Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Gm25239-201ENSMUST00000174915 86 ntBASIC36.18■■■■□ 3.38
Sgo2bJ3QMK1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Sgo2bJ3QMK1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Sgo2bJ3QMK1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Sgo2bJ3QMK1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
Sgo2bJ3QMK1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Sgo2bJ3QMK1 Gm15042-201ENSMUST00000120212 883 ntBASIC32.21■■■□□ 2.75
Sgo2bJ3QMK1 Psd-208ENSMUST00000224556 2034 ntBASIC31.92■■■□□ 2.7
Sgo2bJ3QMK1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Sgo2bJ3QMK1 Gm15045-201ENSMUST00000117359 883 ntBASIC31.64■■■□□ 2.66
Sgo2bJ3QMK1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
Sgo2bJ3QMK1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.17■■■□□ 2.58
Sgo2bJ3QMK1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Sgo2bJ3QMK1 Gm24109-201ENSMUST00000175489 103 ntBASIC31.12■■■□□ 2.57
Sgo2bJ3QMK1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sgo2bJ3QMK1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sgo2bJ3QMK1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Sgo2bJ3QMK1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sgo2bJ3QMK1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Sgo2bJ3QMK1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Sgo2bJ3QMK1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Sgo2bJ3QMK1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Sgo2bJ3QMK1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sgo2bJ3QMK1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sgo2bJ3QMK1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
Sgo2bJ3QMK1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Sgo2bJ3QMK1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.34■■■□□ 2.45
Sgo2bJ3QMK1 Gm23366-201ENSMUST00000175022 89 ntBASIC30.28■■■□□ 2.44
Sgo2bJ3QMK1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Sgo2bJ3QMK1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sgo2bJ3QMK1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Sgo2bJ3QMK1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Sgo2bJ3QMK1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Sgo2bJ3QMK1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.01■■■□□ 2.4
Sgo2bJ3QMK1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sgo2bJ3QMK1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Sgo2bJ3QMK1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Sgo2bJ3QMK1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Sgo2bJ3QMK1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Sgo2bJ3QMK1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Sgo2bJ3QMK1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.55■■■□□ 2.32
Sgo2bJ3QMK1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.47■■■□□ 2.31
Sgo2bJ3QMK1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sgo2bJ3QMK1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.34■■■□□ 2.29
Sgo2bJ3QMK1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sgo2bJ3QMK1 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.24■■■□□ 2.27
Sgo2bJ3QMK1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Sgo2bJ3QMK1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Sgo2bJ3QMK1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Sgo2bJ3QMK1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Sgo2bJ3QMK1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sgo2bJ3QMK1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Sgo2bJ3QMK1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Sgo2bJ3QMK1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.73■■■□□ 2.19
Sgo2bJ3QMK1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Sgo2bJ3QMK1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Sgo2bJ3QMK1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.61■■■□□ 2.17
Sgo2bJ3QMK1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Sgo2bJ3QMK1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Sgo2bJ3QMK1 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.51■■■□□ 2.15
Sgo2bJ3QMK1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.49■■■□□ 2.15
Sgo2bJ3QMK1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Sgo2bJ3QMK1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sgo2bJ3QMK1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.47■■■□□ 2.15
Sgo2bJ3QMK1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Sgo2bJ3QMK1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Sgo2bJ3QMK1 Gm25238-201ENSMUST00000174914 89 ntBASIC28.38■■■□□ 2.13
Sgo2bJ3QMK1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Sgo2bJ3QMK1 Gm27325-201ENSMUST00000175467 74 ntBASIC28.35■■■□□ 2.13
Sgo2bJ3QMK1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sgo2bJ3QMK1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.35■■■□□ 2.13
Sgo2bJ3QMK1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.33■■■□□ 2.13
Sgo2bJ3QMK1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.24■■■□□ 2.11
Sgo2bJ3QMK1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Sgo2bJ3QMK1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sgo2bJ3QMK1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Sgo2bJ3QMK1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sgo2bJ3QMK1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Sgo2bJ3QMK1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.08■■■□□ 2.09
Sgo2bJ3QMK1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sgo2bJ3QMK1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sgo2bJ3QMK1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sgo2bJ3QMK1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Sgo2bJ3QMK1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sgo2bJ3QMK1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sgo2bJ3QMK1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Sgo2bJ3QMK1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sgo2bJ3QMK1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sgo2bJ3QMK1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
Sgo2bJ3QMK1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Sgo2bJ3QMK1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Sgo2bJ3QMK1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sgo2bJ3QMK1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sgo2bJ3QMK1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sgo2bJ3QMK1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.76■■■□□ 2.04
Sgo2bJ3QMK1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sgo2bJ3QMK1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
Sgo2bJ3QMK1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Sgo2bJ3QMK1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.65■■■□□ 2.02
Sgo2bJ3QMK1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.64■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms