RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W VMA2P16140 517 aaKnown RBP1.24□□□□□ -2.21
HIT1YJR055W DCC1P25559 380 aa1.24□□□□□ -2.21
HIT1YJR055W SMF2P38778 549 aa1.24□□□□□ -2.21
HIT1YJR055W CTM1P38818 585 aa1.24□□□□□ -2.21
HIT1YJR055W TDA11P38854 504 aa1.24□□□□□ -2.21
HIT1YJR055W CAX4P53223 239 aa1.24□□□□□ -2.21
HIT1YJR055W PDR16P53860 351 aaKnown RBP1.24□□□□□ -2.21
HIT1YJR055W SUR7P54003 302 aa1.24□□□□□ -2.21
HIT1YJR055W YMR244WQ04018 355 aa1.24□□□□□ -2.21
HIT1YJR055W APC4Q04601 652 aa1.24□□□□□ -2.21
HIT1YJR055W PGC1Q08959 321 aa1.24□□□□□ -2.21
HIT1YJR055W TAF10Q12030 206 aa1.24□□□□□ -2.21
HIT1YJR055W YDR262WQ12331 272 aa1.24□□□□□ -2.21
HIT1YJR055W SFG1Q12507 346 aa1.24□□□□□ -2.21
HIT1YJR055W UBR2Q07963 1872 aa1.24□□□□□ -2.21
HIT1YJR055W RAD7P06779 565 aa1.23□□□□□ -2.21
HIT1YJR055W CPT1P17898 393 aa1.23□□□□□ -2.21
HIT1YJR055W MRPL20P22354 195 aaPredicted RBP1.23□□□□□ -2.21
HIT1YJR055W MIG1P27705 504 aa1.23□□□□□ -2.21
HIT1YJR055W ZRT3P34240 503 aa1.23□□□□□ -2.21
HIT1YJR055W UIP5P36137 443 aa1.23□□□□□ -2.21
HIT1YJR055W RFT1P38206 574 aaPredicted RBP1.23□□□□□ -2.21
HIT1YJR055W YMR262WP38430 313 aa1.23□□□□□ -2.21
HIT1YJR055W YHR122WP38829 231 aa1.23□□□□□ -2.21
HIT1YJR055W ECM14P38836 430 aa1.23□□□□□ -2.21
HIT1YJR055W PES4P39684 611 aa1.23□□□□□ -2.21
HIT1YJR055W UTP25P40498 721 aaKnown RBP1.23□□□□□ -2.21
HIT1YJR055W YGL088WP53151 121 aa1.23□□□□□ -2.21
HIT1YJR055W YGR266WP53326 701 aa1.23□□□□□ -2.21
HIT1YJR055W SMD1Q02260 146 aaPredicted RBP1.23□□□□□ -2.21
HIT1YJR055W ARC18Q05933 178 aaKnown RBP1.23□□□□□ -2.21
HIT1YJR055W MRX9Q07349 420 aaKnown RBP1.23□□□□□ -2.21
HIT1YJR055W PBP4Q07362 185 aaKnown RBP1.23□□□□□ -2.21
HIT1YJR055W RRP42Q12277 265 aaPredicted RBP1.23□□□□□ -2.21
HIT1YJR055W UTP23Q12339 254 aaKnown RBP1.23□□□□□ -2.21
HIT1YJR055W RPN6Q12377 434 aa1.23□□□□□ -2.21
HIT1YJR055W ERP3Q12403 225 aa1.23□□□□□ -2.21
HIT1YJR055W LYS2P07702 1392 aa1.22□□□□□ -2.21
HIT1YJR055W RPO41P13433 1351 aaKnown RBP1.22□□□□□ -2.21
HIT1YJR055W CDC37P06101 506 aaKnown RBP1.22□□□□□ -2.21
HIT1YJR055W SNF6P18888 332 aa1.22□□□□□ -2.21
HIT1YJR055W VPS1P21576 704 aaKnown RBP1.22□□□□□ -2.21
HIT1YJR055W MRPL6P32904 214 aa1.22□□□□□ -2.21
HIT1YJR055W TIP20P33891 701 aa1.22□□□□□ -2.21
HIT1YJR055W PEX32P38292 413 aa1.22□□□□□ -2.21
HIT1YJR055W YCH1P42937 148 aa1.22□□□□□ -2.21
HIT1YJR055W YFL040WP43562 540 aa1.22□□□□□ -2.21
HIT1YJR055W MIC19P43594 170 aa1.22□□□□□ -2.21
HIT1YJR055W SHE4P51534 789 aa1.22□□□□□ -2.21
HIT1YJR055W YPL080CQ02826 108 aa1.22□□□□□ -2.21
HIT1YJR055W CAB5Q03941 241 aa1.22□□□□□ -2.21
HIT1YJR055W RPN8Q08723 338 aaKnown RBP1.22□□□□□ -2.21
HIT1YJR055W VIK1Q12045 647 aa1.22□□□□□ -2.21
HIT1YJR055W YPL245WQ12179 454 aaKnown RBP1.22□□□□□ -2.21
HIT1YJR055W IZH4Q99393 312 aa1.22□□□□□ -2.21
HIT1YJR055W SIR4P11978 1358 aa1.21□□□□□ -2.21
HIT1YJR055W REP1P03871 373 aa1.21□□□□□ -2.22
HIT1YJR055W CBP2P03874 630 aaPredicted RBP1.21□□□□□ -2.22
HIT1YJR055W HPR1P17629 752 aaKnown RBP1.21□□□□□ -2.22
HIT1YJR055W SAR1P20606 190 aaKnown RBP1.21□□□□□ -2.22
HIT1YJR055W RPL16BP26785 198 aaKnown RBP1.21□□□□□ -2.22
HIT1YJR055W SWC5P38326 303 aa1.21□□□□□ -2.22
HIT1YJR055W YHR035WP38769 630 aa1.21□□□□□ -2.22
HIT1YJR055W SSO2P39926 295 aa1.21□□□□□ -2.22
HIT1YJR055W DSE1P40077 573 aa1.21□□□□□ -2.22
HIT1YJR055W AIM20P40451 204 aa1.21□□□□□ -2.22
HIT1YJR055W PMT4P46971 762 aa1.21□□□□□ -2.22
HIT1YJR055W VOA1P53262 265 aa1.21□□□□□ -2.22
HIT1YJR055W TRM44Q02648 567 aaKnown RBP1.21□□□□□ -2.22
HIT1YJR055W GMC1Q04399 608 aa1.21□□□□□ -2.22
HIT1YJR055W YPL278CQ08990 100 aa1.21□□□□□ -2.22
HIT1YJR055W RTC5Q12108 567 aaKnown RBP1.21□□□□□ -2.22
HIT1YJR055W PRM4Q12498 284 aa1.21□□□□□ -2.22
HIT1YJR055W ACC1Q00955 2233 aaKnown RBP1.2□□□□□ -2.22
HIT1YJR055W CAR2P07991 424 aaKnown RBP1.2□□□□□ -2.22
HIT1YJR055W IMP1P28627 190 aa1.2□□□□□ -2.22
HIT1YJR055W SUR1P33300 382 aa1.2□□□□□ -2.22
HIT1YJR055W SWD2P36104 329 aaPredicted RBP1.2□□□□□ -2.22
HIT1YJR055W LIN1P38852 340 aaPredicted RBP1.2□□□□□ -2.22
HIT1YJR055W OSW5P40219 148 aa1.2□□□□□ -2.22
HIT1YJR055W SLM1P40485 686 aa1.2□□□□□ -2.22
HIT1YJR055W KEL2P50090 882 aa1.2□□□□□ -2.22
HIT1YJR055W NBP1P52919 319 aaPredicted RBP1.2□□□□□ -2.22
HIT1YJR055W SDS23P53172 527 aa1.2□□□□□ -2.22
HIT1YJR055W YPL113CQ02961 396 aa1.2□□□□□ -2.22
HIT1YJR055W SNX41Q04053 625 aa1.2□□□□□ -2.22
HIT1YJR055W RDL2Q08742 149 aaKnown RBP1.2□□□□□ -2.22
HIT1YJR055W YPL150WQ12152 901 aa1.2□□□□□ -2.22
HIT1YJR055W MDY2Q12285 212 aa1.2□□□□□ -2.22
HIT1YJR055W IES3Q12345 250 aa1.2□□□□□ -2.22
HIT1YJR055W PFK27Q12471 397 aaPredicted RBP1.2□□□□□ -2.22
HIT1YJR055W GCD2P12754 651 aaPredicted RBP1.19□□□□□ -2.22
HIT1YJR055W PET18P25362 215 aa1.19□□□□□ -2.22
HIT1YJR055W CSM1P25651 190 aa1.19□□□□□ -2.22
HIT1YJR055W CDC13P32797 924 aaKnown RBP1.19□□□□□ -2.22
HIT1YJR055W CSE1P33307 960 aa1.19□□□□□ -2.22
HIT1YJR055W BUD2P33314 1104 aa1.19□□□□□ -2.22
HIT1YJR055W YKL187CP34231 750 aa1.19□□□□□ -2.22
HIT1YJR055W YBL081WP38180 368 aaKnown RBP1.19□□□□□ -2.22
HIT1YJR055W RCK1P38622 512 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms