RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	BIR1	P47134	954 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	PAC10	P48363	199 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SDT1	P53078	280 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	VPS73	P53142	486 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	ERG26	P53199	349 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	YGR079W	P53249	370 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	MRPL50	P53724	139 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SWC3	YAL011W	IZH1	Q03419	316 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	MAK3	Q03503	176 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SSY1	Q03770	852 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	TRM82	Q03774	444 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	CTK1	Q03957	528 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	KRE28	Q04431	385 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	NEJ1	Q06148	342 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SYO1	Q07395	620 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	VPS68	Q12016	184 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	YOR029W	Q12243	111 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	PRP46	Q12417	451 aa	Predicted RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	MRX4	Q12467	430 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	HRP1	Q99383	534 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	SCEI	P03882	235 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SIR3	P06701	978 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SPT15	P13393	240 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	FPS1	P23900	669 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	ARO7	P32178	256 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	MKK1	P32490	508 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	REC114	P32841	428 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	RRN10	P38204	145 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SDH8	P38345	138 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	ISC1	P40015	477 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	GET2	P40056	285 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	LYS12	P40495	371 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	AGE2	P40529	298 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	PRM10	P42946	383 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	CWC23	P52868	283 aa	Predicted RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	SNO2	P53823	222 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	YMR265C	Q03508	461 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	THP3	Q12049	470 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	SFM1	Q12314	213 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	YPR064W	Q12492	139 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SPO24	Q3E752	67 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	RPS14A	P06367	137 aa	Known RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	GDH1	P07262	454 aa	Known RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	STE18	P18852	110 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	GPI12	P23797	304 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	SCO2	P38072	301 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	RTC2	P38279	296 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	RPS14B	P39516	138 aa	Known RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	CEM1	P39525	442 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	ELO1	P39540	310 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	RRG9	P40156	214 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	PAC11	P40960	533 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	IBA57	P47158	497 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	HMS2	P47175	358 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	IMD3	P50095	523 aa	Known RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	NQM1	P53228	333 aa	Predicted RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	FHN1	P53279	174 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	RRN9	P53437	365 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	TPS1	Q00764	495 aa	Known RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	RIM13	Q03792	727 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	YFT2	Q06676	274 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	PLB3	Q08108	686 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	PEX27	Q08580	376 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	SAM4	Q08985	325 aa	Known RBP	4.19	□□□□□ -1.74
SWC3	YAL011W	PNS1	Q12412	539 aa		4.19	□□□□□ -1.74
SWC3	YAL011W	ADH2	P00331	348 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	NFT1	P0CE68	1218 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	ZWF1	P11412	505 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	IDP1	P21954	428 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	NAR1	P23503	491 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	GIT1	P25346	518 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	BUD23	P25627	275 aa	Predicted RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	YKL097C	P34245	136 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	BIG1	P38813	335 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	PHM8	P40025	321 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	DDI1	P40087	428 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	VRG4	P40107	337 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	ATG27	P46989	271 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	TAX4	P47030	604 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	JHD2	P47156	728 aa	Predicted RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	MSY1	P48527	492 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	YGR168C	P53293	376 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	CTF19	Q02732	369 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	MDM30	Q05930	598 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	ARO10	Q06408	635 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	PFA4	Q12006	378 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	YDL176W	Q12027	708 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	YRA1	Q12159	226 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	SIA1	Q12212	622 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	YOR114W	Q12219	294 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	AAC1	P04710	309 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	MET2	P08465	486 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	RPS16A	P0CX51	143 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	RPS16B	P0CX52	143 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	FEN2	P25621	512 aa	Known RBP	4.18	□□□□□ -1.74
SWC3	YAL011W	OAC1	P32332	324 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SWC3	YAL011W	RPC34	P32910	317 aa		4.18	□□□□□ -1.74
SWC3	YAL011W	GPX2	P38143	162 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 96 ms