RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 KNG1P01042 644 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 LTA4HP09960 611 aaKnown RBP9.18□□□□□ -0.94
NUP54-215ENST00000514313 GAAP10253 952 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 COL6A1P12109 1028 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 IGFBP6P24592 240 aaPredicted RBP9.18□□□□□ -0.94
NUP54-215ENST00000514313 SLC6A9P48067 706 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 STAT5BP51692 787 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 NOGQ13253 232 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 THEMIS2Q5TEJ8 643 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 ERAP2Q6P179 960 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 FAM180AQ6UWF9 173 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 RPTORQ8N122 1335 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 KRT78Q8N1N4 520 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 ARMT1Q9H993 441 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 FBXO10Q9UK96 956 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 SIK3Q9Y2K2 1263 aa9.18□□□□□ -0.94
NUP54-215ENST00000514313 A0A088AWK7 358 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 CFAP69A5D8W1 941 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 H0Y858 1186 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 ENDOD1O94919 500 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 FSBPO95073 299 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 RPLP2P05387 115 aaKnown RBP9.17□□□□□ -0.94
NUP54-215ENST00000514313 ZKSCAN1P17029 563 aaPredicted RBP9.17□□□□□ -0.94
NUP54-215ENST00000514313 ECHS1P30084 290 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 HK3P52790 923 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 CDC42EP1Q00587 391 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 TARDBPQ13148 414 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP54-215ENST00000514313 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 MST1LQ2TV78 715 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 ZMYM1Q5SVZ6 1142 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 APOA5Q6Q788 366 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 Q6ZVL8 140 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 SKAP1Q86WV1 359 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 UNC5BQ8IZJ1 945 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 KYQ8NBH2 561 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 PGBD4Q96DM1 585 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 SAMD11Q96NU1 681 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 C22orf23Q9BZE7 217 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 STAP2Q9UGK3 403 aa9.17□□□□□ -0.94
NUP54-215ENST00000514313 MGEA5O60502 916 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 PAPLNO95428 1278 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 TRAPPC10P48553 1259 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 IFIT5Q13325 482 aaKnown RBP9.16□□□□□ -0.94
NUP54-215ENST00000514313 POLD3Q15054 466 aaPredicted RBP9.16□□□□□ -0.94
NUP54-215ENST00000514313 C1orf228Q6PIY5 440 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 MPZL3Q6UWV2 235 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 IGDCC3Q8IVU1 814 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 ENAHQ8N8S7 591 aaPredicted RBP9.16□□□□□ -0.94
NUP54-215ENST00000514313 SNX33Q8WV41 574 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 LIN37Q96GY3 246 aaPredicted RBP9.16□□□□□ -0.94
NUP54-215ENST00000514313 CLPTM1LQ96KA5 538 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 DMRTA2Q96SC8 542 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 ZMAT3Q9HA38 289 aaKnown RBP9.16□□□□□ -0.94
NUP54-215ENST00000514313 PPCSQ9HAB8 311 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 ATP6V0A4Q9HBG4 840 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 TDP1Q9NUW8 608 aa9.16□□□□□ -0.94
NUP54-215ENST00000514313 ABHD14A-ACY1A0A1B0GW23 586 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 ZNF503-AS2A6NEH8 195 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 TCEA3O75764 348 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 KCNQ1P51787 676 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 EPHB3P54753 998 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 NKX6-1P78426 367 aaPredicted RBP9.15□□□□□ -0.94
NUP54-215ENST00000514313 GPSM2P81274 684 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 STK3Q13188 491 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 SMAD4Q13485 552 aaKnown RBP9.15□□□□□ -0.94
NUP54-215ENST00000514313 UBE3CQ15386 1083 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 GJC2Q5T442 439 aaPredicted RBP9.15□□□□□ -0.94
NUP54-215ENST00000514313 MSL3Q8N5Y2 521 aaKnown RBP9.15□□□□□ -0.94
NUP54-215ENST00000514313 LINC00482Q8N8I6 264 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 C3orf20Q8ND61 904 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 MZB1Q8WU39 189 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 ZCCHC14Q8WYQ9 949 aaKnown RBP9.15□□□□□ -0.94
NUP54-215ENST00000514313 MRGPRX4Q96LA9 322 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 SGCZQ96LD1 299 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 CCDC138Q96M89 665 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 DIRC2Q96SL1 478 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 MCOLN1Q9GZU1 580 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 NUP62CLQ9H1M0 184 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 LMBRD1Q9NUN5 540 aa9.15□□□□□ -0.94
NUP54-215ENST00000514313 OAS3Q9Y6K5 1087 aaKnown RBP9.15□□□□□ -0.94
NUP54-215ENST00000514313 RASA4BC9J798 803 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 BIN1O00499 593 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 RASA4O43374 803 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 PEX10O60683 326 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 ADAM23O75077 832 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 PHF2O75151 1096 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 CHGBP05060 677 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 SETSIPP0DME0 302 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 SYN1P17600 705 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 PIK3CBP42338 1070 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 LIMS1P48059 325 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 PRIM2P49643 509 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 MLLT6P55198 1093 aaPredicted RBP9.14□□□□□ -0.95
NUP54-215ENST00000514313 FOXO4P98177 505 aa9.14□□□□□ -0.95
NUP54-215ENST00000514313 CHAF1AQ13111 956 aaPredicted RBP9.14□□□□□ -0.95
NUP54-215ENST00000514313 EIF4HQ15056 248 aaKnown RBP9.14□□□□□ -0.95
NUP54-215ENST00000514313 ZRSR2Q15696 482 aaKnown RBP9.14□□□□□ -0.95
NUP54-215ENST00000514313 TRMT10BQ6PF06 316 aaKnown RBP9.14□□□□□ -0.95
NUP54-215ENST00000514313 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms