RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YGR018CP53211 109 aa3.18□□□□□ -1.9
SHU2YDR078C INP1Q03694 420 aa3.18□□□□□ -1.9
SHU2YDR078C YML018CQ03730 393 aa3.18□□□□□ -1.9
SHU2YDR078C SFH1Q06168 426 aa3.18□□□□□ -1.9
SHU2YDR078C BSC6Q08280 497 aa3.18□□□□□ -1.9
SHU2YDR078C TRM10Q12400 293 aa3.18□□□□□ -1.9
SHU2YDR078C RAX2Q12465 1220 aa3.18□□□□□ -1.9
SHU2YDR078C YOL085CQ99345 113 aa3.18□□□□□ -1.9
SHU2YDR078C HIS1P00498 297 aaKnown RBP3.17□□□□□ -1.9
SHU2YDR078C TPI1P00942 248 aaKnown RBP3.17□□□□□ -1.9
SHU2YDR078C RPS3P05750 240 aaKnown RBP3.17□□□□□ -1.9
SHU2YDR078C MRP1P10662 321 aaKnown RBP3.17□□□□□ -1.9
SHU2YDR078C DAL81P21657 970 aa3.17□□□□□ -1.9
SHU2YDR078C VPH2P32341 215 aa3.17□□□□□ -1.9
SHU2YDR078C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
SHU2YDR078C PRS4P38063 326 aaPredicted RBP3.17□□□□□ -1.9
SHU2YDR078C MBA1P38300 278 aa3.17□□□□□ -1.9
SHU2YDR078C BIG1P38813 335 aa3.17□□□□□ -1.9
SHU2YDR078C RNY1Q02933 434 aaKnown RBP3.17□□□□□ -1.9
SHU2YDR078C MCH1Q07376 486 aa3.17□□□□□ -1.9
SHU2YDR078C SDO1Q07953 250 aaKnown RBP3.17□□□□□ -1.9
SHU2YDR078C PER33Q12144 273 aa3.17□□□□□ -1.9
SHU2YDR078C YAL067W-AQ8TGK6 75 aa3.17□□□□□ -1.9
SHU2YDR078C ADH1P00330 348 aaKnown RBP3.16□□□□□ -1.9
SHU2YDR078C RPP0P05317 312 aaKnown RBP3.16□□□□□ -1.9
SHU2YDR078C ZIP1P31111 875 aa3.16□□□□□ -1.9
SHU2YDR078C ARO4P32449 370 aaKnown RBP3.16□□□□□ -1.9
SHU2YDR078C FRM2P37261 193 aa3.16□□□□□ -1.9
SHU2YDR078C ATG12P38316 186 aa3.16□□□□□ -1.9
SHU2YDR078C PRS2P38620 318 aaKnown RBP3.16□□□□□ -1.9
SHU2YDR078C FMC1P40491 155 aa3.16□□□□□ -1.9
SHU2YDR078C MIC19P43594 170 aa3.16□□□□□ -1.9
SHU2YDR078C MNT4P53745 580 aa3.16□□□□□ -1.9
SHU2YDR078C PET117Q02771 107 aa3.16□□□□□ -1.9
SHU2YDR078C VPS60Q03390 229 aa3.16□□□□□ -1.9
SHU2YDR078C YMR244WQ04018 355 aa3.16□□□□□ -1.9
SHU2YDR078C UTP15Q04305 513 aaKnown RBP3.16□□□□□ -1.9
SHU2YDR078C ATG31Q12421 196 aa3.16□□□□□ -1.9
SHU2YDR078C ZRT3P34240 503 aa3.15□□□□□ -1.91
SHU2YDR078C MRPL3P36516 390 aa3.15□□□□□ -1.91
SHU2YDR078C SHC1P39000 512 aa3.15□□□□□ -1.91
SHU2YDR078C YFL064CP43540 174 aa3.15□□□□□ -1.91
SHU2YDR078C ASG7P46993 209 aa3.15□□□□□ -1.91
SHU2YDR078C TIM21P53220 239 aa3.15□□□□□ -1.91
SHU2YDR078C SEC10Q06245 871 aa3.15□□□□□ -1.91
SHU2YDR078C CTR3Q06686 241 aa3.15□□□□□ -1.91
SHU2YDR078C RUD3Q12234 484 aaKnown RBP3.15□□□□□ -1.91
SHU2YDR078C YOR029WQ12243 111 aa3.15□□□□□ -1.91
SHU2YDR078C SME1Q12330 94 aaPredicted RBP3.15□□□□□ -1.91
SHU2YDR078C DFM1Q12743 341 aaKnown RBP3.15□□□□□ -1.91
SHU2YDR078C YAL064W-BO13512 126 aa3.14□□□□□ -1.91
SHU2YDR078C YCR025CP25352 136 aa3.14□□□□□ -1.91
SHU2YDR078C ATG15P25641 520 aa3.14□□□□□ -1.91
SHU2YDR078C PEX3P28795 441 aa3.14□□□□□ -1.91
SHU2YDR078C PRS1P32895 427 aaKnown RBP3.14□□□□□ -1.91
SHU2YDR078C DBP7P36120 742 aaKnown RBP3.14□□□□□ -1.91
SHU2YDR078C AIM29P36154 155 aa3.14□□□□□ -1.91
SHU2YDR078C DED81P38707 554 aaKnown RBP3.14□□□□□ -1.91
SHU2YDR078C LIF1P53150 421 aa3.14□□□□□ -1.91
SHU2YDR078C ECM19Q06011 112 aa3.14□□□□□ -1.91
SHU2YDR078C YPL278CQ08990 100 aa3.14□□□□□ -1.91
SHU2YDR078C TIR4Q12218 487 aaPredicted RBP3.14□□□□□ -1.91
SHU2YDR078C YOS9Q99220 542 aa3.14□□□□□ -1.91
SHU2YDR078C ALK2P32789 676 aaPredicted RBP3.13□□□□□ -1.91
SHU2YDR078C MRX3P38172 270 aa3.13□□□□□ -1.91
SHU2YDR078C SEO1P39709 593 aa3.13□□□□□ -1.91
SHU2YDR078C KRE29P40026 464 aa3.13□□□□□ -1.91
SHU2YDR078C AVT7P40501 490 aa3.13□□□□□ -1.91
SHU2YDR078C SER33P40510 469 aa3.13□□□□□ -1.91
SHU2YDR078C RPL10P41805 221 aaKnown RBP3.13□□□□□ -1.91
SHU2YDR078C UFE1P41834 346 aa3.13□□□□□ -1.91
SHU2YDR078C PRP24P49960 444 aaKnown RBP3.13□□□□□ -1.91
SHU2YDR078C NBP1P52919 319 aaPredicted RBP3.13□□□□□ -1.91
SHU2YDR078C COG7P53195 279 aa3.13□□□□□ -1.91
SHU2YDR078C PIN3Q06449 215 aa3.13□□□□□ -1.91
SHU2YDR078C LOA1Q06508 300 aa3.13□□□□□ -1.91
SHU2YDR078C DIB1Q06819 143 aaPredicted RBP3.13□□□□□ -1.91
SHU2YDR078C PAM18Q07914 168 aa3.13□□□□□ -1.91
SHU2YDR078C MSH5Q12175 901 aa3.13□□□□□ -1.91
SHU2YDR078C YAL063C-AQ3E791 96 aa3.13□□□□□ -1.91
SHU2YDR078C RPS19AP07280 144 aaKnown RBP3.12□□□□□ -1.91
SHU2YDR078C RPS19BP07281 144 aaPredicted RBP3.12□□□□□ -1.91
SHU2YDR078C YCR016WP25617 290 aaKnown RBP3.12□□□□□ -1.91
SHU2YDR078C IMP1P28627 190 aa3.12□□□□□ -1.91
SHU2YDR078C MRPS9P38120 278 aa3.12□□□□□ -1.91
SHU2YDR078C MRP21P38175 177 aa3.12□□□□□ -1.91
SHU2YDR078C YER085CP40058 173 aa3.12□□□□□ -1.91
SHU2YDR078C YIL054WP40524 105 aa3.12□□□□□ -1.91
SHU2YDR078C YJR012CP47087 207 aa3.12□□□□□ -1.91
SHU2YDR078C NBP35P52920 328 aa3.12□□□□□ -1.91
SHU2YDR078C MAL13P53338 473 aa3.12□□□□□ -1.91
SHU2YDR078C YPL113CQ02961 396 aa3.12□□□□□ -1.91
SHU2YDR078C GRX3Q03835 250 aa3.12□□□□□ -1.91
SHU2YDR078C ARC18Q05933 178 aaKnown RBP3.12□□□□□ -1.91
SHU2YDR078C FLO11P08640 1367 aa3.12□□□□□ -1.91
SHU2YDR078C STH1P32597 1359 aa3.12□□□□□ -1.91
SHU2YDR078C CFT1Q06632 1357 aaKnown RBP3.12□□□□□ -1.91
SHU2YDR078C SOD1P00445 154 aaKnown RBP3.11□□□□□ -1.91
SHU2YDR078C CDC42P19073 191 aa3.11□□□□□ -1.91
SHU2YDR078C RPB9P27999 122 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms