RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C GAL10P04397 699 aa4.48□□□□□ -1.69
SEC9YGR009C ADK1P07170 222 aaKnown RBP4.48□□□□□ -1.69
SEC9YGR009C COR1P07256 457 aa4.48□□□□□ -1.69
SEC9YGR009C MGT1P26188 188 aa4.48□□□□□ -1.69
SEC9YGR009C GAC1P28006 793 aa4.48□□□□□ -1.69
SEC9YGR009C MRPL9P31334 269 aa4.48□□□□□ -1.69
SEC9YGR009C STE14P32584 239 aa4.48□□□□□ -1.69
SEC9YGR009C SEC17P32602 292 aa4.48□□□□□ -1.69
SEC9YGR009C FRE2P36033 711 aa4.48□□□□□ -1.69
SEC9YGR009C DOG2P38773 246 aa4.48□□□□□ -1.69
SEC9YGR009C RPA43P46669 326 aa4.48□□□□□ -1.69
SEC9YGR009C DIE2P50076 525 aa4.48□□□□□ -1.69
SEC9YGR009C POP6P53218 158 aa4.48□□□□□ -1.69
SEC9YGR009C TSA2Q04120 196 aa4.48□□□□□ -1.69
SEC9YGR009C TRM12Q04235 462 aa4.48□□□□□ -1.69
SEC9YGR009C HSP31Q04432 237 aa4.48□□□□□ -1.69
SEC9YGR009C SUE1Q06524 206 aa4.48□□□□□ -1.69
SEC9YGR009C LDS2Q08218 356 aa4.48□□□□□ -1.69
SEC9YGR009C ENV7Q12003 364 aa4.48□□□□□ -1.69
SEC9YGR009C MDM32Q12171 622 aa4.48□□□□□ -1.69
SEC9YGR009C RAX2Q12465 1220 aa4.48□□□□□ -1.69
SEC9YGR009C YLR099W-AQ3E798 87 aa4.48□□□□□ -1.69
SEC9YGR009C REP2P03872 296 aa4.47□□□□□ -1.69
SEC9YGR009C GRX2P17695 143 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C SCO1P23833 295 aa4.47□□□□□ -1.69
SEC9YGR009C PMI40P29952 429 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C LDS1P31379 325 aa4.47□□□□□ -1.69
SEC9YGR009C MSK1P32048 576 aa4.47□□□□□ -1.69
SEC9YGR009C FRM2P37261 193 aa4.47□□□□□ -1.69
SEC9YGR009C ASC1P38011 319 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C APN2P38207 520 aa4.47□□□□□ -1.69
SEC9YGR009C YPC1P38298 316 aa4.47□□□□□ -1.69
SEC9YGR009C YHR033WP38690 423 aa4.47□□□□□ -1.69
SEC9YGR009C SSN3P39073 555 aa4.47□□□□□ -1.69
SEC9YGR009C ELO1P39540 310 aa4.47□□□□□ -1.69
SEC9YGR009C YJL193WP39542 402 aa4.47□□□□□ -1.69
SEC9YGR009C YAL037WP39728 267 aa4.47□□□□□ -1.69
SEC9YGR009C MNN10P50108 393 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C AVT4P50944 713 aa4.47□□□□□ -1.69
SEC9YGR009C PHO23P50947 330 aa4.47□□□□□ -1.69
SEC9YGR009C COX18P53239 316 aa4.47□□□□□ -1.69
SEC9YGR009C MSO1P53604 210 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C HST3P53687 447 aa4.47□□□□□ -1.69
SEC9YGR009C ERG13P54839 491 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C YMR206WQ03695 313 aa4.47□□□□□ -1.69
SEC9YGR009C YMR310CQ04867 317 aaPredicted RBP4.47□□□□□ -1.69
SEC9YGR009C TRM10Q12400 293 aa4.47□□□□□ -1.69
SEC9YGR009C SPO24Q3E752 67 aa4.47□□□□□ -1.69
SEC9YGR009C YCR075W-AQ3E830 75 aa4.47□□□□□ -1.69
SEC9YGR009C MF(ALPHA)1P01149 165 aa4.47□□□□□ -1.69
SEC9YGR009C YFR010W-AP0C5N0 62 aa4.47□□□□□ -1.69
SEC9YGR009C CPR1P14832 162 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C RPB8P20436 146 aa4.47□□□□□ -1.69
SEC9YGR009C ELO2P25358 347 aa4.47□□□□□ -1.69
SEC9YGR009C POF1P25576 258 aa4.47□□□□□ -1.69
SEC9YGR009C THI80P35202 319 aa4.47□□□□□ -1.69
SEC9YGR009C PAN3P36102 679 aaPredicted RBP4.47□□□□□ -1.69
SEC9YGR009C YKR041WP36134 250 aa4.47□□□□□ -1.69
SEC9YGR009C RTC2P38279 296 aa4.47□□□□□ -1.69
SEC9YGR009C YPT35P38815 214 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C ARO9P38840 513 aaPredicted RBP4.47□□□□□ -1.69
SEC9YGR009C MEP2P41948 499 aa4.47□□□□□ -1.69
SEC9YGR009C TRM9P49957 279 aa4.47□□□□□ -1.69
SEC9YGR009C SED5Q01590 340 aa4.47□□□□□ -1.69
SEC9YGR009C YLR407WQ06070 228 aa4.47□□□□□ -1.69
SEC9YGR009C TMA10Q06177 86 aa4.47□□□□□ -1.69
SEC9YGR009C YLR446WQ06204 433 aa4.47□□□□□ -1.69
SEC9YGR009C MCH1Q07376 486 aa4.47□□□□□ -1.69
SEC9YGR009C YOR283WQ12040 230 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C LPX1Q12405 387 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C ERG27Q12452 347 aaKnown RBP4.47□□□□□ -1.69
SEC9YGR009C SPT6P23615 1451 aaKnown RBP4.46□□□□□ -1.69
SEC9YGR009C YCF1P39109 1515 aaKnown RBP4.46□□□□□ -1.69
SEC9YGR009C SDH2P21801 266 aa4.46□□□□□ -1.7
SEC9YGR009C BUB2P26448 306 aaPredicted RBP4.46□□□□□ -1.7
SEC9YGR009C HOM6P31116 359 aaKnown RBP4.46□□□□□ -1.7
SEC9YGR009C IES6P32617 166 aa4.46□□□□□ -1.7
SEC9YGR009C OMA1P36163 345 aa4.46□□□□□ -1.7
SEC9YGR009C KTR3P38130 404 aaPredicted RBP4.46□□□□□ -1.7
SEC9YGR009C ERV15P38312 142 aa4.46□□□□□ -1.7
SEC9YGR009C PRE6P40303 254 aaKnown RBP4.46□□□□□ -1.7
SEC9YGR009C GLR1P41921 483 aaKnown RBP4.46□□□□□ -1.7
SEC9YGR009C RPN11P43588 306 aaKnown RBP4.46□□□□□ -1.7
SEC9YGR009C LSB3P43603 459 aaKnown RBP4.46□□□□□ -1.7
SEC9YGR009C CHA4P43634 648 aa4.46□□□□□ -1.7
SEC9YGR009C CTR1P49573 406 aa4.46□□□□□ -1.7
SEC9YGR009C MMS2P53152 137 aa4.46□□□□□ -1.7
SEC9YGR009C CDH1P53197 566 aa4.46□□□□□ -1.7
SEC9YGR009C TRM44Q02648 567 aaKnown RBP4.46□□□□□ -1.7
SEC9YGR009C GOT1Q03554 138 aa4.46□□□□□ -1.7
SEC9YGR009C FMN1Q03778 218 aa4.46□□□□□ -1.7
SEC9YGR009C TPP1Q03796 238 aa4.46□□□□□ -1.7
SEC9YGR009C YTH1Q06102 208 aaPredicted RBP4.46□□□□□ -1.7
SEC9YGR009C AIM6Q07716 390 aa4.46□□□□□ -1.7
SEC9YGR009C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SEC9YGR009C YPL260WQ08977 551 aa4.46□□□□□ -1.7
SEC9YGR009C WTM2Q12206 467 aa4.46□□□□□ -1.7
SEC9YGR009C YCT1Q12235 531 aa4.46□□□□□ -1.7
SEC9YGR009C YDL199CQ12407 687 aa4.46□□□□□ -1.7
SEC9YGR009C RSF2P46974 1380 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms