RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Lrrc10bG3XA50 292 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Atp8a2P98200 1148 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Map3k12Q60700 888 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Slain1Q68FF7 579 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Rad54bQ6PFE3 886 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Zfp438Q8BFX2 798 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Lin52Q8CD94 116 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Rnf8Q8VC56 488 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Traf7Q922B6 594 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Cep19Q9CQA8 163 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Prl7c1Q9CRB5 251 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Aldh1b1Q9CZS1 519 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 4931423N10RikQ9D4J9 382 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Sgf29Q9DA08 293 aaKnown RBP7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Ift22Q9DAI2 185 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Il1rapl2Q9ERS6 686 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Gm6133B2RY53 190 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Zfp212G3X8R7 492 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Cdk2ap1O35207 114 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 AaasP58742 546 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Pkn1P70268 946 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Pde1bQ01065 535 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Micall2Q3TN34 1009 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Kansl1lQ5DTI6 991 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Cdcp1Q5U462 833 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 ItgaeQ60677 1167 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Krt39Q6IFX4 482 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Prpf38bQ80SY5 542 aaKnown RBP7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Catsper3Q80W99 395 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Zfp113Q8C689 439 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 RestQ8VIG1 1082 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 PdgfdQ925I7 370 aa7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Ddx47Q9CWX9 455 aaKnown RBP7.63□□□□□ -1.19
Chm-202ENSMUST00000113388 Mcmdc2E9Q956 681 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Sgo2bJ3QMK1 1167 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 FynP39688 537 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 PgfP49764 158 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Lrpap1P55302 360 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Armc2Q3URY6 854 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 CcncQ62447 283 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Tbc1d30Q69ZT9 766 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 ChpfQ6IQX7 774 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Cep70Q6IQY5 616 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Tmem62Q8BXJ9 643 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Usp37Q8C0R0 979 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Plekhn1Q8C886 359 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Fermt2Q8CIB5 680 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Tmcc3Q8R310 477 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Q9CQF4 240 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Lrrc71Q9D3W5 558 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Zc3h7bF8VPP8 982 aaKnown RBP7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Krt4P07744 525 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 RxraP28700 467 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Ric8aQ3TIR3 530 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Nlrc4Q3UP24 1024 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Fam20cQ5MJS3 579 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Best3Q6H1V1 669 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Sh3d21Q7TSG5 549 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Pms1Q8K119 917 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Clptm1Q8VBZ3 664 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Zmynd10Q99ML0 440 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Adam17Q9Z0F8 827 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Myo3bQ1EG27 1305 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Elmsan1E9Q2I4 1089 aaKnown RBP7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Gm6614M0QWR8 670 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Il27raO70394 623 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Itm2bO89051 266 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Cacnb3P54285 484 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Pbxip1Q3TVI8 727 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Ddx31Q6NZQ2 687 aaKnown RBP7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Rbm15bQ6PHZ5 887 aaKnown RBP7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Olfml2aQ8BHP7 681 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Utp15Q8C7V3 528 aaKnown RBP7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Rpap2Q8VC34 614 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 ChiaQ91XA9 473 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Uap1Q91YN5 522 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Cyp4f16Q99N17 524 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Lman1Q9D0F3 517 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Spesp1Q9D5A0 399 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Tor1aQ9ER39 333 aa7.62□□□□□ -1.19
Chm-202ENSMUST00000113388 Gm4340L7N2C4 268 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Bnc1O35914 961 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Tp53P02340 387 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Vcam1P29533 739 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Mark3Q03141 753 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Ptcd3Q14C51 685 aaKnown RBP7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Hsdl2Q2TPA8 490 aaKnown RBP7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Plekhf1Q3TB82 279 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 P2rx3Q3UR32 397 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Dnajc1Q61712 552 aaKnown RBP7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Nucks1Q80XU3 234 aaKnown RBP7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 U2af1l4Q8BGJ9 220 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Ccdc17Q8CE13 565 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Fam32aQ9CR80 112 aaKnown RBP7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Acsl4Q9QUJ7 711 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Ankrd63A2ARS0 390 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Phf11A6H5X4 337 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Krt78E9Q0F0 1068 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 TsksO54887 585 aa7.61□□□□□ -1.19
Chm-202ENSMUST00000113388 Zbtb7aO88939 569 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms