RNA–Protein interactions for RNA: YNL076W

MKS1, Transcript of Pleiotropic negative transcriptional regulator, yeast

Gene MKS1, Length 1,755 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MKS1	YNL076W	YGR042W	P53227	271 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	SUR7	P54003	302 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	VPS60	Q03390	229 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	OST6	Q03723	332 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	NAT4	Q04751	285 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	NDE2	Q07500	545 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	LDB18	Q07887	179 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	YEH2	Q07950	538 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	PLB3	Q08108	686 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	LDS2	Q08218	356 aa		4.38	□□□□□ -1.71
MKS1	YNL076W	LSO2	Q3E772	92 aa	Known RBP	4.38	□□□□□ -1.71
MKS1	YNL076W	ARF1	P11076	181 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	SCL1	P21243	252 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	AEP1	P32493	518 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	CDC13	P32797	924 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	SWD2	P36104	329 aa	Predicted RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	CBP4	P37267	147 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	YBP1	P38315	674 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	PCL5	P38794	229 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	CYC2	P38909	366 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	YKE4	P40544	346 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	BUD13	P46947	266 aa	Predicted RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	HOC1	P47124	396 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	VMA10	P48836	114 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	UBP8	P50102	471 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	YPT32	P51996	222 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	GND2	P53319	492 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	MKC7	P53379	596 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	CDC14	Q00684	551 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	SED5	Q01590	340 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	AAT1	Q01802	451 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	GIP3	Q03016	1276 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	MMT1	Q03218	510 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	YDL086W	Q07505	273 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	CSM4	Q08955	156 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	YDR157W	A0A023PZE8	133 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	IPP1	P00817	287 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	RPB8	P20436	146 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	CHA1	P25379	360 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	RFA3	P26755	122 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	FUN19	P28003	413 aa	Predicted RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	ACB1	P31787	87 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	MRPS5	P33759	307 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	IKI1	P38874	309 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	SHO1	P40073	367 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	IDP2	P41939	412 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	BIR1	P47134	954 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	YNL140C	P53910	189 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	ERG13	P54839	491 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	YDC1	Q02896	317 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	TRS23	Q03784	219 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	DIC1	Q06143	298 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	PBP4	Q07362	185 aa	Known RBP	4.37	□□□□□ -1.71
MKS1	YNL076W	PFA4	Q12006	378 aa		4.37	□□□□□ -1.71
MKS1	YNL076W	PTP1	P25044	335 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	YCR006C	P25350	157 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	MRPL9	P31334	269 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	SKN1	P33336	771 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	MSN2	P33748	704 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	CAF4	P36130	643 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	SEO1	P39709	593 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	DDI1	P40087	428 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	SYG1	P40528	902 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	CIN5	P40917	295 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	YGR210C	P42942	411 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	NAS6	P50086	228 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	OKP1	P53298	406 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	YIF1	P53845	314 aa	Known RBP	4.36	□□□□□ -1.71
MKS1	YNL076W	RSM10	Q03201	203 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	PLM2	Q04383	521 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	SPC24	Q04477	213 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	SNT309	Q06091	175 aa	Predicted RBP	4.36	□□□□□ -1.71
MKS1	YNL076W	YPR147C	Q06522	304 aa	Known RBP	4.36	□□□□□ -1.71
MKS1	YNL076W	YLL056C	Q12177	298 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	Q0010	Q9ZZX9	128 aa		4.36	□□□□□ -1.71
MKS1	YNL076W	ATP6	P00854	259 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	TYR1	P20049	452 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	SLY1	P22213	666 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	RNA15	P25299	296 aa	Predicted RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	NAM9	P27929	486 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	GDA1	P32621	518 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	APL3	P38065	1025 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	PRS2	P38620	318 aa	Known RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	LYS1	P38998	373 aa	RIP-Chip data	4.35	□□□□□ -1.71	not detected
MKS1	YNL076W	NPT1	P39683	429 aa	Known RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	FRT2	P39734	528 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	YAT2	P40017	923 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	FAU1	P40099	211 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	IRC7	P43623	340 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	UBC11	P52492	156 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	DUG3	P53871	357 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	PRP38	Q00723	242 aa	Predicted RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	YDR209C	Q03480	137 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	TPT1	Q12272	230 aa	Known RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	ATG34	Q12292	412 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	YKL033W-A	Q86ZR7	236 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	RAD10	P06838	210 aa		4.35	□□□□□ -1.71
MKS1	YNL076W	CPA1	P07258	411 aa	Known RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	MRP2	P10663	115 aa	Predicted RBP	4.35	□□□□□ -1.71
MKS1	YNL076W	SAC1	P32368	623 aa	Known RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms