RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	BIG1	P38813	335 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	YHR177W	P38867	453 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	PTI1	P39927	425 aa	Predicted RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	YEL068C	P39977	110 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	PFS2	P42841	465 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	BNA6	P43619	295 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	ALB1	P47019	175 aa	Predicted RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	PAC10	P48363	199 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	POP6	P53218	158 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	ZRG17	P53735	605 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	EMI2	Q04409	500 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	RRP45	Q05636	305 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	BUR2	Q05949	395 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	YLR173W	Q06247	608 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	SSK1	Q07084	712 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	NDD1	Q08887	554 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	FEX2	Q08991	375 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	YOR283W	Q12040	230 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	LEU9	Q12166	604 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	YOL107W	Q12239	342 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	PST1	Q12355	444 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	PSF1	Q12488	208 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	MTR10	Q99189	972 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	YEL009C-A	A0A023PZF2	135 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	SIR2	P06700	562 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	RPC40	P07703	335 aa	Known RBP	4.79	□□□□□ -1.64
CTR3	YLR411W	NHP6B	P11633	99 aa	Known RBP	4.79	□□□□□ -1.64
CTR3	YLR411W	PET9	P18239	318 aa	Known RBP	4.79	□□□□□ -1.64
CTR3	YLR411W	PHO80	P20052	293 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	EPT1	P22140	391 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CTR3	YLR411W	NDC1	P32500	655 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	GCS1	P35197	352 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	AUR1	P36107	401 aa	Predicted RBP	4.79	□□□□□ -1.64
CTR3	YLR411W	YPT35	P38815	214 aa	Known RBP	4.79	□□□□□ -1.64
CTR3	YLR411W	GGC1	P38988	300 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	YJL068C	P40363	299 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	COS10	P52924	374 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	ERG26	P53199	349 aa	Known RBP	4.79	□□□□□ -1.64
CTR3	YLR411W	SNZ1	Q03148	297 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	PIR1	Q03178	341 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	PRM15	Q03262	622 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	SPC19	Q03954	165 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	RNH202	Q05635	350 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	IPK1	Q06667	281 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	YPL272C	Q08984	517 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	BSC1	Q12140	328 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	APC2	Q12440	853 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	PCL9	Q12477	304 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	YBR298C-A	Q8TGK4	73 aa		4.79	□□□□□ -1.64
CTR3	YLR411W	HIS3	P06633	220 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	STE7	P06784	515 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	YOL163W	P0CF20	169 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	DSF1	P0CX08	502 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	YNR073C	P0CX09	502 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	DPM1	P14020	267 aa	Known RBP	4.78	□□□□□ -1.64
CTR3	YLR411W	CDC23	P16522	626 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	YCK1	P23291	538 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	ADK2	P26364	225 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	YIM1	P28625	365 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
CTR3	YLR411W	ZTA1	P38230	334 aa	Known RBP	4.78	□□□□□ -1.64
CTR3	YLR411W	RRF1	P38771	230 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	RRP4	P38792	359 aa	Known RBP	4.78	□□□□□ -1.64
CTR3	YLR411W	YHR127W	P38833	243 aa	Known RBP	4.78	□□□□□ -1.64
CTR3	YLR411W	AIM10	P39965	576 aa	Known RBP	4.78	□□□□□ -1.64
CTR3	YLR411W	ATG27	P46989	271 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	HAM1	P47119	197 aa	Known RBP	4.78	□□□□□ -1.64
CTR3	YLR411W	ERV29	P53337	310 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	FRE4	P53746	719 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	YLR352W	Q06479	807 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	MRPL35	Q06678	367 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	GRC3	Q07845	632 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	RDR1	Q08904	546 aa		4.78	□□□□□ -1.64
CTR3	YLR411W	PEP4	P07267	405 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	ZWF1	P11412	505 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	RPL3	P14126	387 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	TRX3	P25372	127 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	YCR102C	P25608	368 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	ERG9	P29704	444 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	SNC1	P31109	117 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	LHP1	P33399	275 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	TMA19	P35691	167 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	IML3	P38265	245 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	INM1	P38710	295 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	ALP1	P38971	573 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	GDI1	P39958	451 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	YMR144W	P40214	342 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	NUP57	P48837	541 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	PYK2	P52489	506 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	SDT1	P53078	280 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	SWC4	P53201	476 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	DBP6	P53734	629 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	RPL6A	Q02326	176 aa	Known RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	MSS11	Q03825	758 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	ELP6	Q04868	273 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	COX20	Q04935	205 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	YLR036C	Q07986	203 aa		4.77	□□□□□ -1.65
CTR3	YLR411W	SYC1	Q08553	188 aa	Predicted RBP	4.77	□□□□□ -1.65
CTR3	YLR411W	YOR387C	Q08910	206 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms