RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W PDA1P16387 420 aaKnown RBP4.42□□□□□ -1.7
PRE7YBL041W RPA135P22138 1203 aaKnown RBP4.42□□□□□ -1.7
PRE7YBL041W PRP28P23394 588 aa4.42□□□□□ -1.7
PRE7YBL041W YCR100CP25606 316 aa4.42□□□□□ -1.7
PRE7YBL041W FEN2P25621 512 aaKnown RBP4.42□□□□□ -1.7
PRE7YBL041W NTG1P31378 399 aa4.42□□□□□ -1.7
PRE7YBL041W THI4P32318 326 aa4.42□□□□□ -1.7
PRE7YBL041W MCM10P32354 571 aa4.42□□□□□ -1.7
PRE7YBL041W ARC19P33204 171 aaKnown RBP4.42□□□□□ -1.7
PRE7YBL041W SOF1P33750 489 aaKnown RBP4.42□□□□□ -1.7
PRE7YBL041W MRPS5P33759 307 aa4.42□□□□□ -1.7
PRE7YBL041W NIC96P34077 839 aa4.42□□□□□ -1.7
PRE7YBL041W RSM22P36056 628 aa4.42□□□□□ -1.7
PRE7YBL041W GDT1P38301 280 aaPredicted RBP4.42□□□□□ -1.7
PRE7YBL041W ARN2P38724 620 aa4.42□□□□□ -1.7
PRE7YBL041W FET3P38993 636 aa4.42□□□□□ -1.7
PRE7YBL041W NAB3P38996 802 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
PRE7YBL041W CAK1P43568 368 aaPredicted RBP4.42□□□□□ -1.7
PRE7YBL041W IDS2P46958 469 aa4.42□□□□□ -1.7
PRE7YBL041W MDE1P47095 244 aa4.42□□□□□ -1.7
PRE7YBL041W ADO1P47143 340 aaKnown RBP4.42□□□□□ -1.7
PRE7YBL041W YGR168CP53293 376 aa4.42□□□□□ -1.7
PRE7YBL041W ACS1Q01574 713 aa4.42□□□□□ -1.7
PRE7YBL041W SNT309Q06091 175 aaPredicted RBP4.42□□□□□ -1.7
PRE7YBL041W RSA1Q08932 381 aa4.42□□□□□ -1.7
PRE7YBL041W YOL159C-AQ3E769 90 aa4.42□□□□□ -1.7
PRE7YBL041W EXG1P23776 448 aaKnown RBP4.41□□□□□ -1.7
PRE7YBL041W ITR1P30605 584 aa4.41□□□□□ -1.7
PRE7YBL041W DPH5P32469 300 aaPredicted RBP4.41□□□□□ -1.7
PRE7YBL041W MSS1P32559 526 aaPredicted RBP4.41□□□□□ -1.7
PRE7YBL041W PPG1P32838 368 aa4.41□□□□□ -1.7
PRE7YBL041W GAT2P40209 560 aa4.41□□□□□ -1.7
PRE7YBL041W MAL12P53341 584 aa4.41□□□□□ -1.7
PRE7YBL041W RPL6AQ02326 176 aaKnown RBP4.41□□□□□ -1.7
PRE7YBL041W DML1Q03652 475 aa4.41□□□□□ -1.7
PRE7YBL041W RVB1Q03940 463 aaKnown RBP4.41□□□□□ -1.7
PRE7YBL041W SWA2Q06677 668 aa4.41□□□□□ -1.7
PRE7YBL041W PML1Q07930 204 aaPredicted RBP4.41□□□□□ -1.7
PRE7YBL041W NFI1Q12216 726 aa4.41□□□□□ -1.7
PRE7YBL041W YHR214C-EQ8TGK0 99 aa4.41□□□□□ -1.7
PRE7YBL041W SEC12P11655 471 aa4.4□□□□□ -1.71
PRE7YBL041W PMR1P13586 950 aa4.4□□□□□ -1.71
PRE7YBL041W DPM1P14020 267 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W SPO7P18410 259 aa4.4□□□□□ -1.71
PRE7YBL041W RRP7P25368 297 aaPredicted RBP4.4□□□□□ -1.71
PRE7YBL041W CAM1P29547 415 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W PDB1P32473 366 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W PAD1P33751 242 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
PRE7YBL041W SPC34P36131 295 aa4.4□□□□□ -1.71
PRE7YBL041W SWD1P39706 426 aa4.4□□□□□ -1.71
PRE7YBL041W LSM4P40070 187 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W DIM1P41819 318 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W MOB2P43563 287 aa4.4□□□□□ -1.71
PRE7YBL041W IRC7P43623 340 aa4.4□□□□□ -1.71
PRE7YBL041W TAX4P47030 604 aa4.4□□□□□ -1.71
PRE7YBL041W TIM10P87108 93 aa4.4□□□□□ -1.71
PRE7YBL041W RCE1Q03530 315 aa4.4□□□□□ -1.71
PRE7YBL041W SNO4Q04902 237 aa4.4□□□□□ -1.71
PRE7YBL041W HSP33Q08914 237 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W HSP32Q08992 237 aa4.4□□□□□ -1.71
PRE7YBL041W RTC5Q12108 567 aaKnown RBP4.4□□□□□ -1.71
PRE7YBL041W RKI1Q12189 258 aa4.4□□□□□ -1.71
PRE7YBL041W HMS1Q12398 434 aa4.4□□□□□ -1.71
PRE7YBL041W Q0297Q9ZZV8 51 aa4.4□□□□□ -1.71
PRE7YBL041W RPL35AP0CX84 120 aaKnown RBP4.39□□□□□ -1.71
PRE7YBL041W RPL35BP0CX85 120 aaKnown RBP4.39□□□□□ -1.71
PRE7YBL041W CNA1P23287 553 aa4.39□□□□□ -1.71
PRE7YBL041W PRE2P30656 287 aaKnown RBP4.39□□□□□ -1.71
PRE7YBL041W DBF20P32328 564 aa4.39□□□□□ -1.71
PRE7YBL041W APE2P32454 952 aaKnown RBP4.39□□□□□ -1.71
PRE7YBL041W YKL187CP34231 750 aa4.39□□□□□ -1.71
PRE7YBL041W PDX3P38075 228 aaKnown RBP4.39□□□□□ -1.71
PRE7YBL041W YBR220CP38318 560 aa4.39□□□□□ -1.71
PRE7YBL041W MLH1P38920 769 aa4.39□□□□□ -1.71
PRE7YBL041W YER184CP39961 794 aa4.39□□□□□ -1.71
PRE7YBL041W YER084WP40057 128 aa4.39□□□□□ -1.71
PRE7YBL041W YIL077CP40508 320 aa4.39□□□□□ -1.71
PRE7YBL041W PMT6P42934 759 aa4.39□□□□□ -1.71
PRE7YBL041W SIP18P50263 79 aa4.39□□□□□ -1.71
PRE7YBL041W RMR1P53060 241 aa4.39□□□□□ -1.71
PRE7YBL041W BRR6P53062 197 aa4.39□□□□□ -1.71
PRE7YBL041W YGL101WP53144 215 aa4.39□□□□□ -1.71
PRE7YBL041W MRP51Q02950 344 aa4.39□□□□□ -1.71
PRE7YBL041W NDL1Q06568 189 aa4.39□□□□□ -1.71
PRE7YBL041W HRT1Q08273 121 aa4.39□□□□□ -1.71
PRE7YBL041W MED2Q12124 431 aa4.39□□□□□ -1.71
PRE7YBL041W SIA1Q12212 622 aa4.39□□□□□ -1.71
PRE7YBL041W SPO24Q3E752 67 aa4.39□□□□□ -1.71
PRE7YBL041W URE2P23202 354 aaKnown RBP4.38□□□□□ -1.71
PRE7YBL041W CLB2P24869 491 aa4.38□□□□□ -1.71
PRE7YBL041W GIT1P25346 518 aa4.38□□□□□ -1.71
PRE7YBL041W MDH3P32419 343 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
PRE7YBL041W SSZ1P38788 538 aaKnown RBP4.38□□□□□ -1.71
PRE7YBL041W ISC1P40015 477 aaKnown RBP4.38□□□□□ -1.71
PRE7YBL041W SPO73P40031 143 aa4.38□□□□□ -1.71
PRE7YBL041W PRE6P40303 254 aaKnown RBP4.38□□□□□ -1.71
PRE7YBL041W NAS2P40555 220 aa4.38□□□□□ -1.71
PRE7YBL041W GDS1P41913 522 aa4.38□□□□□ -1.71
PRE7YBL041W STB1P42845 420 aa4.38□□□□□ -1.71
PRE7YBL041W DPB11P47027 764 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 103.2 ms