RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR60, Length 104 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR60	snR60	YOR268C	Q08734	132 aa		0.5	□□□□□ -2.33
snR60	snR60	HMX1	P32339	317 aa		0.49	□□□□□ -2.33
snR60	snR60	GPX1	P36014	167 aa		0.49	□□□□□ -2.33
snR60	snR60	SUR2	P38992	349 aa		0.49	□□□□□ -2.33
snR60	snR60	CAB4	P53332	305 aa		0.49	□□□□□ -2.33
snR60	snR60	YNR068C	P53754	272 aa		0.49	□□□□□ -2.33
snR60	snR60	INM2	Q05533	292 aa		0.49	□□□□□ -2.33
snR60	snR60	YDL144C	Q07589	356 aa		0.49	□□□□□ -2.33
snR60	snR60	MAS1	P10507	462 aa		0.48	□□□□□ -2.33
snR60	snR60	ATG15	P25641	520 aa		0.48	□□□□□ -2.33
snR60	snR60	FAA1	P30624	700 aa	Known RBP	0.48	□□□□□ -2.33
snR60	snR60	CDC13	P32797	924 aa	Known RBP	0.48	□□□□□ -2.33
snR60	snR60	MRPL6	P32904	214 aa		0.48	□□□□□ -2.33
snR60	snR60	MBA1	P38300	278 aa		0.48	□□□□□ -2.33
snR60	snR60	SPL2	P38839	148 aa		0.48	□□□□□ -2.33
snR60	snR60	YER135C	P40082	130 aa		0.48	□□□□□ -2.33
snR60	snR60	RSC1	P53236	928 aa		0.48	□□□□□ -2.33
snR60	snR60	NNT1	Q05874	261 aa		0.48	□□□□□ -2.33
snR60	snR60	ATG5	Q12380	294 aa		0.48	□□□□□ -2.33
snR60	snR60	YCR102C	P25608	368 aa		0.47	□□□□□ -2.33
snR60	snR60	SOP4	P39543	234 aa	Predicted RBP	0.47	□□□□□ -2.33
snR60	snR60	AVT6	P40074	448 aa		0.47	□□□□□ -2.33
snR60	snR60	YJL016W	P47072	561 aa		0.47	□□□□□ -2.33
snR60	snR60	YML6	P51998	286 aa		0.47	□□□□□ -2.33
snR60	snR60	VPS9	P54787	451 aa		0.47	□□□□□ -2.33
snR60	snR60	UTP6	Q02354	440 aa	Known RBP	0.47	□□□□□ -2.33
snR60	snR60	YPL247C	Q12523	523 aa		0.47	□□□□□ -2.33
snR60	snR60	UBA1	P22515	1024 aa	Known RBP	0.46	□□□□□ -2.34
snR60	snR60	RBK1	P25332	333 aa		0.46	□□□□□ -2.34
snR60	snR60	RDS1	P25611	832 aa		0.46	□□□□□ -2.34
snR60	snR60	PUP2	P32379	260 aa		0.46	□□□□□ -2.34
snR60	snR60	MEI5	P32489	222 aa		0.46	□□□□□ -2.34
snR60	snR60	MDL1	P33310	695 aa		0.46	□□□□□ -2.34
snR60	snR60	PXA2	P34230	853 aa		0.46	□□□□□ -2.34
snR60	snR60	MRPL3	P36516	390 aa		0.46	□□□□□ -2.34
snR60	snR60	YFL040W	P43562	540 aa		0.46	□□□□□ -2.34
snR60	snR60	TPN1	P53099	579 aa		0.46	□□□□□ -2.34
snR60	snR60	YMR310C	Q04867	317 aa	Predicted RBP	0.46	□□□□□ -2.34
snR60	snR60	SMC6	Q12749	1114 aa		0.46	□□□□□ -2.34
snR60	snR60	HSP82	P02829	709 aa	Known RBP	0.45	□□□□□ -2.34
snR60	snR60	CDC7	P06243	507 aa		0.45	□□□□□ -2.34
snR60	snR60	RAD10	P06838	210 aa		0.45	□□□□□ -2.34
snR60	snR60	YCR025C	P25352	136 aa		0.45	□□□□□ -2.34
snR60	snR60	CIN8	P27895	1000 aa		0.45	□□□□□ -2.34
snR60	snR60	MYO3	P36006	1272 aa		0.45	□□□□□ -2.34
snR60	snR60	GDT1	P38301	280 aa	Predicted RBP	0.45	□□□□□ -2.34
snR60	snR60	YHL026C	P38740	315 aa		0.45	□□□□□ -2.34
snR60	snR60	YDR089W	P38966	869 aa		0.45	□□□□□ -2.34
snR60	snR60	BTT1	P40314	149 aa	Predicted RBP	0.45	□□□□□ -2.34
snR60	snR60	PRP24	P49960	444 aa	Known RBP	0.45	□□□□□ -2.34
snR60	snR60	TAF6	P53040	516 aa		0.45	□□□□□ -2.34
snR60	snR60	PXR1	P53335	271 aa	Predicted RBP	0.45	□□□□□ -2.34
snR60	snR60	YLR446W	Q06204	433 aa		0.45	□□□□□ -2.34
snR60	snR60	YPL278C	Q08990	100 aa		0.45	□□□□□ -2.34
snR60	snR60	GLE1	Q12315	538 aa		0.45	□□□□□ -2.34
snR60	snR60	NOT5	Q12514	560 aa	Predicted RBP	0.45	□□□□□ -2.34
snR60	snR60	TOM40	P23644	387 aa	Known RBP	0.44	□□□□□ -2.34
snR60	snR60	IFM1	P25038	676 aa		0.44	□□□□□ -2.34
snR60	snR60	ACB1	P31787	87 aa		0.44	□□□□□ -2.34
snR60	snR60	YBR062C	P38239	180 aa		0.44	□□□□□ -2.34
snR60	snR60	CAJ1	P39101	391 aa		0.44	□□□□□ -2.34
snR60	snR60	YIL012W	P40551	113 aa		0.44	□□□□□ -2.34
snR60	snR60	NUP57	P48837	541 aa		0.44	□□□□□ -2.34
snR60	snR60	STE23	Q06010	1027 aa		0.44	□□□□□ -2.34
snR60	snR60	LAG2	Q92325	660 aa		0.44	□□□□□ -2.34
snR60	snR60	RPL6B	P05739	176 aa	Known RBP	0.43	□□□□□ -2.34
snR60	snR60	RAD7	P06779	565 aa		0.43	□□□□□ -2.34
snR60	snR60	ERD1	P16151	362 aa		0.43	□□□□□ -2.34
snR60	snR60	OSM1	P21375	501 aa	Known RBP	0.43	□□□□□ -2.34
snR60	snR60	KRE6	P32486	720 aa		0.43	□□□□□ -2.34
snR60	snR60	DOA4	P32571	926 aa		0.43	□□□□□ -2.34
snR60	snR60	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	not detected
snR60	snR60	VAB2	P40003	282 aa		0.43	□□□□□ -2.34
snR60	snR60	TIF34	P40217	347 aa	Known RBP	0.43	□□□□□ -2.34
snR60	snR60	YJL055W	P47044	245 aa		0.43	□□□□□ -2.34
snR60	snR60	COG7	P53195	279 aa		0.43	□□□□□ -2.34
snR60	snR60	RPL6A	Q02326	176 aa	Known RBP	0.43	□□□□□ -2.34
snR60	snR60	MZM1	Q03429	123 aa	Predicted RBP	0.43	□□□□□ -2.34
snR60	snR60	YLL007C	Q07799	665 aa		0.43	□□□□□ -2.34
snR60	snR60	TFB5	Q3E7C1	72 aa	Predicted RBP	0.43	□□□□□ -2.34
snR60	snR60	IMP1	P28627	190 aa		0.42	□□□□□ -2.34
snR60	snR60	TPO5	P36029	618 aa		0.42	□□□□□ -2.34
snR60	snR60	MCH2	P36032	473 aa		0.42	□□□□□ -2.34
snR60	snR60	YSW1	P38280	609 aa		0.42	□□□□□ -2.34
snR60	snR60	DSE2	P38844	325 aa		0.42	□□□□□ -2.34
snR60	snR60	DAD3	P69850	94 aa		0.42	□□□□□ -2.34
snR60	snR60	ISD11	Q6Q560	94 aa		0.42	□□□□□ -2.34
snR60	snR60	RGS2	Q99188	309 aa		0.42	□□□□□ -2.34
snR60	snR60	PAN1	P32521	1480 aa		0.41	□□□□□ -2.34
snR60	snR60	SGA1	P08019	549 aa		0.41	□□□□□ -2.34
snR60	snR60	YOL162W	P0CF19	215 aa		0.41	□□□□□ -2.34
snR60	snR60	HXT2	P23585	541 aa		0.41	□□□□□ -2.34
snR60	snR60	RPL16B	P26785	198 aa	Known RBP	0.41	□□□□□ -2.34
snR60	snR60	KRE29	P40026	464 aa		0.41	□□□□□ -2.34
snR60	snR60	PEP8	P40335	379 aa		0.41	□□□□□ -2.34
snR60	snR60	RPA34	P47006	233 aa	Predicted RBP	0.41	□□□□□ -2.34
snR60	snR60	YPT32	P51996	222 aa	Known RBP	0.41	□□□□□ -2.34
snR60	snR60	SWT21	P53873	357 aa	Predicted RBP	0.41	□□□□□ -2.34
snR60	snR60	NUP49	Q02199	472 aa		0.41	□□□□□ -2.34
snR60	snR60	SNX41	Q04053	625 aa		0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms