Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Gm25239-201ENSMUST00000174915 86 ntBASIC38.11■■■■□ 3.69
Clptm1Q8VBZ3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Clptm1Q8VBZ3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Clptm1Q8VBZ3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Clptm1Q8VBZ3 Gm15042-201ENSMUST00000120212 883 ntBASIC33.11■■■□□ 2.89
Clptm1Q8VBZ3 Gm24109-201ENSMUST00000175489 103 ntBASIC33.1■■■□□ 2.89
Clptm1Q8VBZ3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.37■■■□□ 2.77
Clptm1Q8VBZ3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Clptm1Q8VBZ3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Clptm1Q8VBZ3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Clptm1Q8VBZ3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Clptm1Q8VBZ3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32■■■□□ 2.71
Clptm1Q8VBZ3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Clptm1Q8VBZ3 Gm23366-201ENSMUST00000175022 89 ntBASIC31.77■■■□□ 2.68
Clptm1Q8VBZ3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Clptm1Q8VBZ3 Psd-208ENSMUST00000224556 2034 ntBASIC31.39■■■□□ 2.62
Clptm1Q8VBZ3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Clptm1Q8VBZ3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.97■■■□□ 2.55
Clptm1Q8VBZ3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Clptm1Q8VBZ3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Clptm1Q8VBZ3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.73■■■□□ 2.51
Clptm1Q8VBZ3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.61■■■□□ 2.49
Clptm1Q8VBZ3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Clptm1Q8VBZ3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Clptm1Q8VBZ3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Clptm1Q8VBZ3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.33■■■□□ 2.45
Clptm1Q8VBZ3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Clptm1Q8VBZ3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Clptm1Q8VBZ3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Clptm1Q8VBZ3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Clptm1Q8VBZ3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Clptm1Q8VBZ3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Clptm1Q8VBZ3 Gm25238-201ENSMUST00000174914 89 ntBASIC30.16■■■□□ 2.42
Clptm1Q8VBZ3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.12■■■□□ 2.41
Clptm1Q8VBZ3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Clptm1Q8VBZ3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clptm1Q8VBZ3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clptm1Q8VBZ3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Clptm1Q8VBZ3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Clptm1Q8VBZ3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Clptm1Q8VBZ3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Clptm1Q8VBZ3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Clptm1Q8VBZ3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.68■■■□□ 2.34
Clptm1Q8VBZ3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Clptm1Q8VBZ3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
Clptm1Q8VBZ3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Clptm1Q8VBZ3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Clptm1Q8VBZ3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Clptm1Q8VBZ3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Clptm1Q8VBZ3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.27■■■□□ 2.28
Clptm1Q8VBZ3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.24■■■□□ 2.27
Clptm1Q8VBZ3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Clptm1Q8VBZ3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
Clptm1Q8VBZ3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.12■■■□□ 2.25
Clptm1Q8VBZ3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Clptm1Q8VBZ3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.99■■■□□ 2.23
Clptm1Q8VBZ3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.94■■■□□ 2.22
Clptm1Q8VBZ3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.93■■■□□ 2.22
Clptm1Q8VBZ3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Clptm1Q8VBZ3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Clptm1Q8VBZ3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Clptm1Q8VBZ3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.77■■■□□ 2.2
Clptm1Q8VBZ3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Clptm1Q8VBZ3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Clptm1Q8VBZ3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Clptm1Q8VBZ3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Clptm1Q8VBZ3 Rab21-202ENSMUST00000218831 843 ntBASIC28.57■■■□□ 2.16
Clptm1Q8VBZ3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Clptm1Q8VBZ3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Clptm1Q8VBZ3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Clptm1Q8VBZ3 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.54■■■□□ 2.16
Clptm1Q8VBZ3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.51■■■□□ 2.15
Clptm1Q8VBZ3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.48■■■□□ 2.15
Clptm1Q8VBZ3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Clptm1Q8VBZ3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.45■■■□□ 2.14
Clptm1Q8VBZ3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Clptm1Q8VBZ3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.4■■■□□ 2.14
Clptm1Q8VBZ3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.4■■■□□ 2.14
Clptm1Q8VBZ3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.39■■■□□ 2.14
Clptm1Q8VBZ3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Clptm1Q8VBZ3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.37■■■□□ 2.13
Clptm1Q8VBZ3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Clptm1Q8VBZ3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Clptm1Q8VBZ3 Gm26115-201ENSMUST00000175605 87 ntBASIC28.28■■■□□ 2.12
Clptm1Q8VBZ3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Clptm1Q8VBZ3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Clptm1Q8VBZ3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Clptm1Q8VBZ3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.24■■■□□ 2.11
Clptm1Q8VBZ3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Clptm1Q8VBZ3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Clptm1Q8VBZ3 Gm8109-201ENSMUST00000194076 746 ntBASIC28.15■■■□□ 2.1
Clptm1Q8VBZ3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Clptm1Q8VBZ3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Clptm1Q8VBZ3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
Clptm1Q8VBZ3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.09■■■□□ 2.09
Clptm1Q8VBZ3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Clptm1Q8VBZ3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Clptm1Q8VBZ3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Clptm1Q8VBZ3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.05■■■□□ 2.08
Clptm1Q8VBZ3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms