RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A YPR064WQ12492 139 aa2.48□□□□□ -2.01
YFL002W-AYFL002W-A SPT3P06844 337 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A SGE1P33335 543 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A MBA1P38300 278 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A SDS24P38314 527 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A UBP5P39944 805 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A UTP15Q04305 513 aaKnown RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A THP3Q12049 470 aaKnown RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A HEM4P06174 275 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A SNF6P18888 332 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A MEI4P29467 408 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A COS10P52924 374 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A SWC4P53201 476 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A SDC1Q03323 175 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A FCY22Q12119 530 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A KDX1P36005 433 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A SNO3P43544 222 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A YJR012CP47087 207 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A VAC7P53950 1165 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A YPL199CQ08954 240 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A CMK2P22517 447 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A RPL16AP26784 199 aaKnown RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A PMU1P36069 295 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A ANR2P36090 516 aaPredicted RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A FES1P38260 290 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A DFG10P40526 253 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A MRPL49P40858 161 aaPredicted RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A SNZ3P43545 298 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A YGL159WP53110 370 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A MSO1P53604 210 aaKnown RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A SNZ2P53824 298 aa2.47□□□□□ -2.01
YFL002W-AYFL002W-A TPS1Q00764 495 aaKnown RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A ARC18Q05933 178 aaKnown RBP2.47□□□□□ -2.01
YFL002W-AYFL002W-A MET2P08465 486 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A ATR1P13090 542 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A MIR1P23641 311 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A CDC10P25342 322 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A AIM23P47015 356 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YJR085CP47131 105 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A YJR141WP47172 347 aaPredicted RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A OST3P48439 350 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A USE1P53146 245 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A ERP1Q05359 219 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A CTR3Q06686 241 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A GPM2Q12008 311 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A USB1Q12208 290 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A RPL15AP05748 204 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A AEP1P32493 518 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A RFT1P38206 574 aaPredicted RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A CPR7P47103 393 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A SNA3P14359 133 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YCR025CP25352 136 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A NAM9P27929 486 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A TMA22P47089 198 aaPredicted RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A TRM9P49957 279 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A BNS1P50084 137 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A JAC1P53193 184 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YNL247WP53852 767 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A DSE3Q08729 430 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A VIK1Q12045 647 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YDL109CQ12103 647 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YHR139C-AO13536 103 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A RPL20AP0CX23 172 aaKnown RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A RPL20BP0CX24 172 aaPredicted RBP2.46□□□□□ -2.02
YFL002W-AYFL002W-A COG3P40094 801 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YPR091CQ06833 770 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YOR376WQ08900 122 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A DAP1Q12091 152 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A RFM1Q12192 310 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A STH1P32597 1359 aa2.46□□□□□ -2.02
YFL002W-AYFL002W-A YAL064W-BO13512 126 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A AME1P38313 324 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A YND1P40009 630 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A YNL320WP42840 284 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A YDC1Q02896 317 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A DPP1Q05521 289 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A PEX10Q05568 337 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A AI5_BETAQ9ZZX0 354 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A GIT1P25346 518 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A AST1P35183 429 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A MTC6P38849 526 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A YDR209CQ03480 137 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A MUM3Q08750 479 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A BCY1P07278 416 aaKnown RBP2.45□□□□□ -2.02
YFL002W-AYFL002W-A YAK1P14680 807 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A CBS2P14905 389 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A IDH1P28834 360 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
YFL002W-AYFL002W-A SLX9P53251 210 aaPredicted RBP2.45□□□□□ -2.02
YFL002W-AYFL002W-A ASI3P53983 676 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A PRM6Q04705 352 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A SEC10Q06245 871 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A FBA1P14540 359 aaKnown RBP2.45□□□□□ -2.02
YFL002W-AYFL002W-A GRX2P17695 143 aaKnown RBP2.45□□□□□ -2.02
YFL002W-AYFL002W-A DEP1P31385 405 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A YKR041WP36134 250 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A DIM1P41819 318 aaKnown RBP2.45□□□□□ -2.02
YFL002W-AYFL002W-A HCH1P53834 153 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A YLR152CP54072 576 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A SNO1Q03144 224 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A SEI1Q06058 285 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms