RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CSRNP2Q9H175 543 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 NXF3Q9H4D5 531 aaKnown RBP19■□□□□ 0.63
CPSF4-203ENST00000430038 DOCK6Q96HP0 2047 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 ARL5CA6NH57 179 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 INPPL1O15357 1258 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 ERLIN2O94905 339 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 SSBP05455 408 aaKnown RBP eCLIP18.99■□□□□ 0.63
CPSF4-203ENST00000430038 XRCC6P12956 609 aaKnown RBP eCLIP18.99■□□□□ 0.63
CPSF4-203ENST00000430038 ITGA4P13612 1032 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 HOXB8P17481 243 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-203ENST00000430038 MLH1P40692 756 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 TOB1P50616 345 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-203ENST00000430038 TRIM67Q6ZTA4 783 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 RABGGTAQ92696 567 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 CASP10Q92851 521 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 KLHL5Q96PQ7 755 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 LLPHQ9BRT6 129 aaKnown RBP18.99■□□□□ 0.63
CPSF4-203ENST00000430038 ADAM7Q9H2U9 754 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 CACNG4Q9UBN1 327 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 FAN1Q9Y2M0 1017 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 DENND4AQ7Z401 1863 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 CNTNAP2Q9UHC6 1331 aa18.99■□□□□ 0.63
CPSF4-203ENST00000430038 FSD2A1L4K1 749 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 ALDH2P05091 517 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 CNPP09543 421 aaKnown RBP18.98■□□□□ 0.63
CPSF4-203ENST00000430038 AKAP5P24588 427 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 AXLP30530 894 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 SCNN1GP51170 649 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 DSC1Q08554 894 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 RARS2Q5T160 578 aaKnown RBP18.98■□□□□ 0.63
CPSF4-203ENST00000430038 NOTUMQ6P988 496 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 URGCPQ8TCY9 931 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 RSPH1Q8WYR4 309 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 POLR3CQ9BUI4 534 aaPredicted RBP18.98■□□□□ 0.63
CPSF4-203ENST00000430038 APOL6Q9BWW8 343 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 NFKBIZQ9BYH8 718 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 FOXP1Q9H334 677 aaPredicted RBP18.98■□□□□ 0.63
CPSF4-203ENST00000430038 TUFT1Q9NNX1 390 aa18.98■□□□□ 0.63
CPSF4-203ENST00000430038 MTCL1Q9Y4B5 1905 aaKnown RBP18.98■□□□□ 0.63
CPSF4-203ENST00000430038 KMT2EQ8IZD2 1858 aa18.97■□□□□ 0.63
CPSF4-203ENST00000430038 A0A1B0GUA9 196 aa18.97■□□□□ 0.63
CPSF4-203ENST00000430038 TFDP1Q14186 410 aa18.97■□□□□ 0.63
CPSF4-203ENST00000430038 RNF168Q8IYW5 571 aaPredicted RBP18.97■□□□□ 0.63
CPSF4-203ENST00000430038 TMEM175Q9BSA9 504 aa18.97■□□□□ 0.63
CPSF4-203ENST00000430038 SMOC2Q9H3U7 446 aa18.97■□□□□ 0.63
CPSF4-203ENST00000430038 KLK14Q9P0G3 267 aa18.97■□□□□ 0.63
CPSF4-203ENST00000430038 DBR1Q9UK59 544 aaKnown RBP18.97■□□□□ 0.63
CPSF4-203ENST00000430038 PRG3Q9Y2Y8 225 aaPredicted RBP18.97■□□□□ 0.63
CPSF4-203ENST00000430038 TMEM221A6NGB7 291 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 C2CD4DB7Z1M9 353 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 M0R296 226 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 NPTXRO95502 500 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 OR52Z1P0C646 297 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 RPA1P27694 616 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-203ENST00000430038 CLCN4P51793 760 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 SAFBQ15424 915 aaKnown RBP eCLIP18.96■□□□□ 0.63
CPSF4-203ENST00000430038 IL17AQ16552 155 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 TTC38Q5R3I4 469 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 IER5LQ5T953 404 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 ASIC4Q96FT7 647 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 B3GALT6Q96L58 329 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 FBXL18Q96ME1 805 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 FZD8Q9H461 694 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 KANSL3Q9P2N6 904 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 PCDHB6Q9Y5E3 794 aa18.96■□□□□ 0.63
CPSF4-203ENST00000430038 LRRIQ4A6NIV6 560 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 C2CD2LO14523 706 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
CPSF4-203ENST00000430038 SRGAP2BP0DMP2 458 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 U2AF2P26368 475 aaKnown RBP eCLIP18.95■□□□□ 0.62
CPSF4-203ENST00000430038 OR1G1P47890 313 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 PCBP1Q15365 356 aaKnown RBP eCLIP18.95■□□□□ 0.62
CPSF4-203ENST00000430038 TPRNQ4KMQ1 711 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 CDCA2Q69YH5 1023 aaPredicted RBP18.95■□□□□ 0.62
CPSF4-203ENST00000430038 TMC5Q6UXY8 1006 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 CNNM3Q8NE01 707 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 ZSCAN31Q96LW9 406 aaPredicted RBP18.95■□□□□ 0.62
CPSF4-203ENST00000430038 NACC1Q96RE7 527 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 PAAF1Q9BRP4 392 aa18.95■□□□□ 0.62
CPSF4-203ENST00000430038 SOD2P04179 222 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 MYBP10242 640 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 CYP11B2P19099 503 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 IGFBP6P24592 240 aaPredicted RBP18.94■□□□□ 0.62
CPSF4-203ENST00000430038 ITIH3Q06033 890 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 PTPN21Q16825 1174 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 KIAA0319Q5VV43 1072 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 SLC27A1Q6PCB7 646 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 PADI6Q6TGC4 694 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 BMP8AQ7Z5Y6 402 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 CCDC51Q96ER9 411 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 FAM193BQ96PV7 902 aaPredicted RBP18.94■□□□□ 0.62
CPSF4-203ENST00000430038 GPR62Q9BZJ7 368 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 CCDC113Q9H0I3 377 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 UBN1Q9NPG3 1134 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 TSHZ2Q9NRE2 1034 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 GIT1Q9Y2X7 761 aa18.94■□□□□ 0.62
CPSF4-203ENST00000430038 VWA8A3KMH1 1905 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms