RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 ASC1P38011 319 aaKnown RBP-2.42□□□□□ -2.8
snR53snR53 OLA1P38219 394 aaKnown RBP-2.42□□□□□ -2.8
snR53snR53 COG7P53195 279 aa-2.42□□□□□ -2.8
snR53snR53 ATO3Q12359 275 aa-2.42□□□□□ -2.8
snR53snR53 RPN6Q12377 434 aa-2.42□□□□□ -2.8
snR53snR53 ATG5Q12380 294 aa-2.42□□□□□ -2.8
snR53snR53 RRP7P25368 297 aaPredicted RBP-2.43□□□□□ -2.8
snR53snR53 FYV8P46949 817 aaKnown RBP-2.43□□□□□ -2.8
snR53snR53 RPE1P46969 238 aa-2.43□□□□□ -2.8
snR53snR53 YNR066CP53752 436 aa-2.43□□□□□ -2.8
snR53snR53 SMP3Q04174 516 aa-2.43□□□□□ -2.8
snR53snR53 NOT5Q12514 560 aaPredicted RBP-2.43□□□□□ -2.8
snR53snR53 YNL146C-AQ3E7Z1 64 aa-2.43□□□□□ -2.8
snR53snR53 ISD11Q6Q560 94 aa-2.43□□□□□ -2.8
snR53snR53 QDR3P38227 689 aa-2.44□□□□□ -2.8
snR53snR53 PET8P38921 284 aa-2.44□□□□□ -2.8
snR53snR53 SPO22P40511 975 aa-2.44□□□□□ -2.8
snR53snR53 AGE2P40529 298 aa-2.44□□□□□ -2.8
snR53snR53 KTI12P34253 313 aaKnown RBP-2.45□□□□□ -2.8
snR53snR53 TPO5P36029 618 aa-2.45□□□□□ -2.8
snR53snR53 YEA4P40004 342 aa-2.45□□□□□ -2.8
snR53snR53 NDE1P40215 560 aa-2.45□□□□□ -2.8
snR53snR53 ECM18Q04623 453 aa-2.45□□□□□ -2.8
snR53snR53 MSA1Q08471 629 aa-2.45□□□□□ -2.8
snR53snR53 DCI1Q08558 271 aa-2.45□□□□□ -2.8
snR53snR53 YPL278CQ08990 100 aa-2.45□□□□□ -2.8
snR53snR53 YEL009C-AA0A023PZF2 135 aa-2.46□□□□□ -2.8
snR53snR53 MRPL6P32904 214 aa-2.46□□□□□ -2.8
snR53snR53 ARN2P38724 620 aa-2.46□□□□□ -2.8
snR53snR53 DOG1P38774 246 aa-2.46□□□□□ -2.8
snR53snR53 BIG1P38813 335 aa-2.46□□□□□ -2.8
snR53snR53 AVT6P40074 448 aa-2.46□□□□□ -2.8
snR53snR53 SWT21P53873 357 aaPredicted RBP-2.46□□□□□ -2.8
snR53snR53 AKR2Q12013 749 aa-2.46□□□□□ -2.8
snR53snR53 RRG1Q12167 365 aaPredicted RBP-2.46□□□□□ -2.8
snR53snR53 CLC1P17891 233 aa-2.47□□□□□ -2.8
snR53snR53 CCA1P21269 546 aa-2.47□□□□□ -2.8
snR53snR53 SPT8P38915 602 aa-2.47□□□□□ -2.8
snR53snR53 LIF1P53150 421 aa-2.47□□□□□ -2.8
snR53snR53 SEC13Q04491 297 aaKnown RBP-2.47□□□□□ -2.8
snR53snR53 YPL245WQ12179 454 aaKnown RBP-2.47□□□□□ -2.8
snR53snR53 ENT1Q12518 454 aa-2.47□□□□□ -2.8
snR53snR53 SEM1O94742 89 aa-2.48□□□□□ -2.81
snR53snR53 MDH3P32419 343 aaKnown RBP RIP-Chip data-2.48□□□□□ -2.81not detected
snR53snR53 RIM1P32445 135 aaKnown RBP-2.48□□□□□ -2.81
snR53snR53 MRPS5P33759 307 aa-2.48□□□□□ -2.81
snR53snR53 SMF1P38925 575 aa-2.48□□□□□ -2.81
snR53snR53 YFL064CP43540 174 aa-2.48□□□□□ -2.81
snR53snR53 TAD2P47058 250 aa-2.48□□□□□ -2.81
snR53snR53 PRP24P49960 444 aaKnown RBP-2.48□□□□□ -2.81
snR53snR53 ACL4Q03771 387 aa-2.48□□□□□ -2.81
snR53snR53 SWI3P32591 825 aa-2.49□□□□□ -2.81
snR53snR53 MED2Q12124 431 aa-2.49□□□□□ -2.81
snR53snR53 YCR025CP25352 136 aa-2.5□□□□□ -2.81
snR53snR53 IMP1P28627 190 aa-2.5□□□□□ -2.81
snR53snR53 ERV15P38312 142 aa-2.5□□□□□ -2.81
snR53snR53 MRPL19P53875 158 aa-2.5□□□□□ -2.81
snR53snR53 BUD2P33314 1104 aa-2.51□□□□□ -2.81
snR53snR53 VID27P40157 782 aa-2.51□□□□□ -2.81
snR53snR53 PEX10Q05568 337 aa-2.51□□□□□ -2.81
snR53snR53 YBL112CQ3E7Y4 105 aa-2.51□□□□□ -2.81
snR53snR53 SPS100P13130 326 aa-2.52□□□□□ -2.81
snR53snR53 PHO91P27514 894 aa-2.52□□□□□ -2.81
snR53snR53 MDL1P33310 695 aa-2.52□□□□□ -2.81
snR53snR53 YKE4P40544 346 aa-2.52□□□□□ -2.81
snR53snR53 LST7P53237 242 aa-2.52□□□□□ -2.81
snR53snR53 RTT102P53330 157 aa-2.52□□□□□ -2.81
snR53snR53 RPT4P53549 437 aaKnown RBP-2.52□□□□□ -2.81
snR53snR53 YDR341CQ05506 607 aaKnown RBP-2.52□□□□□ -2.81
snR53snR53 GRX6Q12438 231 aa-2.52□□□□□ -2.81
snR53snR53 RPS3P05750 240 aaKnown RBP-2.53□□□□□ -2.81
snR53snR53 BMH1P29311 267 aaKnown RBP-2.53□□□□□ -2.81
snR53snR53 TOM22P49334 152 aa-2.53□□□□□ -2.81
snR53snR53 MGA1P53050 456 aa-2.53□□□□□ -2.81
snR53snR53 YNL143CP53908 130 aa-2.53□□□□□ -2.81
snR53snR53 NOP6Q07623 225 aaKnown RBP-2.53□□□□□ -2.81
snR53snR53 AAD15Q08361 143 aa-2.53□□□□□ -2.81
snR53snR53 FSH3Q99369 266 aa-2.53□□□□□ -2.81
snR53snR53 MRPL3P36516 390 aa-2.54□□□□□ -2.82
snR53snR53 FUI1P38196 639 aa-2.54□□□□□ -2.82
snR53snR53 YFL065CP43539 102 aa-2.54□□□□□ -2.82
snR53snR53 DBP6P53734 629 aaKnown RBP-2.54□□□□□ -2.82
snR53snR53 SUB1P54000 292 aaKnown RBP-2.54□□□□□ -2.82
snR53snR53 YPL039WQ03080 316 aa-2.54□□□□□ -2.82
snR53snR53 AIM33Q04516 312 aa-2.54□□□□□ -2.82
snR53snR53 RAD1P06777 1100 aa-2.55□□□□□ -2.82
snR53snR53 UTR1P21373 530 aa-2.55□□□□□ -2.82
snR53snR53 OAC1P32332 324 aa-2.55□□□□□ -2.82
snR53snR53 ZRT1P32804 376 aa-2.55□□□□□ -2.82
snR53snR53 VAM7P32912 316 aa-2.55□□□□□ -2.82
snR53snR53 SAS3P34218 831 aa-2.55□□□□□ -2.82
snR53snR53 TMA19P35691 167 aaKnown RBP-2.55□□□□□ -2.82
snR53snR53 GPX1P36014 167 aa-2.55□□□□□ -2.82
snR53snR53 ATG7P38862 630 aa-2.55□□□□□ -2.82
snR53snR53 MPP6P53725 186 aaPredicted RBP-2.55□□□□□ -2.82
snR53snR53 ARX1Q03862 593 aaKnown RBP-2.55□□□□□ -2.82
snR53snR53 DTD1Q07648 150 aaKnown RBP-2.55□□□□□ -2.82
snR53snR53 USB1Q12208 290 aaKnown RBP-2.55□□□□□ -2.82
snR53snR53 OSM1P21375 501 aaKnown RBP-2.56□□□□□ -2.82
snR53snR53 DPB2P24482 689 aaPredicted RBP-2.56□□□□□ -2.82
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms