RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YIA6P40556 373 aa2.81□□□□□ -1.96
PRP18YGR006W ASG7P46993 209 aa2.81□□□□□ -1.96
PRP18YGR006W LIF1P53150 421 aa2.81□□□□□ -1.96
PRP18YGR006W ZRG17P53735 605 aa2.81□□□□□ -1.96
PRP18YGR006W YNL050CP53952 270 aa2.81□□□□□ -1.96
PRP18YGR006W ARC18Q05933 178 aaKnown RBP2.81□□□□□ -1.96
PRP18YGR006W KAP95Q06142 861 aaKnown RBP2.81□□□□□ -1.96
PRP18YGR006W TDH1P00360 332 aaKnown RBP2.8□□□□□ -1.96
PRP18YGR006W CDC42P19073 191 aa2.8□□□□□ -1.96
PRP18YGR006W ICL1P28240 557 aaPredicted RBP2.8□□□□□ -1.96
PRP18YGR006W YKT6P36015 200 aaKnown RBP2.8□□□□□ -1.96
PRP18YGR006W VAB2P40003 282 aa2.8□□□□□ -1.96
PRP18YGR006W PFS2P42841 465 aaKnown RBP2.8□□□□□ -1.96
PRP18YGR006W YFL064CP43540 174 aa2.8□□□□□ -1.96
PRP18YGR006W LIA1P47120 325 aaKnown RBP2.8□□□□□ -1.96
PRP18YGR006W YPT32P51996 222 aaKnown RBP2.8□□□□□ -1.96
PRP18YGR006W YGL185CP53100 379 aa2.8□□□□□ -1.96
PRP18YGR006W TY3A-GQ12173 290 aa2.8□□□□□ -1.96
PRP18YGR006W ADF1Q2V2Q1 113 aa2.8□□□□□ -1.96
PRP18YGR006W TY3A-IQ99219 290 aa2.8□□□□□ -1.96
PRP18YGR006W ILV1P00927 576 aaKnown RBP2.79□□□□□ -1.96
PRP18YGR006W TFS1P14306 219 aa2.79□□□□□ -1.96
PRP18YGR006W AST1P35183 429 aa2.79□□□□□ -1.96
PRP18YGR006W YKL070WP36087 169 aa2.79□□□□□ -1.96
PRP18YGR006W SHQ1P40486 507 aaPredicted RBP2.79□□□□□ -1.96
PRP18YGR006W MND1P53102 219 aa2.79□□□□□ -1.96
PRP18YGR006W ACT1P60010 375 aaKnown RBP2.79□□□□□ -1.96
PRP18YGR006W PEX30Q06169 523 aa2.79□□□□□ -1.96
PRP18YGR006W SMD2Q06217 110 aaKnown RBP2.79□□□□□ -1.96
PRP18YGR006W YPL278CQ08990 100 aa2.79□□□□□ -1.96
PRP18YGR006W DAL81P21657 970 aa2.78□□□□□ -1.96
PRP18YGR006W VPS3P23643 1011 aa2.78□□□□□ -1.96
PRP18YGR006W YBR062CP38239 180 aa2.78□□□□□ -1.96
PRP18YGR006W COS4P43542 379 aa2.78□□□□□ -1.96
PRP18YGR006W MPP6P53725 186 aaPredicted RBP2.78□□□□□ -1.96
PRP18YGR006W GIM3P53900 129 aa2.78□□□□□ -1.96
PRP18YGR006W YMR209CQ03648 457 aa2.78□□□□□ -1.96
PRP18YGR006W TAZ1Q06510 381 aa2.78□□□□□ -1.96
PRP18YGR006W POM33Q12164 279 aa2.78□□□□□ -1.96
PRP18YGR006W PRP46Q12417 451 aaPredicted RBP2.78□□□□□ -1.96
PRP18YGR006W PRM7Q12459 698 aa2.78□□□□□ -1.96
PRP18YGR006W SSA3P09435 649 aaKnown RBP2.77□□□□□ -1.97
PRP18YGR006W FRS2P15625 503 aaKnown RBP2.77□□□□□ -1.97
PRP18YGR006W AEP1P32493 518 aa2.77□□□□□ -1.97
PRP18YGR006W DOA4P32571 926 aa2.77□□□□□ -1.97
PRP18YGR006W COT1P32798 439 aa2.77□□□□□ -1.97
PRP18YGR006W SPT4P32914 102 aaPredicted RBP2.77□□□□□ -1.97
PRP18YGR006W PRY2P36110 329 aa2.77□□□□□ -1.97
PRP18YGR006W MRPL3P36516 390 aa2.77□□□□□ -1.97
PRP18YGR006W SLX1P38324 304 aa2.77□□□□□ -1.97
PRP18YGR006W KRE29P40026 464 aa2.77□□□□□ -1.97
PRP18YGR006W MRX5P47007 382 aa2.77□□□□□ -1.97
PRP18YGR006W PRP24P49960 444 aaKnown RBP2.77□□□□□ -1.97
PRP18YGR006W SNZ1Q03148 297 aa2.77□□□□□ -1.97
PRP18YGR006W CSI1Q04368 295 aa2.77□□□□□ -1.97
PRP18YGR006W DPP1Q05521 289 aa2.77□□□□□ -1.97
PRP18YGR006W FMP16Q12497 93 aa2.77□□□□□ -1.97
PRP18YGR006W IMP1P28627 190 aa2.76□□□□□ -1.97
PRP18YGR006W RME1P32338 300 aaKnown RBP2.76□□□□□ -1.97
PRP18YGR006W SUA5P32579 426 aa2.76□□□□□ -1.97
PRP18YGR006W MSN4P33749 630 aa2.76□□□□□ -1.97
PRP18YGR006W MRPL37P36532 105 aa2.76□□□□□ -1.97
PRP18YGR006W MBA1P38300 278 aa2.76□□□□□ -1.97
PRP18YGR006W YIL059CP40520 121 aa2.76□□□□□ -1.97
PRP18YGR006W HOP2P53187 214 aa2.76□□□□□ -1.97
PRP18YGR006W COG7P53195 279 aa2.76□□□□□ -1.97
PRP18YGR006W YNL040WP53960 456 aaPredicted RBP2.76□□□□□ -1.97
PRP18YGR006W YML018CQ03730 393 aa2.76□□□□□ -1.97
PRP18YGR006W YPR195CQ06594 109 aa2.76□□□□□ -1.97
PRP18YGR006W YPL264CQ08980 353 aa2.76□□□□□ -1.97
PRP18YGR006W ASF2P32448 525 aaPredicted RBP2.75□□□□□ -1.97
PRP18YGR006W KRE6P32486 720 aa2.75□□□□□ -1.97
PRP18YGR006W RPT5P33297 434 aaKnown RBP2.75□□□□□ -1.97
PRP18YGR006W TCD1P38756 429 aa2.75□□□□□ -1.97
PRP18YGR006W YIL012WP40551 113 aa2.75□□□□□ -1.97
PRP18YGR006W CPR7P47103 393 aa2.75□□□□□ -1.97
PRP18YGR006W UFD1P53044 361 aa2.75□□□□□ -1.97
PRP18YGR006W CGR1P53188 120 aa2.75□□□□□ -1.97
PRP18YGR006W CPD1P53314 239 aa2.75□□□□□ -1.97
PRP18YGR006W TAF9Q05027 157 aa2.75□□□□□ -1.97
PRP18YGR006W ARG80P07249 177 aa2.74□□□□□ -1.97
PRP18YGR006W YSR3P23501 404 aa2.74□□□□□ -1.97
PRP18YGR006W ARO4P32449 370 aaKnown RBP2.74□□□□□ -1.97
PRP18YGR006W AGA2P32781 87 aa2.74□□□□□ -1.97
PRP18YGR006W MED8P38304 223 aa2.74□□□□□ -1.97
PRP18YGR006W YHL044WP38727 235 aa2.74□□□□□ -1.97
PRP18YGR006W EMC2P47133 292 aaKnown RBP2.74□□□□□ -1.97
PRP18YGR006W TPN1P53099 579 aa2.74□□□□□ -1.97
PRP18YGR006W SPP2Q02521 185 aa2.74□□□□□ -1.97
PRP18YGR006W YPL113CQ02961 396 aa2.74□□□□□ -1.97
PRP18YGR006W SSQ1Q05931 657 aaPredicted RBP2.74□□□□□ -1.97
PRP18YGR006W YDL144CQ07589 356 aa2.74□□□□□ -1.97
PRP18YGR006W YPR063CQ12160 140 aa2.74□□□□□ -1.97
PRP18YGR006W YOR114WQ12219 294 aa2.74□□□□□ -1.97
PRP18YGR006W IES3Q12345 250 aa2.74□□□□□ -1.97
PRP18YGR006W GIS3Q12418 502 aa2.74□□□□□ -1.97
PRP18YGR006W YAL063C-AQ3E791 96 aa2.74□□□□□ -1.97
PRP18YGR006W CFT1Q06632 1357 aaKnown RBP2.74□□□□□ -1.97
PRP18YGR006W OSM1P21375 501 aaKnown RBP2.73□□□□□ -1.97
PRP18YGR006W VPS1P21576 704 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms