RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	CSM1	P25651	190 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	NUP2	P32499	720 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	OM14	P38325	134 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	RCK1	P38622	512 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	YNL208W	P40159	199 aa	Known RBP	4.14	□□□□□ -1.75
PCL1	YNL289W	POP1	P41812	875 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	ALB1	P47019	175 aa	Predicted RBP	4.14	□□□□□ -1.75
PCL1	YNL289W	PAC10	P48363	199 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	ATP22	P50273	684 aa	Predicted RBP	4.14	□□□□□ -1.75
PCL1	YNL289W	YNL033W	P53964	284 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	YNL019C	P53975	284 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	YPL107W	Q02873	248 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	YMR102C	Q03177	834 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	YLL007C	Q07799	665 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	RRP36	Q12481	300 aa	Predicted RBP	4.14	□□□□□ -1.75
PCL1	YNL289W	MER1	P16523	270 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	HSP150	P32478	413 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	TDA11	P38854	504 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	SER3	P40054	469 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	TOS2	P50078	622 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	KEL2	P50090	882 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	GOR1	P53839	350 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	IGO1	P53897	168 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	GGA1	Q06336	557 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	YPL225W	Q08971	146 aa	Known RBP	4.13	□□□□□ -1.75
PCL1	YNL289W	TMS1	Q12116	473 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	NSL1	Q12143	216 aa		4.13	□□□□□ -1.75
PCL1	YNL289W	TIM9	O74700	87 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	ZWF1	P11412	505 aa	Known RBP	4.12	□□□□□ -1.75
PCL1	YNL289W	DPH5	P32469	300 aa	Predicted RBP	4.12	□□□□□ -1.75
PCL1	YNL289W	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
PCL1	YNL289W	GLC7	P32598	312 aa	Known RBP	4.12	□□□□□ -1.75
PCL1	YNL289W	VPS51	P36116	164 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	ZTA1	P38230	334 aa	Known RBP	4.12	□□□□□ -1.75
PCL1	YNL289W	ECM34	P38728	170 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	YIL067C	P40514	678 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	TWF1	P53250	332 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	CAF40	P53829	373 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	SUR7	P54003	302 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	YDR209C	Q03480	137 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	ACL4	Q03771	387 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	BCP1	Q06338	283 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	YPR091C	Q06833	770 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	MUM3	Q08750	479 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	FDH1	Q08911	376 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	MDM32	Q12171	622 aa		4.12	□□□□□ -1.75
PCL1	YNL289W	IPP1	P00817	287 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	YCR102C	P25608	368 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	PDX3	P38075	228 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	MNN9	P39107	395 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	PTI1	P39927	425 aa	Predicted RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	AST2	P39945	430 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	YFR054C	P43622	192 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	SEH1	P53011	349 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	MIG2	P53035	382 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	MTQ1	P53944	314 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	YDR541C	Q03049	344 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	MMT1	Q03218	510 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	NAT4	Q04751	285 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	YOL024W	Q08172	172 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	THP3	Q12049	470 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	ERV2	Q12284	196 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	WTM1	Q12363	437 aa	Known RBP	4.11	□□□□□ -1.75
PCL1	YNL289W	PSF1	Q12488	208 aa		4.11	□□□□□ -1.75
PCL1	YNL289W	RAD7	P06779	565 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	CTA1	P15202	515 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	RSM22	P36056	628 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PCL1	YNL289W	ISC1	P40015	477 aa	Known RBP	4.1	□□□□□ -1.75
PCL1	YNL289W	MPM1	P40364	252 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	RPS12	P48589	143 aa	Known RBP	4.1	□□□□□ -1.75
PCL1	YNL289W	GET1	P53192	235 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	COS6	P53344	381 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	OGG1	P53397	376 aa	Predicted RBP	4.1	□□□□□ -1.75
PCL1	YNL289W	SPR6	Q01684	191 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	SKI8	Q02793	397 aa	Predicted RBP	4.1	□□□□□ -1.75
PCL1	YNL289W	SWP1	Q02795	286 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	SPC24	Q04477	213 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	PAL1	Q05518	499 aa	Known RBP	4.1	□□□□□ -1.75
PCL1	YNL289W	GPI11	Q06636	219 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	MFG1	Q07684	458 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	COS7	Q07788	383 aa		4.1	□□□□□ -1.75
PCL1	YNL289W	RPL24A	P04449	155 aa	Known RBP	4.09	□□□□□ -1.75
PCL1	YNL289W	GAL3	P13045	520 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	REC107	P21651	314 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	CLB3	P24870	427 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	PEX3	P28795	441 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	NTG1	P31378	399 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	GDH2	P33327	1092 aa	Known RBP	4.09	□□□□□ -1.75
PCL1	YNL289W	SEC66	P33754	206 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	SKG1	P36169	355 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	RIB1	P38066	345 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	FZO1	P38297	855 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	ECO1	P43605	281 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	RPE1	P46969	238 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	POP6	P53218	158 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	SPC2	Q04969	178 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	ARV1	Q06541	321 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	YPR172W	Q06608	200 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	YDL199C	Q12407	687 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 94.6 ms