RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	NAM2	P11325	894 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	YOX1	P34161	385 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	YFL054C	P43549	646 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	SSY5	P47002	699 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	XPT1	P47165	209 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	LAS17	Q12446	633 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	YOL162W	P0CF19	215 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	MIG1	P27705	504 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	AGE2	P40529	298 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	CIN2	P46670	268 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	LOH1	P47055	219 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	BRR6	P53062	197 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	SLD3	P53135	668 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	YGR168C	P53293	376 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	YPT6	Q99260	215 aa		4.65	□□□□□ -1.66
RSC30	YHR056C	RPL39	P04650	51 aa		4.65	□□□□□ -1.67
RSC30	YHR056C	MTC7	P32633	139 aa		4.65	□□□□□ -1.67
RSC30	YHR056C	MTW1	P39731	289 aa		4.65	□□□□□ -1.67
RSC30	YHR056C	UGO1	Q03327	502 aa		4.65	□□□□□ -1.67
RSC30	YHR056C	CUE2	P36075	443 aa	Known RBP	4.64	□□□□□ -1.67
RSC30	YHR056C	RIB1	P38066	345 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	EDS1	P38073	919 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	ECM31	P38122	312 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	AGE1	Q04412	482 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	PPA2	P28239	310 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	VPH2	P32341	215 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	GSH1	P32477	678 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	CTR2	P38865	189 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	PHO90	P39535	881 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	TYW3	P53177	273 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	HHT1	P61830	136 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	ECM18	Q04623	453 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	DBP9	Q06218	594 aa	Known RBP	4.64	□□□□□ -1.67
RSC30	YHR056C	HRT1	Q08273	121 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	YDL009C	Q12210	107 aa		4.64	□□□□□ -1.67
RSC30	YHR056C	SPS4	P09937	338 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	RHB1	P25378	209 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	DEG1	P31115	442 aa	Known RBP	4.63	□□□□□ -1.67
RSC30	YHR056C	PRP19	P32523	503 aa	Known RBP	4.63	□□□□□ -1.67
RSC30	YHR056C	SIP2	P34164	415 aa	Known RBP	4.63	□□□□□ -1.67
RSC30	YHR056C	FLX1	P40464	311 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	NSA1	P53136	463 aa	Predicted RBP	4.63	□□□□□ -1.67
RSC30	YHR056C	MTL1	P53214	551 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	MEP3	P53390	489 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	TPS1	Q00764	495 aa	Known RBP	4.63	□□□□□ -1.67
RSC30	YHR056C	NNT1	Q05874	261 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	YDL114W	Q07530	308 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	RFU1	Q08003	200 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	GSH2	Q08220	491 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	YPL067C	Q02754	198 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	RRN5	Q02983	363 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	GPI17	Q04080	534 aa		4.63	□□□□□ -1.67
RSC30	YHR056C	REC114	P32841	428 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	AIM46	P38885	310 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	OST1	P41543	476 aa	Known RBP	4.62	□□□□□ -1.67
RSC30	YHR056C	SCW11	P53189	542 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	AIM36	Q03798	255 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	MLC2	Q06580	163 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	SSK1	Q07084	712 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	TOM40	P23644	387 aa	Known RBP	4.62	□□□□□ -1.67
RSC30	YHR056C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
RSC30	YHR056C	SRP102	P36057	244 aa	Predicted RBP	4.62	□□□□□ -1.67
RSC30	YHR056C	SRO77	P38163	1010 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	TIF11	P38912	153 aa	Known RBP	4.62	□□□□□ -1.67
RSC30	YHR056C	TDA10	P42938	290 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	CHA4	P43634	648 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	DYN3	Q04949	312 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	GEP3	Q08622	556 aa		4.62	□□□□□ -1.67
RSC30	YHR056C	MRT4	P33201	236 aa	Known RBP	4.61	□□□□□ -1.67
RSC30	YHR056C	MKS1	P34072	584 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	LTV1	P34078	463 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	TAT1	P38085	619 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	YGL114W	P53134	725 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	SKI7	Q08491	747 aa	Predicted RBP	4.61	□□□□□ -1.67
RSC30	YHR056C	WTM1	Q12363	437 aa	Known RBP	4.61	□□□□□ -1.67
RSC30	YHR056C	YCR100C	P25606	316 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	PUG1	P40100	303 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	YNL181W	P53878	407 aa		4.61	□□□□□ -1.67
RSC30	YHR056C	SYC1	Q08553	188 aa	Predicted RBP	4.61	□□□□□ -1.67
RSC30	YHR056C	RRP7	P25368	297 aa	Predicted RBP	4.6	□□□□□ -1.67
RSC30	YHR056C	TIF3	P34167	436 aa	Known RBP	4.6	□□□□□ -1.67
RSC30	YHR056C	MCH2	P36032	473 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	PEX32	P38292	413 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	YHR218W	P38899	603 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	APJ1	P53940	528 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	YDR248C	Q03786	193 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	YOL029C	Q08187	201 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	BOS1	P25385	244 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	PUT3	P25502	979 aa	Predicted RBP	4.6	□□□□□ -1.67
RSC30	YHR056C	ANR2	P36090	516 aa	Predicted RBP	4.6	□□□□□ -1.67
RSC30	YHR056C	SWD1	P39706	426 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	MPM1	P40364	252 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	SLM1	P40485	686 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	YNR048W	P53740	393 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	MSS11	Q03825	758 aa		4.6	□□□□□ -1.67
RSC30	YHR056C	OPI3	P05375	206 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	SGA1	P08019	549 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	YMR085W	P0CF18	432 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	PHO85	P17157	305 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	CLB4	P24871	460 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms