RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	SNO4	Q04902	237 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	BUR2	Q05949	395 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	BNA5	Q05979	453 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YPR127W	Q06494	345 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	GPN3	Q06543	272 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	SSK1	Q07084	712 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YEH1	Q07804	573 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	BSC6	Q08280	497 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	HSP33	Q08914	237 aa	Known RBP	4.6	□□□□□ -1.67
KTI12	YKL110C	HSP32	Q08992	237 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YOR214C	Q12282	236 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YDR061W	Q12298	539 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	APC2	Q12440	853 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	RTN2	Q12443	393 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	PSF1	Q12488	208 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	DBF2	P22204	572 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	PRP28	P23394	588 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	EXG1	P23776	448 aa	Known RBP	4.59	□□□□□ -1.67
KTI12	YKL110C	ATG22	P25568	528 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	FAA1	P30624	700 aa	Known RBP	4.59	□□□□□ -1.67
KTI12	YKL110C	SNC1	P31109	117 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	ECT1	P33412	323 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	PET112	P33893	541 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	CLG1	P35190	452 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	ANR2	P36090	516 aa	Predicted RBP	4.59	□□□□□ -1.67
KTI12	YKL110C	YBR063C	P38083	404 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	DTR1	P38125	572 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	PAU24	P38155	120 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	MAL32	P38158	584 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	VMA22	P38784	181 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	FET5	P43561	622 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	SEH1	P53011	349 aa	Known RBP	4.59	□□□□□ -1.67
KTI12	YKL110C	ORM1	P53224	222 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	SAY1	P53324	424 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	YGR266W	P53326	701 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	MAL12	P53341	584 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	PAU12	P53343	120 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	MRPL13	Q02204	264 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	DML1	Q03652	475 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	YDR514C	Q04408	483 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	RRN11	Q04712	507 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	RBS1	Q05672	457 aa	Known RBP	4.59	□□□□□ -1.67
KTI12	YKL110C	DIC1	Q06143	298 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	PHO92	Q06390	306 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	YPR196W	Q06595	470 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	IPK1	Q06667	281 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	YOL073C	Q08232	322 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	HRT1	Q08273	121 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	RDR1	Q08904	546 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	GUP2	Q08929	609 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	ATG41	Q12048	136 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	RTK1	Q12100	620 aa	Predicted RBP	4.59	□□□□□ -1.67
KTI12	YKL110C	YPR1	Q12458	312 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	SUS1	Q6WNK7	96 aa		4.59	□□□□□ -1.67
KTI12	YKL110C	CDC9	P04819	755 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	PDE2	P06776	526 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	GRX2	P17695	143 aa	Known RBP	4.58	□□□□□ -1.68
KTI12	YKL110C	BOS1	P25385	244 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	AHC2	P25649	128 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	HOM6	P31116	359 aa	Known RBP	4.58	□□□□□ -1.68
KTI12	YKL110C	RNP1	P32385	249 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	HSP150	P32478	413 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	PPQ1	P32945	549 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	SDS22	P36047	338 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	EXO84	P38261	753 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	NSG1	P38837	291 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	FET3	P38993	636 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	HPA3	P39979	161 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	SDP1	P40479	209 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	HIS6	P40545	261 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	BAP3	P41815	604 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	SPG5	P42933	373 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	SNO3	P43544	222 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	ATG18	P43601	500 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	APS3	P47064	194 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	YJR120W	P47157	116 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	TPN1	P53099	579 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	YGR067C	P53243	804 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	COA4	Q05809	96 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	TPO3	Q06451	622 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	MLC2	Q06580	163 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	YPL199C	Q08954	240 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	YOR283W	Q12040	230 aa	Known RBP	4.58	□□□□□ -1.68
KTI12	YKL110C	BTS1	Q12051	335 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	SKM1	Q12469	655 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	FRE6	Q12473	712 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	YIL046W-A	Q3E7Z4	54 aa		4.58	□□□□□ -1.68
KTI12	YKL110C	GCN4	P03069	281 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	CAN1	P04817	590 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	PET54	P10834	293 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	ARF1	P11076	181 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	SEC12	P11655	471 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	RPB8	P20436	146 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	YCR102C	P25608	368 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	FUN19	P28003	413 aa	Predicted RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	PRE4	P30657	266 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
KTI12	YKL110C	DOA4	P32571	926 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	HIS7	P33734	552 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	TMA19	P35691	167 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms