RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 AMHP03971 560 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 HOXD13P35453 343 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 NCBP1Q09161 790 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 KCNA1Q09470 495 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 STRN3Q13033 797 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 STK4Q13043 487 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 PSMD2Q13200 908 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 EEF1DP3Q658K8 133 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 TWF2Q6IBS0 349 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 SLC39A4Q6P5W5 647 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 SLC27A1Q6PCB7 646 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 MRPL10Q7Z7H8 261 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 ECHDC2Q86YB7 292 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 NPAS4Q8IUM7 802 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 TARS2Q9BW92 718 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 EIF2AQ9BY44 585 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 CLSTN2Q9H4D0 955 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 FAM105AQ9NUU6 356 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 EXOC1Q9NV70 894 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 HOOK1Q9UJC3 728 aaKnown RBP16.22■□□□□ 0.19
CPNE1-215ENST00000437100 PCDHB13Q9Y5F0 798 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 TTC3P53804 2025 aa16.22■□□□□ 0.19
CPNE1-215ENST00000437100 COL4A6Q14031 1691 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 ATP2A2P16615 1042 aaKnown RBP16.21■□□□□ 0.19
CPNE1-215ENST00000437100 KCNJ6P48051 423 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 RAB27AP51159 221 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 FAM109BQ6ICB4 259 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-215ENST00000437100 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 ZNF507Q8TCN5 953 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 SCFD1Q8WVM8 642 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-215ENST00000437100 GSDMAQ96QA5 445 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 TMEM161AQ9NX61 479 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 PCDHB2Q9Y5E7 798 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 STYXL1Q9Y6J8 313 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 ZMYM2Q9UBW7 1377 aa16.21■□□□□ 0.19
CPNE1-215ENST00000437100 TRIOBPQ9H2D6 2365 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 PTPRSQ13332 1948 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 TOM1L1O75674 476 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 SMC2O95347 1197 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 GJB5O95377 273 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 MBD3O95983 291 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 SKIP12755 728 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 HTRA4P83105 476 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-215ENST00000437100 MCL1Q07820 350 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 MPZL3Q6UWV2 235 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 TMCO2Q7Z6W1 182 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-215ENST00000437100 CDR2LQ86X02 465 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-215ENST00000437100 MYOCDQ8IZQ8 938 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 SMG8Q8ND04 991 aaKnown RBP16.2■□□□□ 0.18
CPNE1-215ENST00000437100 ACCSQ96QU6 501 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 HAPLN2Q9GZV7 340 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 CDT1Q9H211 546 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 IKZF4Q9H2S9 585 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
CPNE1-215ENST00000437100 HNRNPDLO14979 420 aaKnown RBP16.19■□□□□ 0.18
CPNE1-215ENST00000437100 FAM189A1O60320 539 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 PRPF6O94906 941 aaKnown RBP16.19■□□□□ 0.18
CPNE1-215ENST00000437100 EOMESO95936 686 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 DCAF4L1Q3SXM0 396 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 COBLL1Q53SF7 1204 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 STXBP4Q6ZWJ1 553 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 SMARCE1Q969G3 411 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 ZNF689Q96CS4 500 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-215ENST00000437100 ZBTB45Q96K62 511 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-215ENST00000437100 TMEM206Q9H813 350 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 RMND1Q9NWS8 449 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 MAN1B1Q9UKM7 699 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 IPPQ9Y573 584 aa16.19■□□□□ 0.18
CPNE1-215ENST00000437100 TISP43B9A030 160 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 ANKRD63C9JTQ0 380 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 INPPL1O15357 1258 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 DGKIO75912 1065 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 NPTXRO95502 500 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 STAG3L1P0CL83 205 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 MCF2P10911 925 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 ADSSP30520 456 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 ZNF568Q3ZCX4 644 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 AGMOQ6ZNB7 445 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-215ENST00000437100 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
CPNE1-215ENST00000437100 ADPGKQ9BRR6 497 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 NUP62CLQ9H1M0 184 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 NXF3Q9H4D5 531 aaKnown RBP16.18■□□□□ 0.18
CPNE1-215ENST00000437100 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-215ENST00000437100 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
CPNE1-215ENST00000437100 A0A0B4J269 797 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-215ENST00000437100 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-215ENST00000437100 MEIS3P2A8K0S8 358 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 GRXCR1A8MXD5 290 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 TGFB1I1O43294 461 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 BMP6P22004 513 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 LIG4P49917 911 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms