RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W TAF14P35189 244 aa3.8□□□□□ -1.8
SOF1YLL011W MCH2P36032 473 aa3.8□□□□□ -1.8
SOF1YLL011W ECM8P38246 354 aa3.8□□□□□ -1.8
SOF1YLL011W COX14P39103 70 aa3.8□□□□□ -1.8
SOF1YLL011W ASG7P46993 209 aa3.8□□□□□ -1.8
SOF1YLL011W NOP19P53317 196 aaPredicted RBP3.8□□□□□ -1.8
SOF1YLL011W RIM13Q03792 727 aa3.8□□□□□ -1.8
SOF1YLL011W YMR254CQ04838 102 aa3.8□□□□□ -1.8
SOF1YLL011W TAZ1Q06510 381 aa3.8□□□□□ -1.8
SOF1YLL011W NDE2Q07500 545 aa3.8□□□□□ -1.8
SOF1YLL011W CSM4Q08955 156 aa3.8□□□□□ -1.8
SOF1YLL011W GRE1Q08969 168 aa3.8□□□□□ -1.8
SOF1YLL011W RRP42Q12277 265 aaPredicted RBP3.8□□□□□ -1.8
SOF1YLL011W PCL9Q12477 304 aa3.8□□□□□ -1.8
SOF1YLL011W VPS13Q07878 3144 aa3.8□□□□□ -1.8
SOF1YLL011W YDR157WA0A023PZE8 133 aa3.79□□□□□ -1.8
SOF1YLL011W ERD1P16151 362 aa3.79□□□□□ -1.8
SOF1YLL011W RPL16AP26784 199 aaKnown RBP3.79□□□□□ -1.8
SOF1YLL011W IDH1P28834 360 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SOF1YLL011W ATP7P30902 174 aa3.79□□□□□ -1.8
SOF1YLL011W RAD5P32849 1169 aaPredicted RBP3.79□□□□□ -1.8
SOF1YLL011W SPT4P32914 102 aaPredicted RBP3.79□□□□□ -1.8
SOF1YLL011W YBR241CP38142 488 aa3.79□□□□□ -1.8
SOF1YLL011W AVT5P38176 459 aa3.79□□□□□ -1.8
SOF1YLL011W BMT2P38278 337 aa3.79□□□□□ -1.8
SOF1YLL011W EGD2P38879 174 aaKnown RBP3.79□□□□□ -1.8
SOF1YLL011W COX15P40086 486 aa3.79□□□□□ -1.8
SOF1YLL011W LCB3P47013 409 aa3.79□□□□□ -1.8
SOF1YLL011W YJR012CP47087 207 aa3.79□□□□□ -1.8
SOF1YLL011W UBC13P52490 153 aa3.79□□□□□ -1.8
SOF1YLL011W GOR1P53839 350 aa3.79□□□□□ -1.8
SOF1YLL011W YNL040WP53960 456 aaPredicted RBP3.79□□□□□ -1.8
SOF1YLL011W DIA1P54005 336 aa3.79□□□□□ -1.8
SOF1YLL011W RPL15BP54780 204 aaPredicted RBP3.79□□□□□ -1.8
SOF1YLL011W YMR027WQ04371 470 aa3.79□□□□□ -1.8
SOF1YLL011W SFH1Q06168 426 aa3.79□□□□□ -1.8
SOF1YLL011W YPR064WQ12492 139 aa3.79□□□□□ -1.8
SOF1YLL011W RPP0P05317 312 aaKnown RBP3.79□□□□□ -1.8
SOF1YLL011W YER190C-BP0CX94 160 aa3.79□□□□□ -1.8
SOF1YLL011W YEL077W-AP0CX95 160 aa3.79□□□□□ -1.8
SOF1YLL011W YGR296C-BP0CX96 160 aa3.79□□□□□ -1.8
SOF1YLL011W YPL283W-BP0CX97 160 aa3.79□□□□□ -1.8
SOF1YLL011W YPR204C-AP0CX98 160 aa3.79□□□□□ -1.8
SOF1YLL011W NDC1P32500 655 aa3.79□□□□□ -1.8
SOF1YLL011W SPO23P33757 523 aa3.79□□□□□ -1.8
SOF1YLL011W YKL187CP34231 750 aa3.79□□□□□ -1.8
SOF1YLL011W SDS24P38314 527 aa3.79□□□□□ -1.8
SOF1YLL011W SMB1P40018 196 aaKnown RBP3.79□□□□□ -1.8
SOF1YLL011W UTP18P40362 594 aaPredicted RBP3.79□□□□□ -1.8
SOF1YLL011W YIL001WP40560 513 aa3.79□□□□□ -1.8
SOF1YLL011W PEX31P53203 462 aa3.79□□□□□ -1.8
SOF1YLL011W VHT1P53241 593 aa3.79□□□□□ -1.8
SOF1YLL011W YNL095CP53932 642 aa3.79□□□□□ -1.8
SOF1YLL011W EBS1Q03466 884 aaKnown RBP3.79□□□□□ -1.8
SOF1YLL011W TRM82Q03774 444 aa3.79□□□□□ -1.8
SOF1YLL011W PLB3Q08108 686 aa3.79□□□□□ -1.8
SOF1YLL011W ABP140Q08641 628 aaKnown RBP3.79□□□□□ -1.8
SOF1YLL011W EAF3Q12432 401 aa3.79□□□□□ -1.8
SOF1YLL011W YCL012CQ8J0M4 134 aa3.79□□□□□ -1.8
SOF1YLL011W PIS1P06197 220 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W RPS14AP06367 137 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W NAM2P11325 894 aa3.78□□□□□ -1.8
SOF1YLL011W MDM10P18409 493 aa3.78□□□□□ -1.8
SOF1YLL011W QRI5P32344 111 aa3.78□□□□□ -1.8
SOF1YLL011W GDH2P33327 1092 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W MIX23P38162 196 aa3.78□□□□□ -1.8
SOF1YLL011W ATG12P38316 186 aa3.78□□□□□ -1.8
SOF1YLL011W MTC4P38335 694 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W RPS14BP39516 138 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W SOP4P39543 234 aaPredicted RBP3.78□□□□□ -1.8
SOF1YLL011W SEC72P39742 193 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W YIL029CP40538 142 aa3.78□□□□□ -1.8
SOF1YLL011W CIN2P46670 268 aa3.78□□□□□ -1.8
SOF1YLL011W YJR079WP47126 109 aa3.78□□□□□ -1.8
SOF1YLL011W YPT32P51996 222 aaKnown RBP3.78□□□□□ -1.8
SOF1YLL011W GET1P53192 235 aa3.78□□□□□ -1.8
SOF1YLL011W MAL13P53338 473 aa3.78□□□□□ -1.8
SOF1YLL011W YDL109CQ12103 647 aa3.78□□□□□ -1.8
SOF1YLL011W PER33Q12144 273 aa3.78□□□□□ -1.8
SOF1YLL011W FRE8Q12209 686 aa3.78□□□□□ -1.8
SOF1YLL011W RPL23AP0CX41 137 aaKnown RBP3.77□□□□□ -1.81
SOF1YLL011W RPL23BP0CX42 137 aaKnown RBP3.77□□□□□ -1.81
SOF1YLL011W CTA1P15202 515 aa3.77□□□□□ -1.81
SOF1YLL011W AIM17P23180 465 aaKnown RBP3.77□□□□□ -1.81
SOF1YLL011W CHA1P25379 360 aaKnown RBP3.77□□□□□ -1.81
SOF1YLL011W YCR102CP25608 368 aa3.77□□□□□ -1.81
SOF1YLL011W INO2P26798 304 aa3.77□□□□□ -1.81
SOF1YLL011W NAM9P27929 486 aa3.77□□□□□ -1.81
SOF1YLL011W TRS65P32893 560 aa3.77□□□□□ -1.81
SOF1YLL011W PDC2P32896 925 aa3.77□□□□□ -1.81
SOF1YLL011W PMU1P36069 295 aa3.77□□□□□ -1.81
SOF1YLL011W NAT2P37293 288 aa3.77□□□□□ -1.81
SOF1YLL011W ERG10P41338 398 aaKnown RBP3.77□□□□□ -1.81
SOF1YLL011W USE1P53146 245 aa3.77□□□□□ -1.81
SOF1YLL011W TDA1Q03533 586 aa3.77□□□□□ -1.81
SOF1YLL011W PRM6Q04705 352 aa3.77□□□□□ -1.81
SOF1YLL011W FAR8Q05040 523 aa3.77□□□□□ -1.81
SOF1YLL011W LOT6Q07923 191 aa3.77□□□□□ -1.81
SOF1YLL011W GPM2Q12008 311 aa3.77□□□□□ -1.81
SOF1YLL011W FIG2P25653 1609 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 76.6 ms