ08974 193 aa3.78□□□□□ -1.8
VHS3YOR054C GPM2Q12008 311 aa3.78□□□□□ -1.8
VHS3YOR054C YTM1Q12024 460 aaPredicted RBP3.78□□□□□ -1.8
VHS3YOR054C YPR027CQ12079 277 aa3.78□□□□□ -1.8
VHS3YOR054C DAP1Q12091 152 aa3.78□□□□□ -1.8
VHS3YOR054C NDJ1Q12366 352 aa3.78□□□□□ -1.8
VHS3YOR054C YLR099W-AQ3E798 87 aa3.78□□□□□ -1.8
VHS3YOR054C AI3P03877 415 aa3.77□□□□□ -1.81
VHS3YOR054C RPS31P05759 152 aaKnown RBP3.77□□□□□ -1.81
VHS3YOR054C HTS1P07263 546 aaKnown RBP3.77□□□□□ -1.81
VHS3YOR054C HAP3P13434 144 aa3.77□□□□□ -1.81
VHS3YOR054C BUD5P25300 642 aaPredicted RBP3.77□□□□□ -1.81
VHS3YOR054C COT1P32798 439 aa3.77□□□□□ -1.81
VHS3YOR054C TGL1P34163 548 aa3.77□□□□□ -1.81
VHS3YOR054C RMA1P36001 430 aaKnown RBP3.77□□□□□ -1.81
VHS3YOR054C TCD2P36101 447 aaKnown RBP3.77□□□□□ -1.81
VHS3YOR054C JHD1P40034 492 aa3.77□□□□□ -1.81
VHS3YOR054C PAU15P40585 124 aa3.77□□□□□ -1.81
VHS3YOR054C POP1P41812 875 aa3.77□□□□□ -1.81
VHS3YOR054C ZIM17P42844 174 aa3.77□□□□□ -1.81
VHS3YOR054C MOB2P43563 287 aa3.77□□□□□ -1.81
VHS3YOR054C OST3P48439 350 aa3.77□□□□□ -1.81
VHS3YOR054C BOL2P53082 120 aa3.77□□□□□ -1.81
VHS3YOR054C NSA1P53136 463 aaPredicted RBP3.77□□□□□ -1.81
VHS3YOR054C YGR017WP53210 297 aa3.77□□□□□ -1.81
VHS3YOR054C YGR042WP53227 271 aa3.77□□□□□ -1.81
VHS3YOR054C SLX9P53251 210 aaPredicted RBP3.77□□□□□ -1.81
VHS3YOR054C YGR151CP53287 111 aa3.77□□□□□ -1.81
VHS3YOR054C TNA1P53322 534 aa3.77□□□□□ -1.81
VHS3YOR054C IGO1P53897 168 aa3.77□□□□□ -1.81
VHS3YOR054C CDC14Q00684 551 aa3.77□□□□□ -1.81
VHS3YOR054C YAP6Q03935 383 aa3.77□□□□□ -1.81
VHS3YOR054C HED1Q03937 162 aa3.77□□□□□ -1.81
VHS3YOR054C YDR415CQ04033 374 aaPredicted RBP3.77□□□□□ -1.81
VHS3YOR054C SSL1Q04673 461 aaPredicted RBP3.77□□□□□ -1.81
VHS3YOR054C AIM32Q04689 311 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms