Protein–RNA interactions for Protein: Q8CD94

Lin52, Protein lin-52 homolog, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin52Q8CD94 Gm25239-201ENSMUST00000174915 86 ntBASIC33.3■■■□□ 2.92
Lin52Q8CD94 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Lin52Q8CD94 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Lin52Q8CD94 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Lin52Q8CD94 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Lin52Q8CD94 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Lin52Q8CD94 Psd-208ENSMUST00000224556 2034 ntBASIC30.84■■■□□ 2.53
Lin52Q8CD94 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Lin52Q8CD94 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Lin52Q8CD94 Gm15042-201ENSMUST00000120212 883 ntBASIC29.72■■■□□ 2.35
Lin52Q8CD94 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Lin52Q8CD94 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Lin52Q8CD94 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Lin52Q8CD94 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Lin52Q8CD94 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Lin52Q8CD94 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Lin52Q8CD94 Gm15045-201ENSMUST00000117359 883 ntBASIC29.12■■■□□ 2.25
Lin52Q8CD94 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Lin52Q8CD94 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Lin52Q8CD94 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Lin52Q8CD94 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Lin52Q8CD94 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Lin52Q8CD94 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Lin52Q8CD94 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.75■■■□□ 2.19
Lin52Q8CD94 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Lin52Q8CD94 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Lin52Q8CD94 Gm24109-201ENSMUST00000175489 103 ntBASIC28.57■■■□□ 2.16
Lin52Q8CD94 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Lin52Q8CD94 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Lin52Q8CD94 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.25■■■□□ 2.11
Lin52Q8CD94 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lin52Q8CD94 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Lin52Q8CD94 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Lin52Q8CD94 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Lin52Q8CD94 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Lin52Q8CD94 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Lin52Q8CD94 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lin52Q8CD94 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.98■■■□□ 2.07
Lin52Q8CD94 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Lin52Q8CD94 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.97■■■□□ 2.07
Lin52Q8CD94 Gm23366-201ENSMUST00000175022 89 ntBASIC27.93■■■□□ 2.06
Lin52Q8CD94 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Lin52Q8CD94 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Lin52Q8CD94 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Lin52Q8CD94 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Lin52Q8CD94 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Lin52Q8CD94 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.76■■■□□ 2.03
Lin52Q8CD94 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Lin52Q8CD94 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.72■■■□□ 2.03
Lin52Q8CD94 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Lin52Q8CD94 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Lin52Q8CD94 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lin52Q8CD94 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
Lin52Q8CD94 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Lin52Q8CD94 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Lin52Q8CD94 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Lin52Q8CD94 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Lin52Q8CD94 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.26■■□□□ 1.96
Lin52Q8CD94 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.25■■□□□ 1.95
Lin52Q8CD94 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Lin52Q8CD94 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.12■■□□□ 1.93
Lin52Q8CD94 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lin52Q8CD94 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Lin52Q8CD94 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lin52Q8CD94 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Lin52Q8CD94 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Lin52Q8CD94 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Lin52Q8CD94 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Lin52Q8CD94 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Lin52Q8CD94 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Lin52Q8CD94 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Lin52Q8CD94 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.71■■□□□ 1.87
Lin52Q8CD94 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Lin52Q8CD94 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.69■■□□□ 1.86
Lin52Q8CD94 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Lin52Q8CD94 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Lin52Q8CD94 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.63■■□□□ 1.85
Lin52Q8CD94 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Lin52Q8CD94 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Lin52Q8CD94 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Lin52Q8CD94 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Lin52Q8CD94 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lin52Q8CD94 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Lin52Q8CD94 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lin52Q8CD94 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Lin52Q8CD94 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.44■■□□□ 1.82
Lin52Q8CD94 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lin52Q8CD94 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lin52Q8CD94 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Lin52Q8CD94 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.37■■□□□ 1.81
Lin52Q8CD94 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lin52Q8CD94 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lin52Q8CD94 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Lin52Q8CD94 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lin52Q8CD94 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lin52Q8CD94 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lin52Q8CD94 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Lin52Q8CD94 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Lin52Q8CD94 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Lin52Q8CD94 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms