RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SKI7Q08491 747 aaPredicted RBP3.1□□□□□ -1.91
RPA43YOR340C MUM3Q08750 479 aa3.1□□□□□ -1.91
RPA43YOR340C YOR114WQ12219 294 aa3.1□□□□□ -1.91
RPA43YOR340C GLE1Q12315 538 aa3.1□□□□□ -1.91
RPA43YOR340C PSY3Q12318 242 aa3.1□□□□□ -1.91
RPA43YOR340C NCA2Q12374 616 aa3.1□□□□□ -1.91
RPA43YOR340C HEM2P05373 342 aa3.09□□□□□ -1.91
RPA43YOR340C RPB4P20433 221 aaPredicted RBP3.09□□□□□ -1.91
RPA43YOR340C RNA14P25298 677 aaKnown RBP3.09□□□□□ -1.91
RPA43YOR340C TRX3P25372 127 aa3.09□□□□□ -1.91
RPA43YOR340C ITR1P30605 584 aa3.09□□□□□ -1.91
RPA43YOR340C TOA1P32773 286 aa3.09□□□□□ -1.91
RPA43YOR340C YBR062CP38239 180 aa3.09□□□□□ -1.91
RPA43YOR340C LIN1P38852 340 aaPredicted RBP3.09□□□□□ -1.91
RPA43YOR340C YER079WP40052 210 aaKnown RBP3.09□□□□□ -1.91
RPA43YOR340C RPR2P40571 144 aa3.09□□□□□ -1.91
RPA43YOR340C MDE1P47095 244 aa3.09□□□□□ -1.91
RPA43YOR340C MDM34P53083 459 aa3.09□□□□□ -1.91
RPA43YOR340C YNR048WP53740 393 aa3.09□□□□□ -1.91
RPA43YOR340C STD1Q02794 444 aa3.09□□□□□ -1.91
RPA43YOR340C NHP10Q03435 203 aa3.09□□□□□ -1.91
RPA43YOR340C YMR111CQ04461 462 aaPredicted RBP3.09□□□□□ -1.91
RPA43YOR340C BCH1Q05029 724 aa3.09□□□□□ -1.91
RPA43YOR340C ERP1Q05359 219 aaKnown RBP3.09□□□□□ -1.91
RPA43YOR340C SEC10Q06245 871 aa3.09□□□□□ -1.91
RPA43YOR340C TIM18Q08749 192 aa3.09□□□□□ -1.91
RPA43YOR340C YPL199CQ08954 240 aa3.09□□□□□ -1.91
RPA43YOR340C SRL2Q12020 392 aa3.09□□□□□ -1.91
RPA43YOR340C AYT1Q12226 474 aa3.09□□□□□ -1.91
RPA43YOR340C YPR011CQ12251 326 aa3.09□□□□□ -1.91
RPA43YOR340C RRP42Q12277 265 aaPredicted RBP3.09□□□□□ -1.91
RPA43YOR340C SET6Q12529 373 aa3.09□□□□□ -1.91
RPA43YOR340C SRN2Q99176 213 aa3.09□□□□□ -1.91
RPA43YOR340C MDM35O60200 86 aa3.08□□□□□ -1.92
RPA43YOR340C PHO2P07269 559 aa3.08□□□□□ -1.92
RPA43YOR340C ATR1P13090 542 aa3.08□□□□□ -1.92
RPA43YOR340C CHA1P25379 360 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C MXR2P25566 168 aa3.08□□□□□ -1.92
RPA43YOR340C BUB2P26448 306 aaPredicted RBP3.08□□□□□ -1.92
RPA43YOR340C FAA1P30624 700 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C RPS0AP32905 252 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C CBF5P33322 483 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
RPA43YOR340C RPS1AP33442 255 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C PTC1P35182 281 aa3.08□□□□□ -1.92
RPA43YOR340C MDM31P38880 579 aa3.08□□□□□ -1.92
RPA43YOR340C MST28P39552 234 aa3.08□□□□□ -1.92
RPA43YOR340C NAS2P40555 220 aa3.08□□□□□ -1.92
RPA43YOR340C PAC11P40960 533 aa3.08□□□□□ -1.92
RPA43YOR340C SSN8P47821 323 aa3.08□□□□□ -1.92
RPA43YOR340C BIO3P50277 480 aa3.08□□□□□ -1.92
RPA43YOR340C EFM5P53200 248 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C YGR266WP53326 701 aa3.08□□□□□ -1.92
RPA43YOR340C PDR16P53860 351 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C LSM3P57743 89 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C MMT1Q03218 510 aa3.08□□□□□ -1.92
RPA43YOR340C TVP15Q03860 143 aa3.08□□□□□ -1.92
RPA43YOR340C IPK1Q06667 281 aa3.08□□□□□ -1.92
RPA43YOR340C YLR030WQ07967 263 aa3.08□□□□□ -1.92
RPA43YOR340C YOL019WQ08157 551 aa3.08□□□□□ -1.92
RPA43YOR340C MMT2Q08970 484 aa3.08□□□□□ -1.92
RPA43YOR340C SLF1Q12034 447 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C PPT2Q12036 173 aa3.08□□□□□ -1.92
RPA43YOR340C RUD3Q12234 484 aaKnown RBP3.08□□□□□ -1.92
RPA43YOR340C RNH203Q12338 110 aa3.08□□□□□ -1.92
RPA43YOR340C NOT5Q12514 560 aaPredicted RBP3.08□□□□□ -1.92
RPA43YOR340C OPI3P05375 206 aa3.07□□□□□ -1.92
RPA43YOR340C COS2P0CX12 379 aa3.07□□□□□ -1.92
RPA43YOR340C COS3P0CX13 379 aa3.07□□□□□ -1.92
RPA43YOR340C ADE1P27616 306 aa3.07□□□□□ -1.92
RPA43YOR340C YER034WP40022 185 aaKnown RBP3.07□□□□□ -1.92
RPA43YOR340C YIL086CP40503 102 aa3.07□□□□□ -1.92
RPA43YOR340C COS4P43542 379 aa3.07□□□□□ -1.92
RPA43YOR340C IBA57P47158 497 aa3.07□□□□□ -1.92
RPA43YOR340C RCF2P53721 224 aa3.07□□□□□ -1.92
RPA43YOR340C CAF40P53829 373 aa3.07□□□□□ -1.92
RPA43YOR340C YNL260CP53846 198 aa3.07□□□□□ -1.92
RPA43YOR340C SLM2P53955 656 aa3.07□□□□□ -1.92
RPA43YOR340C SED5Q01590 340 aa3.07□□□□□ -1.92
RPA43YOR340C MRS2Q01926 470 aa3.07□□□□□ -1.92
RPA43YOR340C MET31Q03081 177 aa3.07□□□□□ -1.92
RPA43YOR340C RTT103Q05543 409 aa3.07□□□□□ -1.92
RPA43YOR340C FAR10Q06001 478 aa3.07□□□□□ -1.92
RPA43YOR340C RRP9Q06506 573 aaKnown RBP3.07□□□□□ -1.92
RPA43YOR340C ESA1Q08649 445 aa3.07□□□□□ -1.92
RPA43YOR340C YKL018C-AQ3E7A7 99 aa3.07□□□□□ -1.92
RPA43YOR340C YMR230W-AQ3E7B5 62 aa3.07□□□□□ -1.92
RPA43YOR340C PRP8P33334 2413 aaKnown RBP3.07□□□□□ -1.92
RPA43YOR340C STF1P01098 86 aa3.06□□□□□ -1.92
RPA43YOR340C BCY1P07278 416 aaKnown RBP3.06□□□□□ -1.92
RPA43YOR340C RSR1P13856 272 aa3.06□□□□□ -1.92
RPA43YOR340C SLM5P25345 492 aaKnown RBP3.06□□□□□ -1.92
RPA43YOR340C LOS1P33418 1100 aaPredicted RBP3.06□□□□□ -1.92
RPA43YOR340C TAF14P35189 244 aa3.06□□□□□ -1.92
RPA43YOR340C BMT2P38278 337 aa3.06□□□□□ -1.92
RPA43YOR340C ATG7P38862 630 aa3.06□□□□□ -1.92
RPA43YOR340C YHR177WP38867 453 aa3.06□□□□□ -1.92
RPA43YOR340C APQ12P40532 138 aa3.06□□□□□ -1.92
RPA43YOR340C OST1P41543 476 aaKnown RBP3.06□□□□□ -1.92
RPA43YOR340C RPL10P41805 221 aaKnown RBP3.06□□□□□ -1.92
RPA43YOR340C PRM10P42946 383 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms