RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C YDR262WQ12331 272 aa2.08□□□□□ -2.08
SHE4YOR035C FKS3Q04952 1785 aa2.08□□□□□ -2.08
SHE4YOR035C RAD9P14737 1309 aa2.08□□□□□ -2.08
SHE4YOR035C ROM2P51862 1356 aaKnown RBP2.08□□□□□ -2.08
SHE4YOR035C GCN1P33892 2672 aaKnown RBP2.08□□□□□ -2.08
SHE4YOR035C ITR2P30606 609 aa2.08□□□□□ -2.08
SHE4YOR035C VMA5P31412 392 aaKnown RBP2.08□□□□□ -2.08
SHE4YOR035C MEI5P32489 222 aa2.08□□□□□ -2.08
SHE4YOR035C NAS2P40555 220 aa2.08□□□□□ -2.08
SHE4YOR035C TPC1P53257 314 aa2.08□□□□□ -2.08
SHE4YOR035C SPH1Q06160 661 aa2.08□□□□□ -2.08
SHE4YOR035C PGC1Q08959 321 aa2.08□□□□□ -2.08
SHE4YOR035C FAB1P34756 2278 aa2.07□□□□□ -2.08
SHE4YOR035C CBF5P33322 483 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SHE4YOR035C TRR2P38816 342 aa2.07□□□□□ -2.08
SHE4YOR035C BDH1P39714 382 aa2.07□□□□□ -2.08
SHE4YOR035C SHE4P51534 789 aa2.07□□□□□ -2.08
SHE4YOR035C YGR168CP53293 376 aa2.07□□□□□ -2.08
SHE4YOR035C INP2Q03824 705 aa2.07□□□□□ -2.08
SHE4YOR035C YPR195CQ06594 109 aa2.07□□□□□ -2.08
SHE4YOR035C REP1P03871 373 aa2.07□□□□□ -2.08
SHE4YOR035C CKA2P19454 339 aa2.07□□□□□ -2.08
SHE4YOR035C COX10P21592 462 aa2.07□□□□□ -2.08
SHE4YOR035C CYM1P32898 989 aa2.07□□□□□ -2.08
SHE4YOR035C PRY2P36110 329 aa2.07□□□□□ -2.08
SHE4YOR035C RFT1P38206 574 aaPredicted RBP2.07□□□□□ -2.08
SHE4YOR035C RVB1Q03940 463 aaKnown RBP2.07□□□□□ -2.08
SHE4YOR035C APC4Q04601 652 aa2.07□□□□□ -2.08
SHE4YOR035C YDL211CQ12121 372 aa2.07□□□□□ -2.08
SHE4YOR035C GAL3P13045 520 aa2.06□□□□□ -2.08
SHE4YOR035C TRX1P22217 103 aaKnown RBP2.06□□□□□ -2.08
SHE4YOR035C FRM2P37261 193 aa2.06□□□□□ -2.08
SHE4YOR035C FMP48P53233 369 aa2.06□□□□□ -2.08
SHE4YOR035C YMR244WQ04018 355 aa2.06□□□□□ -2.08
SHE4YOR035C DTD1Q07648 150 aaKnown RBP2.06□□□□□ -2.08
SHE4YOR035C RDL2Q08742 149 aaKnown RBP2.06□□□□□ -2.08
SHE4YOR035C SAL1D6W196 494 aa2.06□□□□□ -2.08
SHE4YOR035C ACB1P31787 87 aa2.06□□□□□ -2.08
SHE4YOR035C ZRT3P34240 503 aa2.06□□□□□ -2.08
SHE4YOR035C AST1P35183 429 aa2.06□□□□□ -2.08
SHE4YOR035C MRX9Q07349 420 aaKnown RBP2.06□□□□□ -2.08
SHE4YOR035C YPS3Q12303 508 aa2.06□□□□□ -2.08
SHE4YOR035C CTM1P38818 585 aa2.05□□□□□ -2.08
SHE4YOR035C RPL18AP0CX49 186 aaKnown RBP2.05□□□□□ -2.08
SHE4YOR035C RPL18BP0CX50 186 aaKnown RBP2.05□□□□□ -2.08
SHE4YOR035C SRB2P34162 210 aa2.05□□□□□ -2.08
SHE4YOR035C YMR262WP38430 313 aa2.05□□□□□ -2.08
SHE4YOR035C TPM1P17536 199 aaKnown RBP2.04□□□□□ -2.08
SHE4YOR035C RRG9P40156 214 aa2.04□□□□□ -2.08
SHE4YOR035C ZRG17P53735 605 aa2.04□□□□□ -2.08
SHE4YOR035C STE23Q06010 1027 aa2.04□□□□□ -2.08
SHE4YOR035C PRM4Q12498 284 aa2.04□□□□□ -2.08
SHE4YOR035C DFM1Q12743 341 aaKnown RBP2.04□□□□□ -2.08
SHE4YOR035C YRF1-3P0CX14 1859 aa2.04□□□□□ -2.08
SHE4YOR035C YRF1-7P0CX15 1859 aa2.04□□□□□ -2.08
SHE4YOR035C YRF1-6P53819 1859 aa2.04□□□□□ -2.08
SHE4YOR035C CDC37P06101 506 aaKnown RBP2.03□□□□□ -2.08
SHE4YOR035C VMA2P16140 517 aaKnown RBP2.03□□□□□ -2.08
SHE4YOR035C ERD1P16151 362 aa2.03□□□□□ -2.08
SHE4YOR035C YPS1P32329 569 aa2.03□□□□□ -2.08
SHE4YOR035C YKL187CP34231 750 aa2.03□□□□□ -2.08
SHE4YOR035C RCK1P38622 512 aa2.03□□□□□ -2.08
SHE4YOR035C DSE1P40077 573 aa2.03□□□□□ -2.08
SHE4YOR035C YIL059CP40520 121 aa2.03□□□□□ -2.08
SHE4YOR035C YIL054WP40524 105 aa2.03□□□□□ -2.08
SHE4YOR035C MIC19P43594 170 aa2.03□□□□□ -2.08
SHE4YOR035C PMT4P46971 762 aa2.03□□□□□ -2.08
SHE4YOR035C ASG7P46993 209 aa2.03□□□□□ -2.08
SHE4YOR035C SDS23P53172 527 aa2.03□□□□□ -2.08
SHE4YOR035C CAX4P53223 239 aa2.03□□□□□ -2.08
SHE4YOR035C AGA2P32781 87 aa2.03□□□□□ -2.08
SHE4YOR035C END3P39013 349 aa2.03□□□□□ -2.08
SHE4YOR035C GMC1Q04399 608 aa2.03□□□□□ -2.08
SHE4YOR035C YLR012CQ07927 99 aa2.03□□□□□ -2.08
SHE4YOR035C MIM1Q08176 113 aa2.03□□□□□ -2.08
SHE4YOR035C KRE5P22023 1365 aa2.03□□□□□ -2.09
SHE4YOR035C CPT1P17898 393 aa2.02□□□□□ -2.09
SHE4YOR035C MRPL20P22354 195 aaPredicted RBP2.02□□□□□ -2.09
SHE4YOR035C AIM20P40451 204 aa2.02□□□□□ -2.09
SHE4YOR035C UTP25P40498 721 aaKnown RBP2.02□□□□□ -2.09
SHE4YOR035C CPR7P47103 393 aa2.02□□□□□ -2.09
SHE4YOR035C YGL118CP53132 145 aa2.02□□□□□ -2.09
SHE4YOR035C SMD1Q02260 146 aaPredicted RBP2.02□□□□□ -2.09
SHE4YOR035C ECM19Q06011 112 aa2.02□□□□□ -2.09
SHE4YOR035C SAM4Q08985 325 aaKnown RBP2.02□□□□□ -2.09
SHE4YOR035C APC1P53886 1748 aa2.02□□□□□ -2.09
SHE4YOR035C CUP2P15315 225 aa2.02□□□□□ -2.09
SHE4YOR035C SLM1P40485 686 aa2.02□□□□□ -2.09
SHE4YOR035C IRC4Q03036 179 aa2.02□□□□□ -2.09
SHE4YOR035C YPL245WQ12179 454 aaKnown RBP2.02□□□□□ -2.09
SHE4YOR035C RFM1Q12192 310 aa2.02□□□□□ -2.09
SHE4YOR035C NUP192P47054 1683 aa2.01□□□□□ -2.09
SHE4YOR035C ZRT1P32804 376 aa2.01□□□□□ -2.09
SHE4YOR035C BUD2P33314 1104 aa2.01□□□□□ -2.09
SHE4YOR035C PET8P38921 284 aa2.01□□□□□ -2.09
SHE4YOR035C YPL080CQ02826 108 aa2.01□□□□□ -2.09
SHE4YOR035C YLR297WQ05899 129 aa2.01□□□□□ -2.09
SHE4YOR035C TFC7Q12415 435 aa2.01□□□□□ -2.09
SHE4YOR035C YPR1Q12458 312 aa2.01□□□□□ -2.09
SHE4YOR035C YDR034W-BQ6Q5X2 51 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms