RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W CDC42P19073 191 aa2.18□□□□□ -2.06
VPS38YLR360W MIG1P27705 504 aa2.18□□□□□ -2.06
VPS38YLR360W MED8P38304 223 aa2.18□□□□□ -2.06
VPS38YLR360W YIL012WP40551 113 aa2.18□□□□□ -2.06
VPS38YLR360W YGR266WP53326 701 aa2.18□□□□□ -2.06
VPS38YLR360W YPL113CQ02961 396 aa2.18□□□□□ -2.06
VPS38YLR360W CAB5Q03941 241 aa2.18□□□□□ -2.06
VPS38YLR360W PRE7P23724 241 aaKnown RBP2.17□□□□□ -2.06
VPS38YLR360W CDC13P32797 924 aaKnown RBP2.17□□□□□ -2.06
VPS38YLR360W GPX1P36014 167 aa2.17□□□□□ -2.06
VPS38YLR360W YBR062CP38239 180 aa2.17□□□□□ -2.06
VPS38YLR360W FET3P38993 636 aa2.17□□□□□ -2.06
VPS38YLR360W PES4P39684 611 aa2.17□□□□□ -2.06
VPS38YLR360W HSH155P49955 971 aaKnown RBP2.17□□□□□ -2.06
VPS38YLR360W OKP1P53298 406 aa2.17□□□□□ -2.06
VPS38YLR360W YLR297WQ05899 129 aa2.17□□□□□ -2.06
VPS38YLR360W YLR446WQ06204 433 aa2.17□□□□□ -2.06
VPS38YLR360W MRX4Q12467 430 aa2.17□□□□□ -2.06
VPS38YLR360W DCP1Q12517 231 aaPredicted RBP2.17□□□□□ -2.06
VPS38YLR360W SKI3P17883 1432 aaKnown RBP2.17□□□□□ -2.06
VPS38YLR360W YAK1P14680 807 aa2.17□□□□□ -2.06
VPS38YLR360W OPI1P21957 404 aa2.17□□□□□ -2.06
VPS38YLR360W RPL16BP26785 198 aaKnown RBP2.17□□□□□ -2.06
VPS38YLR360W MCH2P36032 473 aa2.17□□□□□ -2.06
VPS38YLR360W SWC5P38326 303 aa2.17□□□□□ -2.06
VPS38YLR360W MIX17Q03667 156 aa2.17□□□□□ -2.06
VPS38YLR360W YMR111CQ04461 462 aaPredicted RBP2.17□□□□□ -2.06
VPS38YLR360W PAA1Q12447 191 aaKnown RBP2.17□□□□□ -2.06
VPS38YLR360W TCB3Q03640 1545 aaKnown RBP2.16□□□□□ -2.06
VPS38YLR360W VMA2P16140 517 aaKnown RBP2.16□□□□□ -2.06
VPS38YLR360W VPS1P21576 704 aaKnown RBP2.16□□□□□ -2.06
VPS38YLR360W IMP1P28627 190 aa2.16□□□□□ -2.06
VPS38YLR360W YKR032WP36127 104 aa2.16□□□□□ -2.06
VPS38YLR360W YPC1P38298 316 aa2.16□□□□□ -2.06
VPS38YLR360W SSO2P39926 295 aa2.16□□□□□ -2.06
VPS38YLR360W UFD1P53044 361 aa2.16□□□□□ -2.06
VPS38YLR360W IZH4Q99393 312 aa2.16□□□□□ -2.06
VPS38YLR360W KRE1P17260 313 aa2.15□□□□□ -2.07
VPS38YLR360W IFM1P25038 676 aa2.15□□□□□ -2.07
VPS38YLR360W VPH2P32341 215 aa2.15□□□□□ -2.07
VPS38YLR360W TPO5P36029 618 aa2.15□□□□□ -2.07
VPS38YLR360W SCC4P40090 624 aa2.15□□□□□ -2.07
VPS38YLR360W YFL064CP43540 174 aa2.15□□□□□ -2.07
VPS38YLR360W PRP24P49960 444 aaKnown RBP2.15□□□□□ -2.07
VPS38YLR360W SWC4P53201 476 aa2.15□□□□□ -2.07
VPS38YLR360W ABZ2Q03266 374 aa2.15□□□□□ -2.07
VPS38YLR360W VPS20Q04272 221 aa2.15□□□□□ -2.07
VPS38YLR360W CLP1Q08685 445 aaPredicted RBP2.15□□□□□ -2.07
VPS38YLR360W YOL163WP0CF20 169 aa2.14□□□□□ -2.07
VPS38YLR360W YCR025CP25352 136 aa2.14□□□□□ -2.07
VPS38YLR360W YER084WP40057 128 aa2.14□□□□□ -2.07
VPS38YLR360W RRP42Q12277 265 aaPredicted RBP2.14□□□□□ -2.07
VPS38YLR360W YAL063C-AQ3E791 96 aa2.14□□□□□ -2.07
VPS38YLR360W RAD7P06779 565 aa2.13□□□□□ -2.07
VPS38YLR360W CAR2P07991 424 aaKnown RBP2.13□□□□□ -2.07
VPS38YLR360W RPL31AP0C2H8 113 aaKnown RBP2.13□□□□□ -2.07
VPS38YLR360W PET18P25362 215 aa2.13□□□□□ -2.07
VPS38YLR360W IMP3P32899 183 aaPredicted RBP2.13□□□□□ -2.07
VPS38YLR360W SWD2P36104 329 aaPredicted RBP2.13□□□□□ -2.07
VPS38YLR360W KRE29P40026 464 aa2.13□□□□□ -2.07
VPS38YLR360W RIB4P50861 169 aaPredicted RBP2.13□□□□□ -2.07
VPS38YLR360W UBC13P52490 153 aa2.13□□□□□ -2.07
VPS38YLR360W LIF1P53150 421 aa2.13□□□□□ -2.07
VPS38YLR360W OSH6Q02201 448 aa2.13□□□□□ -2.07
VPS38YLR360W PFK27Q12471 397 aaPredicted RBP2.13□□□□□ -2.07
VPS38YLR360W SPA2P23201 1466 aaKnown RBP2.12□□□□□ -2.07
VPS38YLR360W TDH2P00358 332 aaKnown RBP2.12□□□□□ -2.07
VPS38YLR360W TPM1P17536 199 aaKnown RBP2.12□□□□□ -2.07
VPS38YLR360W RSA4P25382 515 aaKnown RBP2.12□□□□□ -2.07
VPS38YLR360W MRPL3P36516 390 aa2.12□□□□□ -2.07
VPS38YLR360W SYS1P41544 203 aa2.12□□□□□ -2.07
VPS38YLR360W NNT1Q05874 261 aa2.12□□□□□ -2.07
VPS38YLR360W STF1P01098 86 aa2.11□□□□□ -2.07
VPS38YLR360W GCG1P32656 232 aaKnown RBP2.11□□□□□ -2.07
VPS38YLR360W YBL081WP38180 368 aaKnown RBP2.11□□□□□ -2.07
VPS38YLR360W YHL044WP38727 235 aa2.11□□□□□ -2.07
VPS38YLR360W VAB2P40003 282 aa2.11□□□□□ -2.07
VPS38YLR360W YER188WP40103 239 aa2.11□□□□□ -2.07
VPS38YLR360W MIG2P53035 382 aa2.11□□□□□ -2.07
VPS38YLR360W DBP6P53734 629 aaKnown RBP2.11□□□□□ -2.07
VPS38YLR360W PEX30Q06169 523 aa2.11□□□□□ -2.07
VPS38YLR360W CDD1Q06549 142 aa2.11□□□□□ -2.07
VPS38YLR360W FEX1Q08913 375 aa2.11□□□□□ -2.07
VPS38YLR360W FEX2Q08991 375 aa2.11□□□□□ -2.07
VPS38YLR360W APC9Q12107 265 aa2.11□□□□□ -2.07
VPS38YLR360W TIM22Q12328 207 aa2.11□□□□□ -2.07
VPS38YLR360W YPR064WQ12492 139 aa2.11□□□□□ -2.07
VPS38YLR360W OSW5P40219 148 aa2.1□□□□□ -2.07
VPS38YLR360W GDS1P41913 522 aa2.1□□□□□ -2.07
VPS38YLR360W COX16P47081 118 aa2.1□□□□□ -2.07
VPS38YLR360W VOA1P53262 265 aa2.1□□□□□ -2.07
VPS38YLR360W RSM27P53305 110 aa2.1□□□□□ -2.07
VPS38YLR360W ALG9P53868 555 aaKnown RBP2.1□□□□□ -2.07
VPS38YLR360W PRO2P54885 456 aaKnown RBP2.1□□□□□ -2.07
VPS38YLR360W MRS2Q01926 470 aa2.1□□□□□ -2.07
VPS38YLR360W MGR3Q04472 501 aa2.1□□□□□ -2.07
VPS38YLR360W TAZ1Q06510 381 aa2.1□□□□□ -2.07
VPS38YLR360W RTC5Q12108 567 aaKnown RBP2.1□□□□□ -2.07
VPS38YLR360W MSS116P15424 664 aaKnown RBP2.09□□□□□ -2.08
VPS38YLR360W PHO80P20052 293 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms