RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W TAD2P47058 250 aa3.17□□□□□ -1.9
HSH49YOR319W NRM1P53718 249 aa3.17□□□□□ -1.9
HSH49YOR319W ALG11P53954 548 aaKnown RBP3.17□□□□□ -1.9
HSH49YOR319W LIP2Q06005 328 aa3.17□□□□□ -1.9
HSH49YOR319W BSC6Q08280 497 aa3.17□□□□□ -1.9
HSH49YOR319W SGT2Q12118 346 aaKnown RBP3.17□□□□□ -1.9
HSH49YOR319W TFC7Q12415 435 aa3.17□□□□□ -1.9
HSH49YOR319W LAG2Q92325 660 aa3.17□□□□□ -1.9
HSH49YOR319W HIS1P00498 297 aaKnown RBP3.16□□□□□ -1.9
HSH49YOR319W MRP1P10662 321 aaKnown RBP3.16□□□□□ -1.9
HSH49YOR319W MRPL20P22354 195 aaPredicted RBP3.16□□□□□ -1.9
HSH49YOR319W PRS1P32895 427 aaKnown RBP3.16□□□□□ -1.9
HSH49YOR319W CSE1P33307 960 aa3.16□□□□□ -1.9
HSH49YOR319W YKL187CP34231 750 aa3.16□□□□□ -1.9
HSH49YOR319W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
HSH49YOR319W PRS4P38063 326 aaPredicted RBP3.16□□□□□ -1.9
HSH49YOR319W SWD3P38123 315 aa3.16□□□□□ -1.9
HSH49YOR319W YBR241CP38142 488 aa3.16□□□□□ -1.9
HSH49YOR319W SHE3P38272 425 aaKnown RBP3.16□□□□□ -1.9
HSH49YOR319W WSC4P38739 605 aa3.16□□□□□ -1.9
HSH49YOR319W PET8P38921 284 aa3.16□□□□□ -1.9
HSH49YOR319W YPT32P51996 222 aaKnown RBP3.16□□□□□ -1.9
HSH49YOR319W TPC1P53257 314 aa3.16□□□□□ -1.9
HSH49YOR319W OST6Q03723 332 aa3.16□□□□□ -1.9
HSH49YOR319W GMC1Q04399 608 aa3.16□□□□□ -1.9
HSH49YOR319W HRT3Q12347 344 aa3.16□□□□□ -1.9
HSH49YOR319W WTM1Q12363 437 aaKnown RBP3.16□□□□□ -1.9
HSH49YOR319W ATG31Q12421 196 aa3.16□□□□□ -1.9
HSH49YOR319W BGL2P15703 313 aaKnown RBP3.15□□□□□ -1.91
HSH49YOR319W MRPL6P32904 214 aa3.15□□□□□ -1.91
HSH49YOR319W SPT4P32914 102 aaPredicted RBP3.15□□□□□ -1.91
HSH49YOR319W MSN4P33749 630 aa3.15□□□□□ -1.91
HSH49YOR319W TCD1P38756 429 aa3.15□□□□□ -1.91
HSH49YOR319W YER085CP40058 173 aa3.15□□□□□ -1.91
HSH49YOR319W IGD1P43598 195 aa3.15□□□□□ -1.91
HSH49YOR319W SDS23P53172 527 aa3.15□□□□□ -1.91
HSH49YOR319W TIM21P53220 239 aa3.15□□□□□ -1.91
HSH49YOR319W MRPL50P53724 139 aa3.15□□□□□ -1.91
HSH49YOR319W MNT4P53745 580 aa3.15□□□□□ -1.91
HSH49YOR319W TRM44Q02648 567 aaKnown RBP3.15□□□□□ -1.91
HSH49YOR319W YLR283WQ05867 314 aa3.15□□□□□ -1.91
HSH49YOR319W SDO1Q07953 250 aaKnown RBP3.15□□□□□ -1.91
HSH49YOR319W MMT2Q08970 484 aa3.15□□□□□ -1.91
HSH49YOR319W VIK1Q12045 647 aa3.15□□□□□ -1.91
HSH49YOR319W RPL21BQ12672 160 aaKnown RBP3.15□□□□□ -1.91
HSH49YOR319W BI3Q9ZZW7 517 aa3.15□□□□□ -1.91
HSH49YOR319W CFT1Q06632 1357 aaKnown RBP3.14□□□□□ -1.91
HSH49YOR319W CDC42P19073 191 aa3.14□□□□□ -1.91
HSH49YOR319W YCR016WP25617 290 aaKnown RBP3.14□□□□□ -1.91
HSH49YOR319W SUA5P32579 426 aa3.14□□□□□ -1.91
HSH49YOR319W BMH2P34730 273 aaKnown RBP3.14□□□□□ -1.91
HSH49YOR319W BIG1P38813 335 aa3.14□□□□□ -1.91
HSH49YOR319W SHC1P39000 512 aa3.14□□□□□ -1.91
HSH49YOR319W RTR1P40084 226 aaPredicted RBP3.14□□□□□ -1.91
HSH49YOR319W STB1P42845 420 aa3.14□□□□□ -1.91
HSH49YOR319W YNR066CP53752 436 aa3.14□□□□□ -1.91
HSH49YOR319W KTR6P54070 446 aa3.14□□□□□ -1.91
HSH49YOR319W TPS1Q00764 495 aaKnown RBP3.14□□□□□ -1.91
HSH49YOR319W PEX30Q06169 523 aa3.14□□□□□ -1.91
HSH49YOR319W TAZ1Q06510 381 aa3.14□□□□□ -1.91
HSH49YOR319W PAM18Q07914 168 aa3.14□□□□□ -1.91
HSH49YOR319W YOR376WQ08900 122 aa3.14□□□□□ -1.91
HSH49YOR319W YOR029WQ12243 111 aa3.14□□□□□ -1.91
HSH49YOR319W YBL111CQ3E7Y5 667 aa3.14□□□□□ -1.91
HSH49YOR319W REV1P12689 985 aa3.13□□□□□ -1.91
HSH49YOR319W RPB4P20433 221 aaPredicted RBP3.13□□□□□ -1.91
HSH49YOR319W POF1P25576 258 aa3.13□□□□□ -1.91
HSH49YOR319W KRE6P32486 720 aa3.13□□□□□ -1.91
HSH49YOR319W SRB4P32569 687 aa3.13□□□□□ -1.91
HSH49YOR319W CYM1P32898 989 aa3.13□□□□□ -1.91
HSH49YOR319W ALD5P40047 520 aaKnown RBP3.13□□□□□ -1.91
HSH49YOR319W HIT1P46973 164 aa3.13□□□□□ -1.91
HSH49YOR319W IBA57P47158 497 aa3.13□□□□□ -1.91
HSH49YOR319W YNL040WP53960 456 aaPredicted RBP3.13□□□□□ -1.91
HSH49YOR319W YDR115WQ04598 105 aa3.13□□□□□ -1.91
HSH49YOR319W DPP1Q05521 289 aa3.13□□□□□ -1.91
HSH49YOR319W SFH1Q06168 426 aa3.13□□□□□ -1.91
HSH49YOR319W CTR3Q06686 241 aa3.13□□□□□ -1.91
HSH49YOR319W MIM1Q08176 113 aa3.13□□□□□ -1.91
HSH49YOR319W YOR114WQ12219 294 aa3.13□□□□□ -1.91
HSH49YOR319W AEP1P32493 518 aa3.12□□□□□ -1.91
HSH49YOR319W PRS2P38620 318 aaKnown RBP3.12□□□□□ -1.91
HSH49YOR319W VAB2P40003 282 aa3.12□□□□□ -1.91
HSH49YOR319W ASG7P46993 209 aa3.12□□□□□ -1.91
HSH49YOR319W SDT1P53078 280 aa3.12□□□□□ -1.91
HSH49YOR319W TPN1P53099 579 aa3.12□□□□□ -1.91
HSH49YOR319W RNY1Q02933 434 aaKnown RBP3.12□□□□□ -1.91
HSH49YOR319W MRX11Q03079 207 aa3.12□□□□□ -1.91
HSH49YOR319W ADD37Q03233 198 aa3.12□□□□□ -1.91
HSH49YOR319W YML018CQ03730 393 aa3.12□□□□□ -1.91
HSH49YOR319W KRE28Q04431 385 aa3.12□□□□□ -1.91
HSH49YOR319W TAF9Q05027 157 aa3.12□□□□□ -1.91
HSH49YOR319W SRO7Q12038 1033 aa3.12□□□□□ -1.91
HSH49YOR319W PER33Q12144 273 aa3.12□□□□□ -1.91
HSH49YOR319W MSH5Q12175 901 aa3.12□□□□□ -1.91
HSH49YOR319W RPS3P05750 240 aaKnown RBP3.11□□□□□ -1.91
HSH49YOR319W ASP3-2P0CX77 362 aa3.11□□□□□ -1.91
HSH49YOR319W ASP3-3P0CX78 362 aa3.11□□□□□ -1.91
HSH49YOR319W ASP3-4P0CX79 362 aa3.11□□□□□ -1.91
HSH49YOR319W ASP3-1P0CZ17 362 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms