RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	1.24	□□□□□ -2.21	not detected
SMC4	YLR086W	YHI9	P38765	294 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	BAT1	P38891	393 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	RCY1	P39531	840 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	YNL208W	P40159	199 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	BIO3	P50277	480 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	SWC4	P53201	476 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	KTR6	P54070	446 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	BOP2	Q06150	570 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	TRM10	Q12400	293 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	FMP16	Q12497	93 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	IZH4	Q99393	312 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	RIM15	P43565	1770 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	LDB16	P25587	256 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	PMT2	P31382	759 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	RME1	P32338	300 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	SKG6	P32900	734 aa	Predicted RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	MRPL27	P36526	146 aa	Predicted RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	SWD3	P38123	315 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	FET3	P38993	636 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	SHC1	P39000	512 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	YJR030C	P47101	745 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	IBA57	P47158	497 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	ADD37	Q03233	198 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	ABZ2	Q03266	374 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	FSH2	Q05015	223 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	CSM4	Q08955	156 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	RPS24A	P0CX31	135 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	RPS24B	P0CX32	135 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	URA10	P30402	227 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	MEI5	P32489	222 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	RPT5	P33297	434 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	MRX3	P38172	270 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	IML3	P38265	245 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	YHL044W	P38727	235 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	MIG3	P39943	394 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	NUP84	P52891	726 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	PNC1	P53184	216 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	YGR168C	P53293	376 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	RRN5	Q02983	363 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	KRE28	Q04431	385 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	OSM1	P21375	501 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	IMP3	P32899	183 aa	Predicted RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	KTI12	P34253	313 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	COS9	P36034	407 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	HMT1	P38074	348 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	TAE1	P38340	232 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	SEO1	P39709	593 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	PEX22	P39718	180 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	MRX5	P47007	382 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	KEL2	P50090	882 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	YPS5	P53057	165 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	YMR010W	Q03687	405 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	SNX41	Q04053	625 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	PAL1	Q05518	499 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	GAS2	Q06135	555 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	SME1	Q12330	94 aa	Predicted RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	RPS3	P05750	240 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	ACP1	P32463	125 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	MAK5	P38112	773 aa	Predicted RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	GPI18	P38211	433 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	OXA1	P39952	402 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	GDS1	P41913	522 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	YNL320W	P42840	284 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	HCH1	P53834	153 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	VHS1	Q03785	461 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	YLR177W	Q06251	628 aa		1.23	□□□□□ -2.21
SMC4	YLR086W	SAM4	Q08985	325 aa	Known RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	PRP46	Q12417	451 aa	Predicted RBP	1.23	□□□□□ -2.21
SMC4	YLR086W	RRT12	P25381	491 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	SUA5	P32579	426 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	YOX1	P34161	385 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	SCC4	P40090	624 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	SLM1	P40485	686 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	ACT1	P60010	375 aa	Known RBP	1.22	□□□□□ -2.21
SMC4	YLR086W	RMI1	Q02685	241 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	ATC1	Q04005	294 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	ARO80	Q04052	950 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	GMC1	Q04399	608 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	FOL3	Q12676	427 aa	Predicted RBP	1.22	□□□□□ -2.21
SMC4	YLR086W	FIG2	P25653	1609 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.22	□□□□□ -2.21	not detected
SMC4	YLR086W	MATALPHA2	P0CY08	210 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	HMLALPHA2	P0CY09	210 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	RPO26	P20435	155 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	DAL81	P21657	970 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	YKL063C	P35725	167 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	SOL2	P37262	315 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	GGC1	P38988	300 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	FRT2	P39734	528 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	FMC1	P40491	155 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	YFL064C	P43540	174 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	TPN1	P53099	579 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	TPC1	P53257	314 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	MED4	Q12343	284 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	COX4	P04037	155 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	NAM2	P11325	894 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	TFS1	P14306	219 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	GPI12	P23797	304 aa		1.22	□□□□□ -2.21
SMC4	YLR086W	CDC10	P25342	322 aa	Known RBP	1.22	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms