RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W CTF19Q02732 369 aa3.27□□□□□ -1.89
UBP12YJL197W RPN8Q08723 338 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W TMS1Q12116 473 aa3.27□□□□□ -1.89
UBP12YJL197W SPA2P23201 1466 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W RPS3P05750 240 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W RPL42AP0CX27 106 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W RPL42BP0CX28 106 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W CHA1P25379 360 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W LSM12P38828 187 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W NIF3P53081 288 aa3.27□□□□□ -1.89
UBP12YJL197W TPN1P53099 579 aa3.27□□□□□ -1.89
UBP12YJL197W YGL159WP53110 370 aa3.27□□□□□ -1.89
UBP12YJL197W SUR7P54003 302 aa3.27□□□□□ -1.89
UBP12YJL197W MRS2Q01926 470 aa3.27□□□□□ -1.89
UBP12YJL197W PRM15Q03262 622 aa3.27□□□□□ -1.89
UBP12YJL197W CDD1Q06549 142 aa3.27□□□□□ -1.89
UBP12YJL197W TFC7Q12415 435 aa3.27□□□□□ -1.89
UBP12YJL197W FOL3Q12676 427 aaPredicted RBP3.27□□□□□ -1.89
UBP12YJL197W BCY1P07278 416 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W RPS18AP0CX55 146 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W RPS18BP0CX56 146 aaPredicted RBP3.27□□□□□ -1.89
UBP12YJL197W AGA1P32323 725 aa3.27□□□□□ -1.89
UBP12YJL197W PRP24P49960 444 aaKnown RBP3.27□□□□□ -1.89
UBP12YJL197W PEX31P53203 462 aa3.27□□□□□ -1.89
UBP12YJL197W FAR10Q06001 478 aa3.27□□□□□ -1.89
UBP12YJL197W TAZ1Q06510 381 aa3.27□□□□□ -1.89
UBP12YJL197W YPR091CQ06833 770 aa3.27□□□□□ -1.89
UBP12YJL197W YGK3Q12222 375 aaPredicted RBP3.27□□□□□ -1.89
UBP12YJL197W YAL064W-BO13512 126 aa3.26□□□□□ -1.89
UBP12YJL197W DPB2P24482 689 aaPredicted RBP3.26□□□□□ -1.89
UBP12YJL197W AEP1P32493 518 aa3.26□□□□□ -1.89
UBP12YJL197W ANR2P36090 516 aaPredicted RBP3.26□□□□□ -1.89
UBP12YJL197W NAT2P37293 288 aa3.26□□□□□ -1.89
UBP12YJL197W YBR241CP38142 488 aa3.26□□□□□ -1.89
UBP12YJL197W LCB3P47013 409 aa3.26□□□□□ -1.89
UBP12YJL197W ADO1P47143 340 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W YMR166CQ03829 368 aa3.26□□□□□ -1.89
UBP12YJL197W DPP1Q05521 289 aa3.26□□□□□ -1.89
UBP12YJL197W FCY22Q12119 530 aa3.26□□□□□ -1.89
UBP12YJL197W RPL20AP0CX23 172 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W RPL20BP0CX24 172 aaPredicted RBP3.26□□□□□ -1.89
UBP12YJL197W CDC10P25342 322 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W JEN1P36035 616 aa3.26□□□□□ -1.89
UBP12YJL197W FLO5P38894 1075 aa3.26□□□□□ -1.89
UBP12YJL197W MOB2P43563 287 aa3.26□□□□□ -1.89
UBP12YJL197W IRC18P47056 224 aa3.26□□□□□ -1.89
UBP12YJL197W ARC18Q05933 178 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W PEX30Q06169 523 aa3.26□□□□□ -1.89
UBP12YJL197W HMS1Q12398 434 aa3.26□□□□□ -1.89
UBP12YJL197W YDL199CQ12407 687 aa3.26□□□□□ -1.89
UBP12YJL197W TUB1P09733 447 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W MIR1P23641 311 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W CDC13P32797 924 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W NTF2P33331 125 aaKnown RBP3.26□□□□□ -1.89
UBP12YJL197W YFR057WP43625 151 aa3.26□□□□□ -1.89
UBP12YJL197W TDA1Q03533 586 aa3.26□□□□□ -1.89
UBP12YJL197W YML018CQ03730 393 aa3.26□□□□□ -1.89
UBP12YJL197W YOR114WQ12219 294 aa3.26□□□□□ -1.89
UBP12YJL197W RPL28P02406 149 aaKnown RBP3.25□□□□□ -1.89
UBP12YJL197W CKA2P19454 339 aa3.25□□□□□ -1.89
UBP12YJL197W KDX1P36005 433 aa3.25□□□□□ -1.89
UBP12YJL197W SNZ3P43545 298 aa3.25□□□□□ -1.89
UBP12YJL197W NUP57P48837 541 aa3.25□□□□□ -1.89
UBP12YJL197W SNZ2P53824 298 aa3.25□□□□□ -1.89
UBP12YJL197W RTC4P53850 401 aa3.25□□□□□ -1.89
UBP12YJL197W GMC1Q04399 608 aa3.25□□□□□ -1.89
UBP12YJL197W YPR098CQ06089 161 aa3.25□□□□□ -1.89
UBP12YJL197W TLG2Q08144 397 aa3.25□□□□□ -1.89
UBP12YJL197W PET494P07390 489 aaPredicted RBP3.25□□□□□ -1.89
UBP12YJL197W YFL068WP0CX99 160 aa3.25□□□□□ -1.89
UBP12YJL197W YLL066W-AP0CY00 160 aa3.25□□□□□ -1.89
UBP12YJL197W YLL067W-AP0CY01 160 aa3.25□□□□□ -1.89
UBP12YJL197W SHG1P38337 142 aa3.25□□□□□ -1.89
UBP12YJL197W BMT5P40493 336 aa3.25□□□□□ -1.89
UBP12YJL197W MDV1P47025 714 aa3.25□□□□□ -1.89
UBP12YJL197W MAK5P38112 773 aaPredicted RBP3.25□□□□□ -1.89
UBP12YJL197W RCK1P38622 512 aa3.25□□□□□ -1.89
UBP12YJL197W NBP35P52920 328 aa3.25□□□□□ -1.89
UBP12YJL197W SCS3P53012 380 aa3.25□□□□□ -1.89
UBP12YJL197W YPS5P53057 165 aa3.25□□□□□ -1.89
UBP12YJL197W CLD1P53264 445 aa3.25□□□□□ -1.89
UBP12YJL197W SWS2P53937 143 aa3.25□□□□□ -1.89
UBP12YJL197W YPL245WQ12179 454 aaKnown RBP3.25□□□□□ -1.89
UBP12YJL197W TRS65P32893 560 aa3.24□□□□□ -1.89
UBP12YJL197W MTC4P38335 694 aaKnown RBP3.24□□□□□ -1.89
UBP12YJL197W CHL4P38907 458 aa3.24□□□□□ -1.89
UBP12YJL197W SLX9P53251 210 aaPredicted RBP3.24□□□□□ -1.89
UBP12YJL197W YET2Q04210 160 aa3.24□□□□□ -1.89
UBP12YJL197W RRS1Q08746 203 aaKnown RBP3.24□□□□□ -1.89
UBP12YJL197W THP3Q12049 470 aaKnown RBP3.24□□□□□ -1.89
UBP12YJL197W RPH1P39956 796 aa3.24□□□□□ -1.89
UBP12YJL197W VAB2P40003 282 aa3.24□□□□□ -1.89
UBP12YJL197W BRR6P53062 197 aa3.24□□□□□ -1.89
UBP12YJL197W RFM1Q12192 310 aa3.24□□□□□ -1.89
UBP12YJL197W MRS3P10566 314 aa3.24□□□□□ -1.89
UBP12YJL197W SPS100P13130 326 aa3.24□□□□□ -1.89
UBP12YJL197W URA6P15700 204 aa3.24□□□□□ -1.89
UBP12YJL197W RPB5P20434 215 aa3.24□□□□□ -1.89
UBP12YJL197W LDS1P31379 325 aa3.24□□□□□ -1.89
UBP12YJL197W YBR096WP38256 230 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms