RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 UBA6A0AVT1 1052 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 NCLNQ969V3 563 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 CLTCQ00610 1675 aaKnown RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 KRT7P08729 469 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 SMARCA1P28370 1054 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 CC2D1AQ6P1N0 951 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 H3BRJ5 948 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 NCK2O43639 380 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TRPA1O75762 1119 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 NOP14P78316 857 aaKnown RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TEX13BQ9BXU2 312 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TXLNGQ9NUQ3 528 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 NDFIP2Q9NV92 336 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 SUN2Q9UH99 717 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 ARHGEF40Q8TER5 1519 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 GPS1Q13098 491 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 RBM46Q8TBY0 533 aaKnown RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 ULK4Q96C45 1275 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 PARK7Q99497 189 aaKnown RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TJP2Q9UDY2 1190 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 MYBL1P10243 752 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 SERPINI1Q99574 410 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 ANP32DO95626 131 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 FBXW4P57775 412 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 ATP2C1P98194 919 aaPredicted RBP18.36■□□□□ 0.53
SHANK1-201ENST00000293441 KCNA1Q09470 495 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 CAPRIN1Q14444 709 aaKnown RBP18.36■□□□□ 0.53
SHANK1-201ENST00000293441 LCA5Q86VQ0 697 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 CXorf38Q8TB03 319 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 NDUFB10O96000 172 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 COPS2P61201 443 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 TTC39CQ8N584 583 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 RAPGEF5Q92565 580 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
SHANK1-201ENST00000293441 TUBB6Q9BUF5 446 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 KATNAL1Q9BW62 490 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 C19orf81C9J6K1 198 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 ATP8B1O43520 1251 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 CASP8Q14790 479 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 DDX53Q86TM3 631 aaKnown RBP18.36■□□□□ 0.53
SHANK1-201ENST00000293441 RNF135Q8IUD6 432 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 CCDC124Q96CT7 223 aaKnown RBP18.36■□□□□ 0.53
SHANK1-201ENST00000293441 A0A0G2JND7 137 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 RASA4BC9J798 803 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 RASA4O43374 803 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 ZNF543Q08ER8 600 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 GIPC2Q8TF65 315 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 LPAR1Q92633 364 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 TNIP3Q96KP6 325 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 EGFL8Q99944 293 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 PARVAQ9NVD7 372 aa18.36■□□□□ 0.53
SHANK1-201ENST00000293441 SULT1E1P49888 294 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 AP3M2P53677 418 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 PRAMEP78395 509 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 SPARCL1Q14515 664 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 NUGGCQ68CJ6 796 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 KDELC2Q7Z4H8 507 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 PBXIP1Q96AQ6 731 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 DDX56Q9NY93 547 aaKnown RBP18.35■□□□□ 0.53
SHANK1-201ENST00000293441 PPFIA2O75334 1257 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 EEF1B2P24534 225 aaKnown RBP18.35■□□□□ 0.53
SHANK1-201ENST00000293441 BCAR1P56945 870 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 GLE1Q53GS7 698 aaKnown RBP18.35■□□□□ 0.53
SHANK1-201ENST00000293441 FAM117BQ6P1L5 589 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 SH3KBP1Q96B97 665 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 PACSIN2Q9UNF0 486 aaPredicted RBP18.35■□□□□ 0.53
SHANK1-201ENST00000293441 AGAP1Q9UPQ3 857 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 FOXN1O15353 648 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 ACOT2P49753 483 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 HPS3Q969F9 1004 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 RMDN1Q96DB5 314 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 POLRMTO00411 1230 aaKnown RBP18.35■□□□□ 0.53
SHANK1-201ENST00000293441 KRT38O76015 456 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 GH1P01241 217 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 ZNF235Q14590 738 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 ENOSF1Q7L5Y1 443 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 LBHD1Q9BQE6 289 aaPredicted RBP18.35■□□□□ 0.53
SHANK1-201ENST00000293441 SMARCAD1Q9H4L7 1026 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 MAP3K7O43318 606 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 DNAJC6O75061 913 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 RARBP10826 455 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 CDH6P55285 790 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 TRIM72Q6ZMU5 477 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 PPM1NQ8N819 430 aa18.35■□□□□ 0.53
SHANK1-201ENST00000293441 SYNDIG1LA6NDD5 238 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 RPSAP08865 295 aaKnown RBP18.34■□□□□ 0.53
SHANK1-201ENST00000293441 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-201ENST00000293441 CDK17Q00537 523 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-201ENST00000293441 APPL2Q8NEU8 664 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 ANLNQ9NQW6 1124 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 MAPK13O15264 365 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 TTC23LQ6PF05 361 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 SGMS1Q86VZ5 419 aa18.34■□□□□ 0.53
SHANK1-201ENST00000293441 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms