RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDS1	YBR029C	EFM1	P38732	585 aa		4.6	□□□□□ -1.67
CDS1	YBR029C	SHQ1	P40486	507 aa	Predicted RBP	4.6	□□□□□ -1.67
CDS1	YBR029C	YGL039W	P53183	348 aa	Known RBP	4.6	□□□□□ -1.67
CDS1	YBR029C	RMI1	Q02685	241 aa		4.6	□□□□□ -1.67
CDS1	YBR029C	RPL21A	Q02753	160 aa	Known RBP	4.6	□□□□□ -1.67
CDS1	YBR029C	YOR376W	Q08900	122 aa		4.6	□□□□□ -1.67
CDS1	YBR029C	GCG1	P32656	232 aa	Known RBP	4.59	□□□□□ -1.67
CDS1	YBR029C	YPC1	P38298	316 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	SCC4	P40090	624 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	PRE5	P40302	234 aa	Known RBP	4.59	□□□□□ -1.67
CDS1	YBR029C	UBC13	P52490	153 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	KAP114	P53067	1004 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	TPC1	P53257	314 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	ADD37	Q03233	198 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	MMT2	Q08970	484 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	BTS1	Q12051	335 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	YOL107W	Q12239	342 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	BI3	Q9ZZW7	517 aa		4.59	□□□□□ -1.67
CDS1	YBR029C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CDS1	YBR029C	RSR1	P13856	272 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	IFM1	P25038	676 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	RCK1	P38622	512 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	SPT8	P38915	602 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	PET8	P38921	284 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	CPD1	P53314	239 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	YLR446W	Q06204	433 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	MHR1	Q06630	226 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	LAG2	Q92325	660 aa		4.58	□□□□□ -1.68
CDS1	YBR029C	GDS1	P41913	522 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	YPS5	P53057	165 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	VEL1	P53058	206 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	HAL1	Q01766	294 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	MRPS16	Q02608	121 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	GMC1	Q04399	608 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	YRF1-2	P40105	1681 aa		4.57	□□□□□ -1.68
CDS1	YBR029C	TFS1	P14306	219 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	EPT1	P22140	391 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	TAE1	P38340	232 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	GGC1	P38988	300 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	YGL262W	P53054	175 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	SDS23	P53172	527 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	MCH1	Q07376	486 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	VIK1	Q12045	647 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	RAD9	P14737	1309 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	KRE5	P22023	1365 aa		4.56	□□□□□ -1.68
CDS1	YBR029C	REV1	P12689	985 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	PCL1	P24867	279 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	SPS19	P32573	292 aa	Known RBP	4.55	□□□□□ -1.68
CDS1	YBR029C	YJL118W	P47022	219 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	YNR066C	P53752	436 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	YLR152C	P54072	576 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	MED4	Q12343	284 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	PSK1	P31374	1356 aa		4.55	□□□□□ -1.68
CDS1	YBR029C	CFT1	Q06632	1357 aa	Known RBP	4.55	□□□□□ -1.68
CDS1	YBR029C	MET16	P18408	261 aa	Predicted RBP	4.54	□□□□□ -1.68
CDS1	YBR029C	LDB16	P25587	256 aa		4.54	□□□□□ -1.68
CDS1	YBR029C	IMP3	P32899	183 aa	Predicted RBP	4.54	□□□□□ -1.68
CDS1	YBR029C	YKL187C	P34231	750 aa		4.54	□□□□□ -1.68
CDS1	YBR029C	COY1	P34237	679 aa		4.54	□□□□□ -1.68
CDS1	YBR029C	ALD5	P40047	520 aa	Known RBP	4.54	□□□□□ -1.68
CDS1	YBR029C	NUP84	P52891	726 aa		4.54	□□□□□ -1.68
CDS1	YBR029C	SHE10	P53075	577 aa		4.54	□□□□□ -1.68
CDS1	YBR029C	TPS1	Q00764	495 aa	Known RBP	4.54	□□□□□ -1.68
CDS1	YBR029C	YLR173W	Q06247	608 aa		4.54	□□□□□ -1.68
CDS1	YBR029C	SPT4	P32914	102 aa	Predicted RBP	4.53	□□□□□ -1.68
CDS1	YBR029C	RPT5	P33297	434 aa	Known RBP	4.53	□□□□□ -1.68
CDS1	YBR029C	LSB1	P53281	241 aa		4.53	□□□□□ -1.68
CDS1	YBR029C	YMR209C	Q03648	457 aa		4.53	□□□□□ -1.68
CDS1	YBR029C	INP2	Q03824	705 aa		4.53	□□□□□ -1.68
CDS1	YBR029C	API2	Q04413	109 aa		4.53	□□□□□ -1.68
CDS1	YBR029C	COX20	Q04935	205 aa		4.53	□□□□□ -1.68
CDS1	YBR029C	MIM1	Q08176	113 aa		4.53	□□□□□ -1.68
CDS1	YBR029C	RPP0	P05317	312 aa	Known RBP	4.53	□□□□□ -1.69
CDS1	YBR029C	MRP1	P10662	321 aa	Known RBP	4.53	□□□□□ -1.69
CDS1	YBR029C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.69	not detected
CDS1	YBR029C	LIA1	P47120	325 aa	Known RBP	4.53	□□□□□ -1.69
CDS1	YBR029C	YPT32	P51996	222 aa	Known RBP	4.53	□□□□□ -1.69
CDS1	YBR029C	FMP48	P53233	369 aa		4.53	□□□□□ -1.69
CDS1	YBR029C	PEX30	Q06169	523 aa		4.53	□□□□□ -1.69
CDS1	YBR029C	TAZ1	Q06510	381 aa		4.53	□□□□□ -1.69
CDS1	YBR029C	HIS1	P00498	297 aa	Known RBP	4.52	□□□□□ -1.69
CDS1	YBR029C	POL30	P15873	258 aa	Known RBP	4.52	□□□□□ -1.69
CDS1	YBR029C	UTH1	P36135	365 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	MRPL27	P36526	146 aa	Predicted RBP	4.52	□□□□□ -1.69
CDS1	YBR029C	SMP1	P38128	452 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	RFT1	P38206	574 aa	Predicted RBP	4.52	□□□□□ -1.69
CDS1	YBR029C	ECM34	P38728	170 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	PRM9	P39551	298 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	TAD2	P47058	250 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	TIS11	P47977	285 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	YOR292C	Q08743	309 aa		4.52	□□□□□ -1.69
CDS1	YBR029C	COX2	P00410	251 aa		4.51	□□□□□ -1.69
CDS1	YBR029C	DAL82	P21705	255 aa		4.51	□□□□□ -1.69
CDS1	YBR029C	CDC13	P32797	924 aa	Known RBP	4.51	□□□□□ -1.69
CDS1	YBR029C	CYM1	P32898	989 aa		4.51	□□□□□ -1.69
CDS1	YBR029C	CSE1	P33307	960 aa		4.51	□□□□□ -1.69
CDS1	YBR029C	AGX1	P43567	385 aa		4.51	□□□□□ -1.69
CDS1	YBR029C	ALG11	P53954	548 aa	Known RBP	4.51	□□□□□ -1.69
CDS1	YBR029C	INP1	Q03694	420 aa		4.51	□□□□□ -1.69
CDS1	YBR029C	VHS1	Q03785	461 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms