RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W TY2B-BQ12491 1770 aa1.72□□□□□ -2.13
SPE1YKL184W TY1B-DR3Q99231 1755 aa1.72□□□□□ -2.13
SPE1YKL184W STU1P38198 1513 aa1.71□□□□□ -2.14
SPE1YKL184W DNF1P32660 1571 aa1.71□□□□□ -2.14
SPE1YKL184W RPO31P04051 1460 aa1.71□□□□□ -2.14
SPE1YKL184W VPS1P21576 704 aaKnown RBP1.71□□□□□ -2.14
SPE1YKL184W COX10P21592 462 aa1.71□□□□□ -2.14
SPE1YKL184W YKL187CP34231 750 aa1.71□□□□□ -2.14
SPE1YKL184W YBR062CP38239 180 aa1.71□□□□□ -2.14
SPE1YKL184W LOC1P43586 204 aaPredicted RBP1.71□□□□□ -2.14
SPE1YKL184W CSI1Q04368 295 aa1.71□□□□□ -2.14
SPE1YKL184W TAZ1Q06510 381 aa1.71□□□□□ -2.14
SPE1YKL184W HRT1Q08273 121 aa1.71□□□□□ -2.14
SPE1YKL184W YOR292CQ08743 309 aa1.71□□□□□ -2.14
SPE1YKL184W YDR018CQ12185 396 aa1.71□□□□□ -2.14
SPE1YKL184W YCF1P39109 1515 aaKnown RBP1.71□□□□□ -2.14
SPE1YKL184W TY1B-HO13535 1793 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-DR5P0C2I2 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-DR6P0C2I3 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-LR2P0C2I5 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-LR3P0C2I6 1755 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W TY1B-PR1P0C2I9 1755 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W TY1B-PR2P0C2J0 1756 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-PR3P0C2J1 1755 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W TY1B-JR1P47098 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-ML2Q03434 1755 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W TY1B-ER1Q03612 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-ML1Q04711 1755 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W TY1B-GR2Q12269 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-OLQ12273 1755 aa1.7□□□□□ -2.14
SPE1YKL184W TY1B-PLQ12414 1755 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W ESC1Q03661 1658 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W IMP1P28627 190 aa1.7□□□□□ -2.14
SPE1YKL184W MRPL6P32904 214 aa1.7□□□□□ -2.14
SPE1YKL184W TPO5P36029 618 aa1.7□□□□□ -2.14
SPE1YKL184W RPC37P36121 282 aa1.7□□□□□ -2.14
SPE1YKL184W GDS1P41913 522 aa1.7□□□□□ -2.14
SPE1YKL184W MRX5P47007 382 aa1.7□□□□□ -2.14
SPE1YKL184W UBC13P52490 153 aa1.7□□□□□ -2.14
SPE1YKL184W CAX4P53223 239 aa1.7□□□□□ -2.14
SPE1YKL184W CPD1P53314 239 aa1.7□□□□□ -2.14
SPE1YKL184W MPP6P53725 186 aaPredicted RBP1.7□□□□□ -2.14
SPE1YKL184W SMD1Q02260 146 aaPredicted RBP1.7□□□□□ -2.14
SPE1YKL184W SPP2Q02521 185 aa1.7□□□□□ -2.14
SPE1YKL184W YPL077CQ02831 240 aa1.7□□□□□ -2.14
SPE1YKL184W YMR209CQ03648 457 aa1.7□□□□□ -2.14
SPE1YKL184W SEC13Q04491 297 aaKnown RBP1.7□□□□□ -2.14
SPE1YKL184W PEX30Q06169 523 aa1.7□□□□□ -2.14
SPE1YKL184W YLR446WQ06204 433 aa1.7□□□□□ -2.14
SPE1YKL184W BCP1Q06338 283 aa1.7□□□□□ -2.14
SPE1YKL184W GPN3Q06543 272 aa1.7□□□□□ -2.14
SPE1YKL184W SSK22P25390 1331 aaPredicted RBP1.7□□□□□ -2.14
SPE1YKL184W MYO2P19524 1574 aaKnown RBP1.69□□□□□ -2.14
SPE1YKL184W YOR1P53049 1477 aa1.69□□□□□ -2.14
SPE1YKL184W MMS22Q06164 1454 aa1.69□□□□□ -2.14
SPE1YKL184W BNI1P41832 1953 aa1.69□□□□□ -2.14
SPE1YKL184W SSA3P09435 649 aaKnown RBP1.69□□□□□ -2.14
SPE1YKL184W TFS1P14306 219 aa1.69□□□□□ -2.14
SPE1YKL184W DAL5P15365 543 aa1.69□□□□□ -2.14
SPE1YKL184W HPR1P17629 752 aaKnown RBP1.69□□□□□ -2.14
SPE1YKL184W SPT4P32914 102 aaPredicted RBP1.69□□□□□ -2.14
SPE1YKL184W GPX1P36014 167 aa1.69□□□□□ -2.14
SPE1YKL184W VPS45P38932 577 aa1.69□□□□□ -2.14
SPE1YKL184W MIC19P43594 170 aa1.69□□□□□ -2.14
SPE1YKL184W DPP1Q05521 289 aa1.69□□□□□ -2.14
SPE1YKL184W ARC18Q05933 178 aaKnown RBP1.69□□□□□ -2.14
SPE1YKL184W TOP2P06786 1428 aaKnown RBP1.69□□□□□ -2.14
SPE1YKL184W RPA190P10964 1664 aaKnown RBP1.69□□□□□ -2.14
SPE1YKL184W CHD1P32657 1468 aa1.69□□□□□ -2.14
SPE1YKL184W YRF1-1P0CX20 1796 aa1.68□□□□□ -2.14
SPE1YKL184W YRF1-5P0CX21 1796 aa1.68□□□□□ -2.14
SPE1YKL184W YRF1-8P0CX22 1796 aa1.68□□□□□ -2.14
SPE1YKL184W TDH1P00360 332 aaKnown RBP1.68□□□□□ -2.14
SPE1YKL184W ATP6P00854 259 aa1.68□□□□□ -2.14
SPE1YKL184W IFM1P25038 676 aa1.68□□□□□ -2.14
SPE1YKL184W YCR025CP25352 136 aa1.68□□□□□ -2.14
SPE1YKL184W UTR5P32630 166 aa1.68□□□□□ -2.14
SPE1YKL184W IMP3P32899 183 aaPredicted RBP1.68□□□□□ -2.14
SPE1YKL184W EBP2P36049 427 aaKnown RBP1.68□□□□□ -2.14
SPE1YKL184W KRE29P40026 464 aa1.68□□□□□ -2.14
SPE1YKL184W SHQ1P40486 507 aaPredicted RBP1.68□□□□□ -2.14
SPE1YKL184W ECM19Q06011 112 aa1.68□□□□□ -2.14
SPE1YKL184W DFM1Q12743 341 aaKnown RBP1.68□□□□□ -2.14
SPE1YKL184W SMC4Q12267 1418 aa1.68□□□□□ -2.14
SPE1YKL184W CDC25P04821 1589 aa1.68□□□□□ -2.14
SPE1YKL184W RKR1Q04781 1562 aa1.68□□□□□ -2.14
SPE1YKL184W FRS2P15625 503 aaKnown RBP1.67□□□□□ -2.14
SPE1YKL184W AIM29P36154 155 aa1.67□□□□□ -2.14
SPE1YKL184W EDC2P40023 145 aaPredicted RBP1.67□□□□□ -2.14
SPE1YKL184W RRG9P40156 214 aa1.67□□□□□ -2.14
SPE1YKL184W BUD13P46947 266 aaPredicted RBP1.67□□□□□ -2.14
SPE1YKL184W FMP33P46998 180 aa1.67□□□□□ -2.14
SPE1YKL184W YJL118WP47022 219 aa1.67□□□□□ -2.14
SPE1YKL184W MPP10P47083 593 aaKnown RBP1.67□□□□□ -2.14
SPE1YKL184W PRP24P49960 444 aaKnown RBP1.67□□□□□ -2.14
SPE1YKL184W PEX31P53203 462 aa1.67□□□□□ -2.14
SPE1YKL184W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SPE1YKL184W YLL007CQ07799 665 aa1.67□□□□□ -2.14
SPE1YKL184W RRP36Q12481 300 aaPredicted RBP1.67□□□□□ -2.14
SPE1YKL184W TY1B-JR2P47100 1755 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms