RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	DOCK6	Q96HP0	2047 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	COL4A3	Q01955	1670 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	EML1	O00423	815 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	NRP1	O14786	923 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	STX6	O43752	255 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZNF623	O75123	536 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	MAF	O75444	373 aa	Predicted RBP	11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	RFPL2	O75678	378 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	SYT1	P21579	422 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	DNM2	P50570	870 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	RAB27A	P51159	221 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	USP11	P51784	963 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	NLRP5	P59047	1200 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	FOXK2	Q01167	660 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	UBXN11	Q5T124	520 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	PPFIBP1	Q86W92	1011 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	CCDC148	Q8NFR7	591 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	ETNPPL	Q8TBG4	499 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	URGCP	Q8TCY9	931 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	BICD2	Q8TD16	824 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	RIN2	Q8WYP3	895 aa	Predicted RBP	11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	MYADM	Q96S97	322 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	EMILIN2	Q9BXX0	1053 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	RSAD1	Q9HA92	442 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	CA14	Q9ULX7	337 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	ARID2	Q68CP9	1835 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	EP300	Q09472	2414 aa	Predicted RBP	11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	WDR87	Q6ZQQ6	2873 aa		11.18	□□□□□ -0.62
PHGDH-222	ENST00000641587	STK25	O00506	426 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	INPPL1	O15357	1258 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	TEX28	O15482	410 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	SLC37A4	O43826	429 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	UROD	P06132	367 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	SPATA31D3	P0C874	917 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	SKI	P12755	728 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	HOXA11	P31270	313 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	GBP2	P32456	591 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	NUCB2	P80303	420 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	GNL2	Q13823	731 aa	Known RBP	11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587		Q4G0T1	1027 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	MCTP1	Q6DN14	999 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	POTEG	Q6S5H5	508 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	C15orf39	Q6ZRI6	1047 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	SPATA31D4	Q6ZUB0	917 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	RDM1	Q8NG50	284 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	TMEM143	Q96AN5	459 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	B3GALT6	Q96L58	329 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	RTP3	Q9BQQ7	232 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	HERC2P3	Q9BVR0	1158 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	INO80B	Q9C086	356 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	MRPL17	Q9NRX2	175 aa	Known RBP	11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	FAN1	Q9Y2M0	1017 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	COL4A3BP	Q9Y5P4	624 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587		R4GN57	208 aa		11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	TDRD15	B5MCY1	1934 aa	Known RBP	11.17	□□□□□ -0.62
PHGDH-222	ENST00000641587	CLUH	O75153	1309 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	CCDC195	A0A1B0GUA6	201 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	SOD2	P04179	222 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	DCN	P07585	359 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	SRGAP2C	P0DJJ0	459 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	DDIT3	P35638	169 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	OR1G1	P47890	313 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	CDC42EP1	Q00587	391 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	PKP1	Q13835	747 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	SAFB	Q15424	915 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	NPY5R	Q15761	445 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	SPECC1	Q5M775	1068 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	ERMP1	Q7Z2K6	904 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	MRPL10	Q7Z7H8	261 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	GLYCTK	Q8IVS8	523 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	SMG8	Q8ND04	991 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	RSPH1	Q8WYR4	309 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZNF707	Q96C28	371 aa	Predicted RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	RMDN1	Q96DB5	314 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	PGBD4	Q96DM1	585 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	MBOAT7	Q96N66	472 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	FAM193B	Q96PV7	902 aa	Predicted RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	RPS6KC1	Q96S38	1066 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	EIF2A	Q9BY44	585 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	RNF39	Q9H2S5	420 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	WDR6	Q9NNW5	1121 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	GJB4	Q9NTQ9	266 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	CACNG4	Q9UBN1	327 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	PCDHA4	Q9UN74	947 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	HES2	Q9Y543	173 aa		11.16	□□□□□ -0.62
PHGDH-222	ENST00000641587	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	MED19	A0JLT2	244 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587		M0R2N6	131 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	GLUD1	P00367	558 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	ALDH2	P05091	517 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZSCAN22	P10073	491 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	PDIA4	P13667	645 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	CYP3A7	P24462	503 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	MLH1	P40692	756 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	SCNN1G	P51170	649 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	PSMC5	P62195	406 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	INF2	Q27J81	1249 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	GET4	Q7L5D6	327 aa	Predicted RBP	11.15	□□□□□ -0.62

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