RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	YAR066W	P0CX18	203 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	YHR214W	P0CX19	203 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	SAM2	P19358	384 aa	Known RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	ISY1	P21374	235 aa	Predicted RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	YEF1	P32622	495 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	DBP7	P36120	742 aa	Known RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	CBR1	P38626	284 aa	Known RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	GAA1	P39012	614 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	YIL060W	P40519	144 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	CIN5	P40917	295 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	TIS11	P47977	285 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	MGA1	P53050	456 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	NSA1	P53136	463 aa	Predicted RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	HCH1	P53834	153 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	TRM44	Q02648	567 aa	Known RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	YMR034C	Q05131	434 aa	Predicted RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	YDL114W	Q07530	308 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	YAP7	Q08182	245 aa		4.26	□□□□□ -1.73
TRM8	YDL201W	RRP42	Q12277	265 aa	Predicted RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	WTM1	Q12363	437 aa	Known RBP	4.26	□□□□□ -1.73
TRM8	YDL201W	YER145C-A	A0A023PYF4	145 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	RPL31A	P0C2H8	113 aa	Known RBP	4.25	□□□□□ -1.73
TRM8	YDL201W	MTF1	P14908	341 aa	Known RBP	4.25	□□□□□ -1.73
TRM8	YDL201W	RPL16B	P26785	198 aa	Known RBP	4.25	□□□□□ -1.73
TRM8	YDL201W	ECM15	P35195	104 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	HMT1	P38074	348 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	ARN1	P38731	627 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YER184C	P39961	794 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YER121W	P40076	114 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YFL040W	P43562	540 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	CIN2	P46670	268 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YJL016W	P47072	561 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YJR079W	P47126	109 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	ADO1	P47143	340 aa	Known RBP	4.25	□□□□□ -1.73
TRM8	YDL201W	BUL1	P48524	976 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	TOS2	P50078	622 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YNR048W	P53740	393 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	FRE4	P53746	719 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	IBD2	P53892	351 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	VPS60	Q03390	229 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	DDC1	Q08949	612 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	GRE1	Q08969	168 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	YCT1	Q12235	531 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	ARP6	Q12509	438 aa		4.25	□□□□□ -1.73
TRM8	YDL201W	MEX67	Q99257	599 aa	Known RBP	4.25	□□□□□ -1.73
TRM8	YDL201W	URA6	P15700	204 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	PTP1	P25044	335 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YCR041W	P37265	110 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YMC2	P38087	329 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	BMT2	P38278	337 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	GEP4	P38812	185 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YPT35	P38815	214 aa	Known RBP	4.24	□□□□□ -1.73
TRM8	YDL201W	BMT5	P40493	336 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	ICE2	P40499	491 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YIR016W	P40572	265 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YFR057W	P43625	151 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	AIM23	P47015	356 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	PHB2	P50085	310 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	NIF3	P53081	288 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	MRM2	P53123	320 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	MST27	P53176	234 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	MAL13	P53338	473 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	ASI3	P53983	676 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YLR460C	P54007	376 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	CTL1	Q03220	320 aa	Known RBP	4.24	□□□□□ -1.73
TRM8	YDL201W	SLD5	Q03406	294 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YMR114C	Q04471	368 aa	Known RBP	4.24	□□□□□ -1.73
TRM8	YDL201W	ARC18	Q05933	178 aa	Known RBP	4.24	□□□□□ -1.73
TRM8	YDL201W	SUE1	Q06524	206 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	HEM25	Q07534	307 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	YDL218W	Q07629	317 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	ESA1	Q08649	445 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	RSA1	Q08932	381 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	SME1	Q12330	94 aa	Predicted RBP	4.24	□□□□□ -1.73
TRM8	YDL201W	UTP23	Q12339	254 aa	Known RBP	4.24	□□□□□ -1.73
TRM8	YDL201W	EMP46	Q12396	444 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	CSR2	Q12734	1121 aa		4.24	□□□□□ -1.73
TRM8	YDL201W	PUT1	P09368	476 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	AMD1	P15274	810 aa	Known RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	MAK32	P23060	363 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	YCR102C	P25608	368 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	HOM6	P31116	359 aa	Known RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	TPS2	P31688	896 aa	Known RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	KAR9	P32526	644 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	ANR2	P36090	516 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	PHO88	P38264	188 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	DHH1	P39517	506 aa	Known RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	EXO1	P39875	702 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	PAC2	P39937	518 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	YKE4	P40544	346 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	IRC18	P47056	224 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	JHD2	P47156	728 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	VMA10	P48836	114 aa	Known RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	NUP57	P48837	541 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	BRR6	P53062	197 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	CWC25	P53854	179 aa	Known RBP	4.23	□□□□□ -1.73
TRM8	YDL201W	SNX41	Q04053	625 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	YMR027W	Q04371	470 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	MFG1	Q07684	458 aa		4.23	□□□□□ -1.73
TRM8	YDL201W	YLR012C	Q07927	99 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms