RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W FYV6P53913 173 aa3.25□□□□□ -1.89
LCB5YLR260W APM1Q00776 475 aaPredicted RBP3.25□□□□□ -1.89
LCB5YLR260W OSH6Q02201 448 aa3.25□□□□□ -1.89
LCB5YLR260W RNY1Q02933 434 aaKnown RBP3.25□□□□□ -1.89
LCB5YLR260W OST6Q03723 332 aa3.25□□□□□ -1.89
LCB5YLR260W SMP3Q04174 516 aa3.25□□□□□ -1.89
LCB5YLR260W YLR224WQ05947 369 aa3.25□□□□□ -1.89
LCB5YLR260W NDE2Q07500 545 aa3.25□□□□□ -1.89
LCB5YLR260W RPN8Q08723 338 aaKnown RBP3.25□□□□□ -1.89
LCB5YLR260W NCE102Q12207 173 aaRIP-Chip data3.25□□□□□ -1.89not detected
LCB5YLR260W RUP1Q12242 671 aa3.25□□□□□ -1.89
LCB5YLR260W PNS1Q12412 539 aa3.25□□□□□ -1.89
LCB5YLR260W RGS2Q99188 309 aa3.25□□□□□ -1.89
LCB5YLR260W CMD1P06787 147 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W PEP4P07267 405 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W RPL12AP0CX53 165 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W RPL12BP0CX54 165 aa3.24□□□□□ -1.89
LCB5YLR260W STE4P18851 423 aa3.24□□□□□ -1.89
LCB5YLR260W RFA3P26755 122 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W IDH1P28834 360 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
LCB5YLR260W HRR25P29295 494 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W LOS1P33418 1100 aaPredicted RBP3.24□□□□□ -1.89
LCB5YLR260W ELF1P36053 145 aa3.24□□□□□ -1.89
LCB5YLR260W IRC24P40580 263 aa3.24□□□□□ -1.89
LCB5YLR260W RTS2P40962 232 aa3.24□□□□□ -1.89
LCB5YLR260W BIR1P47134 954 aa3.24□□□□□ -1.89
LCB5YLR260W ORM1P53224 222 aa3.24□□□□□ -1.89
LCB5YLR260W OKP1P53298 406 aa3.24□□□□□ -1.89
LCB5YLR260W PRP38Q00723 242 aaPredicted RBP3.24□□□□□ -1.89
LCB5YLR260W YPL068CQ02749 293 aa3.24□□□□□ -1.89
LCB5YLR260W YML108WQ03759 105 aa3.24□□□□□ -1.89
LCB5YLR260W RVB1Q03940 463 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W SNT309Q06091 175 aaPredicted RBP3.24□□□□□ -1.89
LCB5YLR260W PST1Q12355 444 aa3.24□□□□□ -1.89
LCB5YLR260W NPC2Q12408 173 aa3.24□□□□□ -1.89
LCB5YLR260W ADE5,7P07244 802 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W CPA1P07258 411 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W MRP1P10662 321 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W DBF2P22204 572 aa3.24□□□□□ -1.89
LCB5YLR260W YCR006CP25350 157 aa3.24□□□□□ -1.89
LCB5YLR260W MXR2P25566 168 aa3.24□□□□□ -1.89
LCB5YLR260W URA10P30402 227 aa3.24□□□□□ -1.89
LCB5YLR260W NDC1P32500 655 aa3.24□□□□□ -1.89
LCB5YLR260W IES6P32617 166 aa3.24□□□□□ -1.89
LCB5YLR260W SSO1P32867 290 aa3.24□□□□□ -1.89
LCB5YLR260W THI80P35202 319 aa3.24□□□□□ -1.89
LCB5YLR260W VPS21P36017 210 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W SOL2P37262 315 aa3.24□□□□□ -1.89
LCB5YLR260W YER184CP39961 794 aa3.24□□□□□ -1.89
LCB5YLR260W YER079WP40052 210 aaKnown RBP3.24□□□□□ -1.89
LCB5YLR260W BAP3P41815 604 aa3.24□□□□□ -1.89
LCB5YLR260W YJR011CP47086 261 aaPredicted RBP3.24□□□□□ -1.89
LCB5YLR260W YJR149WP47177 404 aa3.24□□□□□ -1.89
LCB5YLR260W RCF2P53721 224 aa3.24□□□□□ -1.89
LCB5YLR260W ATG4P53867 494 aa3.24□□□□□ -1.89
LCB5YLR260W YNL092WP53934 400 aa3.24□□□□□ -1.89
LCB5YLR260W RSM23Q01163 450 aa3.24□□□□□ -1.89
LCB5YLR260W DYN3Q04949 312 aa3.24□□□□□ -1.89
LCB5YLR260W CSM4Q08955 156 aa3.24□□□□□ -1.89
LCB5YLR260W Q0010Q9ZZX9 128 aa3.24□□□□□ -1.89
LCB5YLR260W HEM15P16622 393 aa3.23□□□□□ -1.89
LCB5YLR260W MNS1P32906 549 aa3.23□□□□□ -1.89
LCB5YLR260W TOD6P34219 525 aa3.23□□□□□ -1.89
LCB5YLR260W CAF4P36130 643 aa3.23□□□□□ -1.89
LCB5YLR260W BNA4P38169 460 aa3.23□□□□□ -1.89
LCB5YLR260W VBA2P38358 474 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W VMA22P38784 181 aa3.23□□□□□ -1.89
LCB5YLR260W SRP14P38985 146 aa3.23□□□□□ -1.89
LCB5YLR260W VRG4P40107 337 aa3.23□□□□□ -1.89
LCB5YLR260W JLP2P40206 208 aa3.23□□□□□ -1.89
LCB5YLR260W SAS2P40963 338 aa3.23□□□□□ -1.89
LCB5YLR260W HOC1P47124 396 aa3.23□□□□□ -1.89
LCB5YLR260W SEH1P53011 349 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W DML1Q03652 475 aa3.23□□□□□ -1.89
LCB5YLR260W NUP53Q03790 475 aa3.23□□□□□ -1.89
LCB5YLR260W PLP1Q04004 230 aa3.23□□□□□ -1.89
LCB5YLR260W PEX10Q05568 337 aa3.23□□□□□ -1.89
LCB5YLR260W YPD1Q07688 167 aa3.23□□□□□ -1.89
LCB5YLR260W THP1Q08231 455 aa3.23□□□□□ -1.89
LCB5YLR260W YMR030W-AQ3E760 96 aa3.23□□□□□ -1.89
LCB5YLR260W GCN1P33892 2672 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W SEC14P24280 304 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W PTP1P25044 335 aa3.23□□□□□ -1.89
LCB5YLR260W POP5P28005 173 aa3.23□□□□□ -1.89
LCB5YLR260W VMA5P31412 392 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W CDC13P32797 924 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W LST4P34239 828 aa3.23□□□□□ -1.89
LCB5YLR260W FMP46P36141 133 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W YPT10P38146 199 aa3.23□□□□□ -1.89
LCB5YLR260W TCM62P38228 572 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W LYS1P38998 373 aaRIP-Chip data3.23□□□□□ -1.89 RIP-Chip
LCB5YLR260W YFR057WP43625 151 aa3.23□□□□□ -1.89
LCB5YLR260W AIM24P47127 394 aa3.23□□□□□ -1.89
LCB5YLR260W UBP8P50102 471 aa3.23□□□□□ -1.89
LCB5YLR260W NIF3P53081 288 aa3.23□□□□□ -1.89
LCB5YLR260W YGR042WP53227 271 aa3.23□□□□□ -1.89
LCB5YLR260W BUD32P53323 261 aa3.23□□□□□ -1.89
LCB5YLR260W YNL140CP53910 189 aa3.23□□□□□ -1.89
LCB5YLR260W VHS1Q03785 461 aa3.23□□□□□ -1.89
LCB5YLR260W NAT4Q04751 285 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms