Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm25239-201ENSMUST00000174915 86 ntBASIC40.28■■■■■ 4.04
Prpf38bQ80SY5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
Prpf38bQ80SY5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Prpf38bQ80SY5 Gm24109-201ENSMUST00000175489 103 ntBASIC35.32■■■■□ 3.24
Prpf38bQ80SY5 Gm15042-201ENSMUST00000120212 883 ntBASIC34.46■■■■□ 3.11
Prpf38bQ80SY5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Prpf38bQ80SY5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
Prpf38bQ80SY5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Prpf38bQ80SY5 Gm23366-201ENSMUST00000175022 89 ntBASIC33.63■■■□□ 2.97
Prpf38bQ80SY5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Prpf38bQ80SY5 Gm15045-201ENSMUST00000117359 883 ntBASIC33.49■■■□□ 2.95
Prpf38bQ80SY5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Prpf38bQ80SY5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.16■■■□□ 2.9
Prpf38bQ80SY5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33■■■□□ 2.87
Prpf38bQ80SY5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Prpf38bQ80SY5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Prpf38bQ80SY5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.69■■■□□ 2.82
Prpf38bQ80SY5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Prpf38bQ80SY5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Prpf38bQ80SY5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.27■■■□□ 2.76
Prpf38bQ80SY5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Prpf38bQ80SY5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
Prpf38bQ80SY5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Prpf38bQ80SY5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Prpf38bQ80SY5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Prpf38bQ80SY5 Gm25238-201ENSMUST00000174914 89 ntBASIC32.01■■■□□ 2.71
Prpf38bQ80SY5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Prpf38bQ80SY5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
Prpf38bQ80SY5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
Prpf38bQ80SY5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Prpf38bQ80SY5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Prpf38bQ80SY5 Gm25262-201ENSMUST00000174934 133 ntBASIC31.21■■■□□ 2.59
Prpf38bQ80SY5 Psd-208ENSMUST00000224556 2034 ntBASIC31.17■■■□□ 2.58
Prpf38bQ80SY5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.09■■■□□ 2.57
Prpf38bQ80SY5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.96■■■□□ 2.55
Prpf38bQ80SY5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
Prpf38bQ80SY5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.79■■■□□ 2.52
Prpf38bQ80SY5 Gm26115-201ENSMUST00000175605 87 ntBASIC30.78■■■□□ 2.52
Prpf38bQ80SY5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.73■■■□□ 2.51
Prpf38bQ80SY5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.73■■■□□ 2.51
Prpf38bQ80SY5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Prpf38bQ80SY5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Prpf38bQ80SY5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.54■■■□□ 2.48
Prpf38bQ80SY5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Prpf38bQ80SY5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Prpf38bQ80SY5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Prpf38bQ80SY5 Gm8109-201ENSMUST00000194076 746 ntBASIC30.38■■■□□ 2.45
Prpf38bQ80SY5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Prpf38bQ80SY5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Prpf38bQ80SY5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Prpf38bQ80SY5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Prpf38bQ80SY5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Prpf38bQ80SY5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.1■■■□□ 2.41
Prpf38bQ80SY5 Rab21-202ENSMUST00000218831 843 ntBASIC30.09■■■□□ 2.41
Prpf38bQ80SY5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Prpf38bQ80SY5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Prpf38bQ80SY5 Gm27325-201ENSMUST00000175467 74 ntBASIC30.05■■■□□ 2.4
Prpf38bQ80SY5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Prpf38bQ80SY5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.99■■■□□ 2.39
Prpf38bQ80SY5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Prpf38bQ80SY5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Prpf38bQ80SY5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.82■■■□□ 2.36
Prpf38bQ80SY5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Prpf38bQ80SY5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Prpf38bQ80SY5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Prpf38bQ80SY5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.71■■■□□ 2.35
Prpf38bQ80SY5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Prpf38bQ80SY5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.61■■■□□ 2.33
Prpf38bQ80SY5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Prpf38bQ80SY5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
Prpf38bQ80SY5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Prpf38bQ80SY5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Prpf38bQ80SY5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.5■■■□□ 2.31
Prpf38bQ80SY5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Prpf38bQ80SY5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Prpf38bQ80SY5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Prpf38bQ80SY5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Prpf38bQ80SY5 Gm24804-201ENSMUST00000174982 85 ntBASIC29.35■■■□□ 2.29
Prpf38bQ80SY5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Prpf38bQ80SY5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Prpf38bQ80SY5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Prpf38bQ80SY5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Prpf38bQ80SY5 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.2■■■□□ 2.26
Prpf38bQ80SY5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Prpf38bQ80SY5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Prpf38bQ80SY5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Prpf38bQ80SY5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.13■■■□□ 2.25
Prpf38bQ80SY5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Prpf38bQ80SY5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Prpf38bQ80SY5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Prpf38bQ80SY5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.99■■■□□ 2.23
Prpf38bQ80SY5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Prpf38bQ80SY5 Zfp131-205ENSMUST00000223812 663 ntBASIC28.95■■■□□ 2.22
Prpf38bQ80SY5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.93■■■□□ 2.22
Prpf38bQ80SY5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Prpf38bQ80SY5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.89■■■□□ 2.22
Prpf38bQ80SY5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Prpf38bQ80SY5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Prpf38bQ80SY5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
Prpf38bQ80SY5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms