RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C NKP2Q06162 153 aa2.63□□□□□ -1.99
YMR046CYMR046C YLR177WQ06251 628 aa2.63□□□□□ -1.99
YMR046CYMR046C SLF1Q12034 447 aaKnown RBP2.63□□□□□ -1.99
YMR046CYMR046C YPR1Q12458 312 aa2.63□□□□□ -1.99
YMR046CYMR046C FOL3Q12676 427 aaPredicted RBP2.63□□□□□ -1.99
YMR046CYMR046C PUT4P15380 627 aa2.62□□□□□ -1.99
YMR046CYMR046C UGA1P17649 471 aa2.62□□□□□ -1.99
YMR046CYMR046C ICL1P28240 557 aaPredicted RBP2.62□□□□□ -1.99
YMR046CYMR046C SOL2P37262 315 aa2.62□□□□□ -1.99
YMR046CYMR046C SHE1P38200 338 aa2.62□□□□□ -1.99
YMR046CYMR046C SMF2P38778 549 aa2.62□□□□□ -1.99
YMR046CYMR046C SHC1P39000 512 aa2.62□□□□□ -1.99
YMR046CYMR046C YFL040WP43562 540 aa2.62□□□□□ -1.99
YMR046CYMR046C YGR015CP53208 328 aa2.62□□□□□ -1.99
YMR046CYMR046C APC4Q04601 652 aa2.62□□□□□ -1.99
YMR046CYMR046C RPN8Q08723 338 aaKnown RBP2.62□□□□□ -1.99
YMR046CYMR046C SAL1D6W196 494 aa2.61□□□□□ -1.99
YMR046CYMR046C REP1P03871 373 aa2.61□□□□□ -1.99
YMR046CYMR046C GAL7P08431 366 aa2.61□□□□□ -1.99
YMR046CYMR046C RPL5P26321 297 aaKnown RBP2.61□□□□□ -1.99
YMR046CYMR046C MEI5P32489 222 aa2.61□□□□□ -1.99
YMR046CYMR046C RPC25P35718 212 aa2.61□□□□□ -1.99
YMR046CYMR046C FHL1P39521 936 aa2.61□□□□□ -1.99
YMR046CYMR046C RTT105P40063 208 aa2.61□□□□□ -1.99
YMR046CYMR046C YFH7P43591 353 aa2.61□□□□□ -1.99
YMR046CYMR046C GCD14P46959 383 aaPredicted RBP2.61□□□□□ -1.99
YMR046CYMR046C PMT4P46971 762 aa2.61□□□□□ -1.99
YMR046CYMR046C YJR054WP47114 497 aa2.61□□□□□ -1.99
YMR046CYMR046C YGL262WP53054 175 aa2.61□□□□□ -1.99
YMR046CYMR046C PNC1P53184 216 aaKnown RBP2.61□□□□□ -1.99
YMR046CYMR046C CDH1P53197 566 aa2.61□□□□□ -1.99
YMR046CYMR046C OKP1P53298 406 aa2.61□□□□□ -1.99
YMR046CYMR046C YDR115WQ04598 105 aa2.61□□□□□ -1.99
YMR046CYMR046C ERV41Q04651 352 aa2.61□□□□□ -1.99
YMR046CYMR046C YLR413WQ06689 675 aa2.61□□□□□ -1.99
YMR046CYMR046C YLR012CQ07927 99 aa2.61□□□□□ -1.99
YMR046CYMR046C RDL2Q08742 149 aaKnown RBP2.61□□□□□ -1.99
YMR046CYMR046C SAM4Q08985 325 aaKnown RBP2.61□□□□□ -1.99
YMR046CYMR046C TAF10Q12030 206 aa2.61□□□□□ -1.99
YMR046CYMR046C ADH1P00330 348 aaKnown RBP2.6□□□□□ -1.99
YMR046CYMR046C RPS14AP06367 137 aaKnown RBP2.6□□□□□ -1.99
YMR046CYMR046C CTA1P15202 515 aa2.6□□□□□ -1.99
YMR046CYMR046C OM45P16547 393 aa2.6□□□□□ -1.99
YMR046CYMR046C URA10P30402 227 aa2.6□□□□□ -1.99
YMR046CYMR046C RAD23P32628 398 aaKnown RBP2.6□□□□□ -1.99
YMR046CYMR046C DTR1P38125 572 aa2.6□□□□□ -1.99
YMR046CYMR046C SHE3P38272 425 aaKnown RBP2.6□□□□□ -1.99
YMR046CYMR046C YHR035WP38769 630 aa2.6□□□□□ -1.99
YMR046CYMR046C CHL4P38907 458 aa2.6□□□□□ -1.99
YMR046CYMR046C VPS45P38932 577 aa2.6□□□□□ -1.99
YMR046CYMR046C RPS14BP39516 138 aaKnown RBP2.6□□□□□ -1.99
YMR046CYMR046C COX16P47081 118 aa2.6□□□□□ -1.99
YMR046CYMR046C YGR018CP53211 109 aa2.6□□□□□ -1.99
YMR046CYMR046C RNH201P53942 307 aa2.6□□□□□ -1.99
YMR046CYMR046C KTR6P54070 446 aa2.6□□□□□ -1.99
YMR046CYMR046C IRC4Q03036 179 aa2.6□□□□□ -1.99
YMR046CYMR046C SCS7Q03529 384 aa2.6□□□□□ -1.99
YMR046CYMR046C VTI1Q04338 217 aa2.6□□□□□ -1.99
YMR046CYMR046C INM2Q05533 292 aa2.6□□□□□ -1.99
YMR046CYMR046C FAR10Q06001 478 aa2.6□□□□□ -1.99
YMR046CYMR046C BCP1Q06338 283 aa2.6□□□□□ -1.99
YMR046CYMR046C LDB17Q12342 491 aa2.6□□□□□ -1.99
YMR046CYMR046C PRM4Q12498 284 aa2.6□□□□□ -1.99
YMR046CYMR046C CBP6P07253 162 aaPredicted RBP2.59□□□□□ -2
YMR046CYMR046C PPQ1P32945 549 aa2.59□□□□□ -2
YMR046CYMR046C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
YMR046CYMR046C MID2P36027 376 aa2.59□□□□□ -2
YMR046CYMR046C YKL071WP36086 256 aa2.59□□□□□ -2
YMR046CYMR046C MRPL27P36526 146 aaPredicted RBP2.59□□□□□ -2
YMR046CYMR046C YBR241CP38142 488 aa2.59□□□□□ -2
YMR046CYMR046C PEX18P38855 283 aa2.59□□□□□ -2
YMR046CYMR046C SEO1P39709 593 aa2.59□□□□□ -2
YMR046CYMR046C PEX22P39718 180 aa2.59□□□□□ -2
YMR046CYMR046C GTO1P48239 356 aa2.59□□□□□ -2
YMR046CYMR046C BIO3P50277 480 aa2.59□□□□□ -2
YMR046CYMR046C BIO4P53630 237 aa2.59□□□□□ -2
YMR046CYMR046C TPS1Q00764 495 aaKnown RBP2.59□□□□□ -2
YMR046CYMR046C TRM44Q02648 567 aaKnown RBP2.59□□□□□ -2
YMR046CYMR046C VHS1Q03785 461 aa2.59□□□□□ -2
YMR046CYMR046C MCH1Q07376 486 aa2.59□□□□□ -2
YMR046CYMR046C DTD1Q07648 150 aaKnown RBP2.59□□□□□ -2
YMR046CYMR046C YOR376WQ08900 122 aa2.59□□□□□ -2
YMR046CYMR046C SIA1Q12212 622 aa2.59□□□□□ -2
YMR046CYMR046C MRPL23Q12487 163 aaPredicted RBP2.59□□□□□ -2
YMR046CYMR046C RPL21BQ12672 160 aaKnown RBP2.59□□□□□ -2
YMR046CYMR046C UTP10P42945 1769 aaKnown RBP2.59□□□□□ -2
YMR046CYMR046C ZRT1P32804 376 aa2.58□□□□□ -2
YMR046CYMR046C PDC2P32896 925 aa2.58□□□□□ -2
YMR046CYMR046C RIB7P33312 244 aa2.58□□□□□ -2
YMR046CYMR046C KTI12P34253 313 aaKnown RBP2.58□□□□□ -2
YMR046CYMR046C SPL2P38839 148 aa2.58□□□□□ -2
YMR046CYMR046C DSE1P40077 573 aa2.58□□□□□ -2
YMR046CYMR046C STB1P42845 420 aa2.58□□□□□ -2
YMR046CYMR046C YNL260CP53846 198 aa2.58□□□□□ -2
YMR046CYMR046C RPL21AQ02753 160 aaKnown RBP2.58□□□□□ -2
YMR046CYMR046C YPL080CQ02826 108 aa2.58□□□□□ -2
YMR046CYMR046C YMR111CQ04461 462 aaPredicted RBP2.58□□□□□ -2
YMR046CYMR046C MRX9Q07349 420 aaKnown RBP2.58□□□□□ -2
YMR046CYMR046C RRP36Q12481 300 aaPredicted RBP2.58□□□□□ -2
YMR046CYMR046C RAD7P06779 565 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms