RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C YOR029WQ12243 111 aa3.75□□□□□ -1.81
VPS71YML041C STE7P06784 515 aa3.74□□□□□ -1.81
VPS71YML041C TFS1P14306 219 aa3.74□□□□□ -1.81
VPS71YML041C GIT1P25346 518 aa3.74□□□□□ -1.81
VPS71YML041C SHC1P39000 512 aa3.74□□□□□ -1.81
VPS71YML041C AIM10P39965 576 aaKnown RBP3.74□□□□□ -1.81
VPS71YML041C GDS1P41913 522 aa3.74□□□□□ -1.81
VPS71YML041C BIR1P47134 954 aa3.74□□□□□ -1.81
VPS71YML041C TIS11P47977 285 aa3.74□□□□□ -1.81
VPS71YML041C SLT2Q00772 484 aa3.74□□□□□ -1.81
VPS71YML041C SKI8Q02793 397 aaPredicted RBP3.74□□□□□ -1.81
VPS71YML041C SCS7Q03529 384 aa3.74□□□□□ -1.81
VPS71YML041C VBA1Q04301 562 aa3.74□□□□□ -1.81
VPS71YML041C PRS2P38620 318 aaKnown RBP3.73□□□□□ -1.81
VPS71YML041C SIP3P38717 1229 aa3.73□□□□□ -1.81
VPS71YML041C ALD5P40047 520 aaKnown RBP3.73□□□□□ -1.81
VPS71YML041C RPL10P41805 221 aaKnown RBP3.73□□□□□ -1.81
VPS71YML041C YPT32P51996 222 aaKnown RBP3.73□□□□□ -1.81
VPS71YML041C KTR6P54070 446 aa3.73□□□□□ -1.81
VPS71YML041C TRM44Q02648 567 aaKnown RBP3.73□□□□□ -1.81
VPS71YML041C OST6Q03723 332 aa3.73□□□□□ -1.81
VPS71YML041C BNA7Q04066 261 aa3.73□□□□□ -1.81
VPS71YML041C FAR10Q06001 478 aa3.73□□□□□ -1.81
VPS71YML041C YLR446WQ06204 433 aa3.73□□□□□ -1.81
VPS71YML041C RRG7Q08774 242 aaPredicted RBP3.73□□□□□ -1.81
VPS71YML041C PER33Q12144 273 aa3.73□□□□□ -1.81
VPS71YML041C MSH5Q12175 901 aa3.73□□□□□ -1.81
VPS71YML041C HRT3Q12347 344 aa3.73□□□□□ -1.81
VPS71YML041C PRB1P09232 635 aa3.72□□□□□ -1.81
VPS71YML041C REV1P12689 985 aa3.72□□□□□ -1.81
VPS71YML041C RNA15P25299 296 aaPredicted RBP3.72□□□□□ -1.81
VPS71YML041C PPA2P28239 310 aa3.72□□□□□ -1.81
VPS71YML041C MRPL6P32904 214 aa3.72□□□□□ -1.81
VPS71YML041C OM14P38325 134 aa3.72□□□□□ -1.81
VPS71YML041C CHL4P38907 458 aa3.72□□□□□ -1.81
VPS71YML041C GAB1P41733 394 aa3.72□□□□□ -1.81
VPS71YML041C ASG7P46993 209 aa3.72□□□□□ -1.81
VPS71YML041C PRP38Q00723 242 aaPredicted RBP3.72□□□□□ -1.81
VPS71YML041C YDR209CQ03480 137 aa3.72□□□□□ -1.81
VPS71YML041C YET2Q04210 160 aa3.72□□□□□ -1.81
VPS71YML041C MYO5Q04439 1219 aaKnown RBP3.72□□□□□ -1.81
VPS71YML041C CTR3Q06686 241 aa3.72□□□□□ -1.81
VPS71YML041C CSM4Q08955 156 aa3.72□□□□□ -1.81
VPS71YML041C YPL245WQ12179 454 aaKnown RBP3.72□□□□□ -1.81
VPS71YML041C YBL111CQ3E7Y5 667 aa3.72□□□□□ -1.81
VPS71YML041C NCB2Q92317 146 aa3.72□□□□□ -1.81
VPS71YML041C MHP1P43638 1398 aa3.72□□□□□ -1.81
VPS71YML041C JIP3O13555 125 aa3.71□□□□□ -1.82
VPS71YML041C NHP6BP11633 99 aaKnown RBP3.71□□□□□ -1.82
VPS71YML041C TPS2P31688 896 aaKnown RBP3.71□□□□□ -1.82
VPS71YML041C MRX3P38172 270 aa3.71□□□□□ -1.82
VPS71YML041C MIG3P39943 394 aa3.71□□□□□ -1.82
VPS71YML041C OXA1P39952 402 aa3.71□□□□□ -1.82
VPS71YML041C VHT1P53241 593 aa3.71□□□□□ -1.82
VPS71YML041C NOP13P53883 403 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
VPS71YML041C MRPS17Q03246 237 aaPredicted RBP3.71□□□□□ -1.82
VPS71YML041C TAF9Q05027 157 aa3.71□□□□□ -1.82
VPS71YML041C SSQ1Q05931 657 aaPredicted RBP3.71□□□□□ -1.82
VPS71YML041C RPS14AP06367 137 aaKnown RBP3.7□□□□□ -1.82
VPS71YML041C SPS100P13130 326 aa3.7□□□□□ -1.82
VPS71YML041C PBN1P25580 416 aa3.7□□□□□ -1.82
VPS71YML041C IES6P32617 166 aa3.7□□□□□ -1.82
VPS71YML041C SPT4P32914 102 aaPredicted RBP3.7□□□□□ -1.82
VPS71YML041C SHE1P38200 338 aa3.7□□□□□ -1.82
VPS71YML041C LDB7P38210 180 aa3.7□□□□□ -1.82
VPS71YML041C YPC1P38298 316 aa3.7□□□□□ -1.82
VPS71YML041C SDS24P38314 527 aa3.7□□□□□ -1.82
VPS71YML041C RCK1P38622 512 aa3.7□□□□□ -1.82
VPS71YML041C EFM1P38732 585 aa3.7□□□□□ -1.82
VPS71YML041C RPS14BP39516 138 aaKnown RBP3.7□□□□□ -1.82
VPS71YML041C THO1P40040 218 aaKnown RBP3.7□□□□□ -1.82
VPS71YML041C UTP18P40362 594 aaPredicted RBP3.7□□□□□ -1.82
VPS71YML041C HIT1P46973 164 aa3.7□□□□□ -1.82
VPS71YML041C YJR012CP47087 207 aa3.7□□□□□ -1.82
VPS71YML041C YJR054WP47114 497 aa3.7□□□□□ -1.82
VPS71YML041C TPC1P53257 314 aa3.7□□□□□ -1.82
VPS71YML041C GMC1Q04399 608 aa3.7□□□□□ -1.82
VPS71YML041C SFH1Q06168 426 aa3.7□□□□□ -1.82
VPS71YML041C SME1Q12330 94 aaPredicted RBP3.7□□□□□ -1.82
VPS71YML041C LAG2Q92325 660 aa3.7□□□□□ -1.82
VPS71YML041C MATALPHA1P0CY06 175 aa3.69□□□□□ -1.82
VPS71YML041C HMLALPHA1P0CY07 175 aa3.69□□□□□ -1.82
VPS71YML041C COQ1P18900 473 aa3.69□□□□□ -1.82
VPS71YML041C AAT2P23542 418 aaKnown RBP3.69□□□□□ -1.82
VPS71YML041C POF1P25576 258 aa3.69□□□□□ -1.82
VPS71YML041C RPS5P26783 225 aaKnown RBP3.69□□□□□ -1.82
VPS71YML041C MAL32P38158 584 aa3.69□□□□□ -1.82
VPS71YML041C PFS1P38872 237 aa3.69□□□□□ -1.82
VPS71YML041C PEX22P39718 180 aa3.69□□□□□ -1.82
VPS71YML041C YRB1P41920 201 aaKnown RBP3.69□□□□□ -1.82
VPS71YML041C MAL12P53341 584 aa3.69□□□□□ -1.82
VPS71YML041C ENT5Q03769 411 aaKnown RBP3.69□□□□□ -1.82
VPS71YML041C SPO77Q06134 477 aa3.69□□□□□ -1.82
VPS71YML041C YLR177WQ06251 628 aa3.69□□□□□ -1.82
VPS71YML041C VIK1Q12045 647 aa3.69□□□□□ -1.82
VPS71YML041C GIS3Q12418 502 aa3.69□□□□□ -1.82
VPS71YML041C BI3Q9ZZW7 517 aa3.69□□□□□ -1.82
VPS71YML041C CDC36P06100 191 aaPredicted RBP3.68□□□□□ -1.82
VPS71YML041C ARG80P07249 177 aa3.68□□□□□ -1.82
VPS71YML041C MER1P16523 270 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms