RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 TVP15Q03860 143 aa0.37□□□□□ -2.35
snR56snR56 MRPL6P32904 214 aa0.36□□□□□ -2.35
snR56snR56 SPL2P38839 148 aa0.36□□□□□ -2.35
snR56snR56 GPX1P36014 167 aa0.35□□□□□ -2.35
snR56snR56 PEX32P38292 413 aa0.35□□□□□ -2.35
snR56snR56 YDR089WP38966 869 aa0.35□□□□□ -2.35
snR56snR56 YHC3P47040 408 aa0.35□□□□□ -2.35
snR56snR56 GYL1Q04322 720 aa0.35□□□□□ -2.35
snR56snR56 YOL019WQ08157 551 aa0.35□□□□□ -2.35
snR56snR56 MYO3P36006 1272 aa0.34□□□□□ -2.36
snR56snR56 SUR2P38992 349 aa0.34□□□□□ -2.36
snR56snR56 YIL012WP40551 113 aa0.34□□□□□ -2.36
snR56snR56 YJL016WP47072 561 aa0.34□□□□□ -2.36
snR56snR56 DOA4P32571 926 aa0.33□□□□□ -2.36
snR56snR56 YHL026CP38740 315 aa0.33□□□□□ -2.36
snR56snR56 TPN1P53099 579 aa0.33□□□□□ -2.36
snR56snR56 ATG5Q12380 294 aa0.33□□□□□ -2.36
snR56snR56 SGA1P08019 549 aa0.32□□□□□ -2.36
snR56snR56 YCR025CP25352 136 aa0.32□□□□□ -2.36
snR56snR56 RPN12P32496 274 aa0.32□□□□□ -2.36
snR56snR56 AVT6P40074 448 aa0.32□□□□□ -2.36
snR56snR56 YFH1Q07540 174 aa0.32□□□□□ -2.36
snR56snR56 YPL278CQ08990 100 aa0.32□□□□□ -2.36
snR56snR56 RPL10P41805 221 aaKnown RBP0.31□□□□□ -2.36
snR56snR56 YLR012CQ07927 99 aa0.31□□□□□ -2.36
snR56snR56 GCG1P32656 232 aaKnown RBP0.3□□□□□ -2.36
snR56snR56 YKR045CP36138 183 aa0.3□□□□□ -2.36
snR56snR56 EFM4P40516 257 aa0.3□□□□□ -2.36
snR56snR56 PRP24P49960 444 aaKnown RBP0.3□□□□□ -2.36
snR56snR56 YDL144CQ07589 356 aa0.3□□□□□ -2.36
snR56snR56 PAN1P32521 1480 aa0.29□□□□□ -2.36
snR56snR56 MEI5P32489 222 aa0.29□□□□□ -2.36
snR56snR56 PEP8P40335 379 aa0.29□□□□□ -2.36
snR56snR56 YIL089WP40500 205 aa0.29□□□□□ -2.36
snR56snR56 MZM1Q03429 123 aaPredicted RBP0.29□□□□□ -2.36
snR56snR56 THR4P16120 514 aaKnown RBP0.28□□□□□ -2.36
snR56snR56 SKI2P35207 1287 aaKnown RBP RIP-Chip data0.28□□□□□ -2.36not detected
snR56snR56 MRPL3P36516 390 aa0.28□□□□□ -2.36
snR56snR56 YBR062CP38239 180 aa0.28□□□□□ -2.36
snR56snR56 YHR122WP38829 231 aa0.28□□□□□ -2.36
snR56snR56 YMR134WP40207 237 aa0.28□□□□□ -2.36
snR56snR56 YJL118WP47022 219 aa0.28□□□□□ -2.36
snR56snR56 STE23Q06010 1027 aa0.28□□□□□ -2.36
snR56snR56 YER188C-AP0C0V2 99 aa0.27□□□□□ -2.37
snR56snR56 MAS1P10507 462 aa0.27□□□□□ -2.37
snR56snR56 KRE6P32486 720 aa0.27□□□□□ -2.37
snR56snR56 GLE2P40066 365 aa0.27□□□□□ -2.37
snR56snR56 MLC1P53141 149 aa0.27□□□□□ -2.37
snR56snR56 GLE1Q12315 538 aa0.27□□□□□ -2.37
snR56snR56 ERD1P16151 362 aa0.26□□□□□ -2.37
snR56snR56 TOM40P23644 387 aaKnown RBP0.26□□□□□ -2.37
snR56snR56 HMX1P32339 317 aa0.26□□□□□ -2.37
snR56snR56 NUP157P40064 1391 aaKnown RBP0.25□□□□□ -2.37
snR56snR56 CIN8P27895 1000 aa0.25□□□□□ -2.37
snR56snR56 IMP1P28627 190 aa0.25□□□□□ -2.37
snR56snR56 SOP4P39543 234 aaPredicted RBP0.25□□□□□ -2.37
snR56snR56 LAG2Q92325 660 aa0.25□□□□□ -2.37
snR56snR56 UBR2Q07963 1872 aa0.24□□□□□ -2.37
snR56snR56 RAD7P06779 565 aa0.24□□□□□ -2.37
snR56snR56 JNM1P36224 373 aa0.24□□□□□ -2.37
snR56snR56 TRM44Q02648 567 aaKnown RBP0.24□□□□□ -2.37
snR56snR56 YMR310CQ04867 317 aaPredicted RBP0.24□□□□□ -2.37
snR56snR56 YLL007CQ07799 665 aa0.24□□□□□ -2.37
snR56snR56 RPL16BP26785 198 aaKnown RBP0.23□□□□□ -2.37
snR56snR56 YGL114WP53134 725 aa0.23□□□□□ -2.37
snR56snR56 YNR068CP53754 272 aa0.23□□□□□ -2.37
snR56snR56 SWT21P53873 357 aaPredicted RBP0.23□□□□□ -2.37
snR56snR56 NOT5Q12514 560 aaPredicted RBP0.23□□□□□ -2.37
snR56snR56 HXT2P23585 541 aa0.22□□□□□ -2.37
snR56snR56 RBK1P25332 333 aa0.22□□□□□ -2.37
snR56snR56 SFC1P33303 322 aa0.22□□□□□ -2.37
snR56snR56 TIF34P40217 347 aaKnown RBP0.22□□□□□ -2.37
snR56snR56 CIS3P47001 227 aa0.22□□□□□ -2.37
snR56snR56 PXR1P53335 271 aaPredicted RBP0.22□□□□□ -2.37
snR56snR56 CAB5Q03941 241 aa0.22□□□□□ -2.37
snR56snR56 ISD11Q6Q560 94 aa0.22□□□□□ -2.37
snR56snR56 OSM1P21375 501 aaKnown RBP0.21□□□□□ -2.38
snR56snR56 PUP2P32379 260 aa0.21□□□□□ -2.38
snR56snR56 CAT2P32796 670 aaKnown RBP0.21□□□□□ -2.38
snR56snR56 GON7P46984 123 aa0.21□□□□□ -2.38
snR56snR56 DAD3P69850 94 aa0.21□□□□□ -2.38
snR56snR56 SPC19Q03954 165 aa0.21□□□□□ -2.38
snR56snR56 FAA1P30624 700 aaKnown RBP0.2□□□□□ -2.38
snR56snR56 TPO5P36029 618 aa0.2□□□□□ -2.38
snR56snR56 KRE29P40026 464 aa0.2□□□□□ -2.38
snR56snR56 COG7P53195 279 aa0.2□□□□□ -2.38
snR56snR56 YMR114CQ04471 368 aaKnown RBP0.2□□□□□ -2.38
snR56snR56 YLR446WQ06204 433 aa0.2□□□□□ -2.38
snR56snR56 RAS2P01120 322 aaKnown RBP0.19□□□□□ -2.38
snR56snR56 HSP82P02829 709 aaKnown RBP0.19□□□□□ -2.38
snR56snR56 PUT1P09368 476 aa0.19□□□□□ -2.38
snR56snR56 TAF6P53040 516 aa0.19□□□□□ -2.38
snR56snR56 YNL143CP53908 130 aa0.19□□□□□ -2.38
snR56snR56 MRS2Q01926 470 aa0.19□□□□□ -2.38
snR56snR56 UTP6Q02354 440 aaKnown RBP0.19□□□□□ -2.38
snR56snR56 YGL010WP25338 174 aa0.18□□□□□ -2.38
snR56snR56 SCM4P32564 187 aa0.18□□□□□ -2.38
snR56snR56 BTT1P40314 149 aaPredicted RBP0.18□□□□□ -2.38
snR56snR56 YFL040WP43562 540 aa0.18□□□□□ -2.38
snR56snR56 YBL112CQ3E7Y4 105 aa0.18□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms