RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YOR029WQ12243 111 aa3.3□□□□□ -1.88
CTK1YKL139W TFC7Q12415 435 aa3.3□□□□□ -1.88
CTK1YKL139W YBL111CQ3E7Y5 667 aa3.3□□□□□ -1.88
CTK1YKL139W BI3Q9ZZW7 517 aa3.3□□□□□ -1.88
CTK1YKL139W DAL82P21705 255 aa3.29□□□□□ -1.88
CTK1YKL139W MRPL6P32904 214 aa3.29□□□□□ -1.88
CTK1YKL139W SPT4P32914 102 aaPredicted RBP3.29□□□□□ -1.88
CTK1YKL139W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
CTK1YKL139W RNH201P53942 307 aa3.29□□□□□ -1.88
CTK1YKL139W ALG11P53954 548 aaKnown RBP3.29□□□□□ -1.88
CTK1YKL139W CDC14Q00684 551 aa3.29□□□□□ -1.88
CTK1YKL139W GMC1Q04399 608 aa3.29□□□□□ -1.88
CTK1YKL139W YDR115WQ04598 105 aa3.29□□□□□ -1.88
CTK1YKL139W ADH6Q04894 360 aaKnown RBP3.29□□□□□ -1.88
CTK1YKL139W ATG31Q12421 196 aa3.29□□□□□ -1.88
CTK1YKL139W MRP1P10662 321 aaKnown RBP3.29□□□□□ -1.88
CTK1YKL139W ISY1P21374 235 aaPredicted RBP3.29□□□□□ -1.88
CTK1YKL139W MSN4P33749 630 aa3.29□□□□□ -1.88
CTK1YKL139W BFR1P38934 470 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
CTK1YKL139W FMC1P40491 155 aa3.29□□□□□ -1.88
CTK1YKL139W IGD1P43598 195 aa3.29□□□□□ -1.88
CTK1YKL139W YNL040WP53960 456 aaPredicted RBP3.29□□□□□ -1.88
CTK1YKL139W SDO1Q07953 250 aaKnown RBP3.29□□□□□ -1.88
CTK1YKL139W WTM1Q12363 437 aaKnown RBP3.29□□□□□ -1.88
CTK1YKL139W LAG2Q92325 660 aa3.29□□□□□ -1.88
CTK1YKL139W HIS1P00498 297 aaKnown RBP3.28□□□□□ -1.88
CTK1YKL139W BGL2P15703 313 aaKnown RBP3.28□□□□□ -1.88
CTK1YKL139W POF1P25576 258 aa3.28□□□□□ -1.88
CTK1YKL139W CSE1P33307 960 aa3.28□□□□□ -1.88
CTK1YKL139W PRS4P38063 326 aaPredicted RBP3.28□□□□□ -1.88
CTK1YKL139W YBR062CP38239 180 aa3.28□□□□□ -1.88
CTK1YKL139W BMT2P38278 337 aa3.28□□□□□ -1.88
CTK1YKL139W TAD2P47058 250 aa3.28□□□□□ -1.88
CTK1YKL139W YPT32P51996 222 aaKnown RBP3.28□□□□□ -1.88
CTK1YKL139W RMI1Q02685 241 aa3.28□□□□□ -1.88
CTK1YKL139W MRX11Q03079 207 aa3.28□□□□□ -1.88
CTK1YKL139W ADD37Q03233 198 aa3.28□□□□□ -1.88
CTK1YKL139W PEX30Q06169 523 aa3.28□□□□□ -1.88
CTK1YKL139W MMT2Q08970 484 aa3.28□□□□□ -1.88
CTK1YKL139W YCR016WP25617 290 aaKnown RBP3.27□□□□□ -1.89
CTK1YKL139W NTG1P31378 399 aa3.27□□□□□ -1.89
CTK1YKL139W SDS24P38314 527 aa3.27□□□□□ -1.89
CTK1YKL139W YER085CP40058 173 aa3.27□□□□□ -1.89
CTK1YKL139W DDI1P40087 428 aa3.27□□□□□ -1.89
CTK1YKL139W PEX31P53203 462 aa3.27□□□□□ -1.89
CTK1YKL139W MNT4P53745 580 aa3.27□□□□□ -1.89
CTK1YKL139W YNR066CP53752 436 aa3.27□□□□□ -1.89
CTK1YKL139W TPS1Q00764 495 aaKnown RBP3.27□□□□□ -1.89
CTK1YKL139W CWC21Q03375 135 aaKnown RBP3.27□□□□□ -1.89
CTK1YKL139W DPP1Q05521 289 aa3.27□□□□□ -1.89
CTK1YKL139W YPL245WQ12179 454 aaKnown RBP3.27□□□□□ -1.89
CTK1YKL139W SUA5P32579 426 aa3.26□□□□□ -1.89
CTK1YKL139W NPT1P39683 429 aaKnown RBP3.26□□□□□ -1.89
CTK1YKL139W VAB2P40003 282 aa3.26□□□□□ -1.89
CTK1YKL139W RTR1P40084 226 aaPredicted RBP3.26□□□□□ -1.89
CTK1YKL139W SDS23P53172 527 aa3.26□□□□□ -1.89
CTK1YKL139W SFH1Q06168 426 aa3.26□□□□□ -1.89
CTK1YKL139W PAM18Q07914 168 aa3.26□□□□□ -1.89
CTK1YKL139W SRO7Q12038 1033 aa3.26□□□□□ -1.89
CTK1YKL139W YOR114WQ12219 294 aa3.26□□□□□ -1.89
CTK1YKL139W IFM1P25038 676 aa3.25□□□□□ -1.89
CTK1YKL139W IES6P32617 166 aa3.25□□□□□ -1.89
CTK1YKL139W CYM1P32898 989 aa3.25□□□□□ -1.89
CTK1YKL139W GPX1P36014 167 aa3.25□□□□□ -1.89
CTK1YKL139W DED81P38707 554 aaKnown RBP3.25□□□□□ -1.89
CTK1YKL139W TCD1P38756 429 aa3.25□□□□□ -1.89
CTK1YKL139W GCN20P43535 752 aaKnown RBP3.25□□□□□ -1.89
CTK1YKL139W HIT1P46973 164 aa3.25□□□□□ -1.89
CTK1YKL139W NBP1P52919 319 aaPredicted RBP3.25□□□□□ -1.89
CTK1YKL139W TPN1P53099 579 aa3.25□□□□□ -1.89
CTK1YKL139W KTR6P54070 446 aa3.25□□□□□ -1.89
CTK1YKL139W CTR3Q06686 241 aa3.25□□□□□ -1.89
CTK1YKL139W MSH5Q12175 901 aa3.25□□□□□ -1.89
CTK1YKL139W RPP0P05317 312 aaKnown RBP3.25□□□□□ -1.89
CTK1YKL139W YKL187CP34231 750 aa3.25□□□□□ -1.89
CTK1YKL139W BMH2P34730 273 aaKnown RBP3.25□□□□□ -1.89
CTK1YKL139W ATG12P38316 186 aa3.25□□□□□ -1.89
CTK1YKL139W RPL21AQ02753 160 aaKnown RBP3.25□□□□□ -1.89
CTK1YKL139W INP2Q03824 705 aa3.25□□□□□ -1.89
CTK1YKL139W MYO5Q04439 1219 aaKnown RBP3.25□□□□□ -1.89
CTK1YKL139W YOR292CQ08743 309 aa3.25□□□□□ -1.89
CTK1YKL139W PER33Q12144 273 aa3.25□□□□□ -1.89
CTK1YKL139W KRE6P32486 720 aa3.24□□□□□ -1.89
CTK1YKL139W SRB4P32569 687 aa3.24□□□□□ -1.89
CTK1YKL139W CDC13P32797 924 aaKnown RBP3.24□□□□□ -1.89
CTK1YKL139W SHE3P38272 425 aaKnown RBP3.24□□□□□ -1.89
CTK1YKL139W PRS2P38620 318 aaKnown RBP3.24□□□□□ -1.89
CTK1YKL139W IBA57P47158 497 aa3.24□□□□□ -1.89
CTK1YKL139W SEC13Q04491 297 aaKnown RBP3.24□□□□□ -1.89
CTK1YKL139W TAF9Q05027 157 aa3.24□□□□□ -1.89
CTK1YKL139W VIK1Q12045 647 aa3.24□□□□□ -1.89
CTK1YKL139W COX4P04037 155 aa3.23□□□□□ -1.89
CTK1YKL139W RPS3P05750 240 aaKnown RBP3.23□□□□□ -1.89
CTK1YKL139W ARG80P07249 177 aa3.23□□□□□ -1.89
CTK1YKL139W PET494P07390 489 aaPredicted RBP3.23□□□□□ -1.89
CTK1YKL139W ZIP1P31111 875 aa3.23□□□□□ -1.89
CTK1YKL139W DOA4P32571 926 aa3.23□□□□□ -1.89
CTK1YKL139W YEL045CP32616 141 aa3.23□□□□□ -1.89
CTK1YKL139W GPI18P38211 433 aa3.23□□□□□ -1.89
CTK1YKL139W EFM1P38732 585 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms