RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W YLR446WQ06204 433 aa3.42□□□□□ -1.86
ROD1YOR018W MDM36Q06820 579 aa3.42□□□□□ -1.86
ROD1YOR018W THP3Q12049 470 aaKnown RBP3.42□□□□□ -1.86
ROD1YOR018W MCP1Q12106 302 aa3.42□□□□□ -1.86
ROD1YOR018W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
ROD1YOR018W RLM1Q12224 676 aa3.42□□□□□ -1.86
ROD1YOR018W FLO9P39712 1322 aa3.42□□□□□ -1.86
ROD1YOR018W HOM3P10869 527 aa3.41□□□□□ -1.86
ROD1YOR018W TAL1P15019 335 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W MDH1P17505 334 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
ROD1YOR018W PTC6P25646 442 aa3.41□□□□□ -1.86
ROD1YOR018W IFA38P38286 347 aa3.41□□□□□ -1.86
ROD1YOR018W NAB3P38996 802 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
ROD1YOR018W YER010CP40011 234 aa3.41□□□□□ -1.86
ROD1YOR018W ECO1P43605 281 aa3.41□□□□□ -1.86
ROD1YOR018W YIP4P53093 235 aa3.41□□□□□ -1.86
ROD1YOR018W BUD25P85052 153 aa3.41□□□□□ -1.86
ROD1YOR018W URC2Q04411 772 aa3.41□□□□□ -1.86
ROD1YOR018W SEC13Q04491 297 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W DCR2Q05924 578 aa3.41□□□□□ -1.86
ROD1YOR018W NEJ1Q06148 342 aa3.41□□□□□ -1.86
ROD1YOR018W CTS2Q06350 511 aa3.41□□□□□ -1.86
ROD1YOR018W YLR352WQ06479 807 aa3.41□□□□□ -1.86
ROD1YOR018W YLR099W-AQ3E798 87 aa3.41□□□□□ -1.86
ROD1YOR018W ADK1P07170 222 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W PRB1P09232 635 aa3.41□□□□□ -1.86
ROD1YOR018W RPA135P22138 1203 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W SCO1P23833 295 aa3.41□□□□□ -1.86
ROD1YOR018W ASF2P32448 525 aaPredicted RBP3.41□□□□□ -1.86
ROD1YOR018W NPL6P32832 435 aa3.41□□□□□ -1.86
ROD1YOR018W YHK8P38776 514 aa3.41□□□□□ -1.86
ROD1YOR018W MTC6P38849 526 aa3.41□□□□□ -1.86
ROD1YOR018W NVJ1P38881 321 aa3.41□□□□□ -1.86
ROD1YOR018W PHO90P39535 881 aa3.41□□□□□ -1.86
ROD1YOR018W IES5P40060 125 aa3.41□□□□□ -1.86
ROD1YOR018W RFC4P40339 323 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W ATF1P40353 525 aa3.41□□□□□ -1.86
ROD1YOR018W SDP1P40479 209 aa3.41□□□□□ -1.86
ROD1YOR018W REE1P40893 198 aa3.41□□□□□ -1.86
ROD1YOR018W PFS2P42841 465 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W CIN2P46670 268 aa3.41□□□□□ -1.86
ROD1YOR018W ADO1P47143 340 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W RHO5P53879 331 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W SCS7Q03529 384 aa3.41□□□□□ -1.86
ROD1YOR018W YEH1Q07804 573 aa3.41□□□□□ -1.86
ROD1YOR018W RDL2Q08742 149 aaKnown RBP3.41□□□□□ -1.86
ROD1YOR018W YOR214CQ12282 236 aa3.41□□□□□ -1.86
ROD1YOR018W YLR122CQ12312 125 aa3.41□□□□□ -1.86
ROD1YOR018W HSP42Q12329 375 aa3.41□□□□□ -1.86
ROD1YOR018W PCL9Q12477 304 aa3.41□□□□□ -1.86
ROD1YOR018W YAL064W-BO13512 126 aa3.4□□□□□ -1.86
ROD1YOR018W RPL5P26321 297 aaKnown RBP3.4□□□□□ -1.86
ROD1YOR018W FUN26P31381 517 aa3.4□□□□□ -1.86
ROD1YOR018W SEC66P33754 206 aa3.4□□□□□ -1.86
ROD1YOR018W SDS22P36047 338 aa3.4□□□□□ -1.86
ROD1YOR018W YKL071WP36086 256 aa3.4□□□□□ -1.86
ROD1YOR018W KAE1P36132 386 aa3.4□□□□□ -1.86
ROD1YOR018W DTR1P38125 572 aa3.4□□□□□ -1.86
ROD1YOR018W PAU24P38155 120 aa3.4□□□□□ -1.86
ROD1YOR018W CCZ1P38273 704 aa3.4□□□□□ -1.86
ROD1YOR018W YBR137WP38276 179 aa3.4□□□□□ -1.86
ROD1YOR018W UBS1P38290 277 aa3.4□□□□□ -1.86
ROD1YOR018W YLF2P38746 405 aa3.4□□□□□ -1.86
ROD1YOR018W YEL057CP39983 233 aa3.4□□□□□ -1.86
ROD1YOR018W JLP2P40206 208 aa3.4□□□□□ -1.86
ROD1YOR018W GZF3P42944 551 aaKnown RBP3.4□□□□□ -1.86
ROD1YOR018W IDS2P46958 469 aa3.4□□□□□ -1.86
ROD1YOR018W MKC7P53379 596 aa3.4□□□□□ -1.86
ROD1YOR018W OGG1P53397 376 aaPredicted RBP3.4□□□□□ -1.86
ROD1YOR018W PET191Q02772 108 aa3.4□□□□□ -1.86
ROD1YOR018W SDC1Q03323 175 aa3.4□□□□□ -1.86
ROD1YOR018W YMR315WQ04869 349 aaKnown RBP3.4□□□□□ -1.86
ROD1YOR018W NGL1Q08213 363 aaKnown RBP3.4□□□□□ -1.86
ROD1YOR018W MED2Q12124 431 aa3.4□□□□□ -1.86
ROD1YOR018W PAR32Q12515 295 aaKnown RBP3.4□□□□□ -1.86
ROD1YOR018W Q0142Q9ZZW4 58 aa3.4□□□□□ -1.86
ROD1YOR018W GIT1P25346 518 aa3.4□□□□□ -1.87
ROD1YOR018W PUT3P25502 979 aaPredicted RBP3.4□□□□□ -1.87
ROD1YOR018W PRE4P30657 266 aa3.4□□□□□ -1.87
ROD1YOR018W TIR3P40552 269 aa3.4□□□□□ -1.87
ROD1YOR018W LYS20P48570 428 aaKnown RBP3.4□□□□□ -1.87
ROD1YOR018W YGL101WP53144 215 aa3.4□□□□□ -1.87
ROD1YOR018W YDR514CQ04408 483 aa3.4□□□□□ -1.87
ROD1YOR018W RNH1Q04740 348 aa3.4□□□□□ -1.87
ROD1YOR018W LYS21Q12122 440 aaKnown RBP3.4□□□□□ -1.87
ROD1YOR018W YHR214C-EQ8TGK0 99 aa3.4□□□□□ -1.87
ROD1YOR018W SIR2P06700 562 aa3.39□□□□□ -1.87
ROD1YOR018W PHO80P20052 293 aa3.39□□□□□ -1.87
ROD1YOR018W AIM17P23180 465 aaKnown RBP3.39□□□□□ -1.87
ROD1YOR018W CLB2P24869 491 aa3.39□□□□□ -1.87
ROD1YOR018W CDC39P25655 2108 aaKnown RBP3.39□□□□□ -1.87
ROD1YOR018W FUN19P28003 413 aaPredicted RBP3.39□□□□□ -1.87
ROD1YOR018W RPC34P32910 317 aa3.39□□□□□ -1.87
ROD1YOR018W CHK1P38147 527 aa3.39□□□□□ -1.87
ROD1YOR018W MNN5P46982 586 aa3.39□□□□□ -1.87
ROD1YOR018W MRH4P53166 561 aa3.39□□□□□ -1.87
ROD1YOR018W YGR054WP53235 642 aaKnown RBP3.39□□□□□ -1.87
ROD1YOR018W MNT4P53745 580 aa3.39□□□□□ -1.87
ROD1YOR018W PFA5Q03289 374 aa3.39□□□□□ -1.87
ROD1YOR018W SSY1Q03770 852 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms