RNA–Protein interactions for RNA: YGR166W

TRS65, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS65, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS65	YGR166W	COX5A	P00424	153 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	ARO3	P14843	370 aa	Known RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	EPT1	P22140	391 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	RDS1	P25611	832 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	ITR2	P30606	609 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	YPS1	P32329	569 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	RAD5	P32849	1169 aa	Predicted RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	SPO23	P33757	523 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	RPS27A	P35997	82 aa	Known RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	TPO5	P36029	618 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	KAP104	P38217	918 aa	Known RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	NTC20	P38302	140 aa	Predicted RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	RPS27B	P38711	82 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	YHL037C	P38733	133 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	MNL1	P38888	796 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	STN1	P38960	494 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	YER079W	P40052	210 aa	Known RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	YFL064C	P43540	174 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	IRC6	P43615	237 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	CIN2	P46670	268 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	HSH155	P49955	971 aa	Known RBP	0.44	□□□□□ -2.34
TRS65	YGR166W	SBH2	P52871	88 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	ASA1	Q06822	443 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	APC5	Q08683	685 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	YPR202W	Q08993	238 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	YOL107W	Q12239	342 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	MTR10	Q99189	972 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	AI5_BETA	Q9ZZX0	354 aa		0.44	□□□□□ -2.34
TRS65	YGR166W	HIS1	P00498	297 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	CPA1	P07258	411 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	GAL7	P08431	366 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	RPS18A	P0CX55	146 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	RPS18B	P0CX56	146 aa	Predicted RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	CKA1	P15790	372 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	MET16	P18408	261 aa	Predicted RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	OPI1	P21957	404 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	UBA1	P22515	1024 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	RBK1	P25332	333 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	ZIP1	P31111	875 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	DBF4	P32325	704 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	MEI5	P32489	222 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	VMA11	P32842	164 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	YBR241C	P38142	488 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	YBR220C	P38318	560 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	TRS20	P38334	175 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	LSM12	P38828	187 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	YIL001W	P40560	513 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	LCB2	P40970	561 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	ARF3	P40994	183 aa	RIP-Chip data	0.43	□□□□□ -2.34	not detected
TRS65	YGR166W	AIP1	P46680	615 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	HOC1	P47124	396 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	RRN9	P53437	365 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	REX2	P54964	269 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	CIK1	Q01649	594 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	SKO1	Q02100	647 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	KAP120	Q02932	1032 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	ABP140	Q08641	628 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	YOR114W	Q12219	294 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	PRP46	Q12417	451 aa	Predicted RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	HTZ1	Q12692	134 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	YOR338W	Q99326	363 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	SLH1	P53327	1967 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	BLM10	P43583	2143 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	CDC21	P06785	304 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	DST1	P07273	309 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	THR4	P16120	514 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	COX10	P21592	462 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	DPB3	P27344	201 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	CLG1	P35190	452 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	YBR062C	P38239	180 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	RBG1	P39729	369 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	YEL073C	P39974	107 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	SCC4	P40090	624 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	SEC27	P41811	889 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	RPE1	P46969	238 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	EMC2	P47133	292 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	ADO1	P47143	340 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	ASN2	P49090	572 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	BIO3	P50277	480 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	PMT5	P52867	743 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	CDC14	Q00684	551 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	MRX11	Q03079	207 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	CGI121	Q03705	181 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	ARO80	Q04052	950 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	RPN9	Q04062	393 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	YMR310C	Q04867	317 aa	Predicted RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	FUS2	Q05670	677 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	KAP95	Q06142	861 aa	Known RBP	0.43	□□□□□ -2.34
TRS65	YGR166W	DCS1	Q06151	350 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	LDS2	Q08218	356 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	SFM1	Q12314	213 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	RTN2	Q12443	393 aa		0.43	□□□□□ -2.34
TRS65	YGR166W	STE3	P06783	470 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	YSF3	P0C074	85 aa	Predicted RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	YSR3	P23501	404 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	PHO84	P25297	587 aa	Known RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	DAL80	P26343	269 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	SPS19	P32573	292 aa	Known RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	SWI3	P32591	825 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	GCG1	P32656	232 aa	Known RBP	0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms