RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C TFS1P14306 219 aa1.24□□□□□ -2.21
SWI5YDR146C PHO80P20052 293 aa1.24□□□□□ -2.21
SWI5YDR146C ALK2P32789 676 aaPredicted RBP1.24□□□□□ -2.21
SWI5YDR146C MRPL6P32904 214 aa1.24□□□□□ -2.21
SWI5YDR146C TKL2P33315 681 aa1.24□□□□□ -2.21
SWI5YDR146C YER084WP40057 128 aa1.24□□□□□ -2.21
SWI5YDR146C ARP5P53946 755 aa1.24□□□□□ -2.21
SWI5YDR146C DIA1P54005 336 aa1.24□□□□□ -2.21
SWI5YDR146C BCP1Q06338 283 aa1.24□□□□□ -2.21
SWI5YDR146C YPL278CQ08990 100 aa1.24□□□□□ -2.21
SWI5YDR146C PET494P07390 489 aaPredicted RBP1.23□□□□□ -2.21
SWI5YDR146C ZWF1P11412 505 aaKnown RBP1.23□□□□□ -2.21
SWI5YDR146C MEK1P24719 497 aaPredicted RBP1.23□□□□□ -2.21
SWI5YDR146C SUA5P32579 426 aa1.23□□□□□ -2.21
SWI5YDR146C YKL063CP35725 167 aa1.23□□□□□ -2.21
SWI5YDR146C FMP33P46998 180 aa1.23□□□□□ -2.21
SWI5YDR146C IBA57P47158 497 aa1.23□□□□□ -2.21
SWI5YDR146C YNL260CP53846 198 aa1.23□□□□□ -2.21
SWI5YDR146C YML018CQ03730 393 aa1.23□□□□□ -2.21
SWI5YDR146C ASR1Q06834 288 aa1.23□□□□□ -2.21
SWI5YDR146C TDH1P00360 332 aaKnown RBP1.22□□□□□ -2.21
SWI5YDR146C YAK1P14680 807 aa1.22□□□□□ -2.21
SWI5YDR146C SPT4P32914 102 aaPredicted RBP1.22□□□□□ -2.21
SWI5YDR146C YBL081WP38180 368 aaKnown RBP1.22□□□□□ -2.21
SWI5YDR146C HIS2P38635 335 aa1.22□□□□□ -2.21
SWI5YDR146C AVT6P40074 448 aa1.22□□□□□ -2.21
SWI5YDR146C YIL012WP40551 113 aa1.22□□□□□ -2.21
SWI5YDR146C PRP24P49960 444 aaKnown RBP1.22□□□□□ -2.21
SWI5YDR146C DPP1Q05521 289 aa1.22□□□□□ -2.21
SWI5YDR146C BER1Q06688 274 aaKnown RBP1.22□□□□□ -2.21
SWI5YDR146C FEX1Q08913 375 aa1.22□□□□□ -2.21
SWI5YDR146C FEX2Q08991 375 aa1.22□□□□□ -2.21
SWI5YDR146C PRR2Q12310 699 aa1.22□□□□□ -2.21
SWI5YDR146C ATG5Q12380 294 aa1.22□□□□□ -2.21
SWI5YDR146C OST3P48439 350 aa1.22□□□□□ -2.21
SWI5YDR146C LSB1P53281 241 aa1.22□□□□□ -2.21
SWI5YDR146C SDC1Q03323 175 aa1.22□□□□□ -2.21
SWI5YDR146C VBA1Q04301 562 aa1.22□□□□□ -2.21
SWI5YDR146C ARC18Q05933 178 aaKnown RBP1.22□□□□□ -2.21
SWI5YDR146C RRP42Q12277 265 aaPredicted RBP1.22□□□□□ -2.21
SWI5YDR146C IES3Q12345 250 aa1.22□□□□□ -2.21
SWI5YDR146C MET2P08465 486 aa1.21□□□□□ -2.22
SWI5YDR146C KRE1P17260 313 aa1.21□□□□□ -2.22
SWI5YDR146C DAL80P26343 269 aa1.21□□□□□ -2.22
SWI5YDR146C MIG1P27705 504 aa1.21□□□□□ -2.22
SWI5YDR146C IMP1P28627 190 aa1.21□□□□□ -2.22
SWI5YDR146C YKL070WP36087 169 aa1.21□□□□□ -2.22
SWI5YDR146C PCL7P40186 285 aa1.21□□□□□ -2.22
SWI5YDR146C AVT7P40501 490 aa1.21□□□□□ -2.22
SWI5YDR146C ECO1P43605 281 aa1.21□□□□□ -2.22
SWI5YDR146C YGL088WP53151 121 aa1.21□□□□□ -2.22
SWI5YDR146C CDC14Q00684 551 aa1.21□□□□□ -2.22
SWI5YDR146C TVP15Q03860 143 aa1.21□□□□□ -2.22
SWI5YDR146C RPP0P05317 312 aaKnown RBP1.21□□□□□ -2.22
SWI5YDR146C RPC40P07703 335 aaKnown RBP1.21□□□□□ -2.22
SWI5YDR146C COS2P0CX12 379 aa1.21□□□□□ -2.22
SWI5YDR146C COS3P0CX13 379 aa1.21□□□□□ -2.22
SWI5YDR146C OSM1P21375 501 aaKnown RBP1.21□□□□□ -2.22
SWI5YDR146C RPS0AP32905 252 aaKnown RBP1.21□□□□□ -2.22
SWI5YDR146C TRM7P38238 310 aaKnown RBP1.21□□□□□ -2.22
SWI5YDR146C ATG12P38316 186 aa1.21□□□□□ -2.22
SWI5YDR146C SEN34P39707 275 aa1.21□□□□□ -2.22
SWI5YDR146C KRE29P40026 464 aa1.21□□□□□ -2.22
SWI5YDR146C BUD13P46947 266 aaPredicted RBP1.21□□□□□ -2.22
SWI5YDR146C KEL2P50090 882 aa1.21□□□□□ -2.22
SWI5YDR146C YNL050CP53952 270 aa1.21□□□□□ -2.22
SWI5YDR146C MRS2Q01926 470 aa1.21□□□□□ -2.22
SWI5YDR146C TRM44Q02648 567 aaKnown RBP1.21□□□□□ -2.22
SWI5YDR146C VPS60Q03390 229 aa1.21□□□□□ -2.22
SWI5YDR146C FMP16Q12497 93 aa1.21□□□□□ -2.22
SWI5YDR146C RPS3P05750 240 aaKnown RBP1.2□□□□□ -2.22
SWI5YDR146C RSA4P25382 515 aaKnown RBP1.2□□□□□ -2.22
SWI5YDR146C COT1P32798 439 aa1.2□□□□□ -2.22
SWI5YDR146C POP8P38208 133 aa1.2□□□□□ -2.22
SWI5YDR146C NPT1P39683 429 aaKnown RBP1.2□□□□□ -2.22
SWI5YDR146C SER33P40510 469 aa1.2□□□□□ -2.22
SWI5YDR146C FMP41P53889 259 aaKnown RBP1.2□□□□□ -2.22
SWI5YDR146C YNL095CP53932 642 aa1.2□□□□□ -2.22
SWI5YDR146C EGD1Q02642 157 aaKnown RBP1.2□□□□□ -2.22
SWI5YDR146C YMR209CQ03648 457 aa1.2□□□□□ -2.22
SWI5YDR146C TAF9Q05027 157 aa1.2□□□□□ -2.22
SWI5YDR146C FCF1Q05498 189 aaPredicted RBP1.2□□□□□ -2.22
SWI5YDR146C GPN3Q06543 272 aa1.2□□□□□ -2.22
SWI5YDR146C YLR413WQ06689 675 aa1.2□□□□□ -2.22
SWI5YDR146C RLP24Q07915 199 aaKnown RBP1.2□□□□□ -2.22
SWI5YDR146C POM33Q12164 279 aa1.2□□□□□ -2.22
SWI5YDR146C MRX4Q12467 430 aa1.2□□□□□ -2.22
SWI5YDR146C AGC1Q12482 902 aa1.2□□□□□ -2.22
SWI5YDR146C MRPL23Q12487 163 aaPredicted RBP1.2□□□□□ -2.22
SWI5YDR146C YAL064W-BO13512 126 aa1.19□□□□□ -2.22
SWI5YDR146C YPR096CO13587 100 aa1.19□□□□□ -2.22
SWI5YDR146C HIS3P06633 220 aa1.19□□□□□ -2.22
SWI5YDR146C CSM1P25651 190 aa1.19□□□□□ -2.22
SWI5YDR146C YIA6P40556 373 aa1.19□□□□□ -2.22
SWI5YDR146C MND1P53102 219 aa1.19□□□□□ -2.22
SWI5YDR146C YDR114CQ04597 100 aa1.19□□□□□ -2.22
SWI5YDR146C NNT1Q05874 261 aa1.19□□□□□ -2.22
SWI5YDR146C ARV1Q06541 321 aa1.19□□□□□ -2.22
SWI5YDR146C CLP1Q08685 445 aaPredicted RBP1.19□□□□□ -2.22
SWI5YDR146C YBL112CQ3E7Y4 105 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 130.4 ms