RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W VMA5P31412 392 aaKnown RBP3.38□□□□□ -1.87
NUP85YJR042W REC114P32841 428 aa3.38□□□□□ -1.87
NUP85YJR042W CSG2P35206 410 aa3.38□□□□□ -1.87
NUP85YJR042W APL3P38065 1025 aa3.38□□□□□ -1.87
NUP85YJR042W PHO88P38264 188 aaPredicted RBP3.38□□□□□ -1.87
NUP85YJR042W LEU5P38702 357 aa3.38□□□□□ -1.87
NUP85YJR042W FAA2P39518 744 aa3.38□□□□□ -1.87
NUP85YJR042W RPH1P39956 796 aa3.38□□□□□ -1.87
NUP85YJR042W MRPL49P40858 161 aaPredicted RBP3.38□□□□□ -1.87
NUP85YJR042W GDS1P41913 522 aa3.38□□□□□ -1.87
NUP85YJR042W YJR056CP47115 236 aa3.38□□□□□ -1.87
NUP85YJR042W GET1P53192 235 aa3.38□□□□□ -1.87
NUP85YJR042W CDH1P53197 566 aa3.38□□□□□ -1.87
NUP85YJR042W MSO1P53604 210 aaKnown RBP3.38□□□□□ -1.87
NUP85YJR042W VAC7P53950 1165 aa3.38□□□□□ -1.87
NUP85YJR042W RHO4Q00246 291 aa3.38□□□□□ -1.87
NUP85YJR042W PRM15Q03262 622 aa3.38□□□□□ -1.87
NUP85YJR042W MRPL51Q06090 140 aaPredicted RBP3.38□□□□□ -1.87
NUP85YJR042W DXO1Q06349 442 aa3.38□□□□□ -1.87
NUP85YJR042W ENB1Q08299 606 aa3.38□□□□□ -1.87
NUP85YJR042W OSW1Q08692 278 aa3.38□□□□□ -1.87
NUP85YJR042W SRL2Q12020 392 aa3.38□□□□□ -1.87
NUP85YJR042W YDR215CQ12240 137 aa3.38□□□□□ -1.87
NUP85YJR042W RGT2Q12300 763 aa3.38□□□□□ -1.87
NUP85YJR042W SET6Q12529 373 aa3.38□□□□□ -1.87
NUP85YJR042W RGS2Q99188 309 aa3.38□□□□□ -1.87
NUP85YJR042W MOT1P32333 1867 aa3.37□□□□□ -1.87
NUP85YJR042W PAB1P04147 577 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87 RIP-Chip
NUP85YJR042W POF1P25576 258 aa3.37□□□□□ -1.87
NUP85YJR042W BUB3P26449 341 aa3.37□□□□□ -1.87
NUP85YJR042W NTF2P33331 125 aaKnown RBP3.37□□□□□ -1.87
NUP85YJR042W HIS7P33734 552 aaKnown RBP3.37□□□□□ -1.87
NUP85YJR042W FLO10P36170 1169 aa3.37□□□□□ -1.87
NUP85YJR042W FIG1P38224 298 aa3.37□□□□□ -1.87
NUP85YJR042W MET30P39014 640 aa3.37□□□□□ -1.87
NUP85YJR042W POP1P41812 875 aa3.37□□□□□ -1.87
NUP85YJR042W LSM1P47017 172 aaKnown RBP3.37□□□□□ -1.87
NUP85YJR042W SMM1P53720 384 aaKnown RBP3.37□□□□□ -1.87
NUP85YJR042W MRPL50P53724 139 aa3.37□□□□□ -1.87
NUP85YJR042W KIN4Q01919 800 aa3.37□□□□□ -1.87
NUP85YJR042W ECM11Q04110 302 aa3.37□□□□□ -1.87
NUP85YJR042W YPQ1Q12010 308 aa3.37□□□□□ -1.87
NUP85YJR042W TMS1Q12116 473 aa3.37□□□□□ -1.87
NUP85YJR042W RPL31AP0C2H8 113 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W ARF1P11076 181 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W URA6P15700 204 aa3.36□□□□□ -1.87
NUP85YJR042W SEN2P16658 377 aa3.36□□□□□ -1.87
NUP85YJR042W GAS1P22146 559 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W SLM5P25345 492 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W COQ3P27680 312 aa3.36□□□□□ -1.87
NUP85YJR042W VPS51P36116 164 aa3.36□□□□□ -1.87
NUP85YJR042W YMC2P38087 329 aa3.36□□□□□ -1.87
NUP85YJR042W DHH1P39517 506 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W ISC1P40015 477 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W DDI1P40087 428 aa3.36□□□□□ -1.87
NUP85YJR042W CPR7P47103 393 aa3.36□□□□□ -1.87
NUP85YJR042W ALG13P53178 202 aa3.36□□□□□ -1.87
NUP85YJR042W DUG3P53871 357 aa3.36□□□□□ -1.87
NUP85YJR042W LOA1Q06508 300 aa3.36□□□□□ -1.87
NUP85YJR042W PLB3Q08108 686 aa3.36□□□□□ -1.87
NUP85YJR042W SAM4Q08985 325 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W AHA1Q12449 350 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W AI5_BETAQ9ZZX0 354 aa3.36□□□□□ -1.87
NUP85YJR042W SSC1P0CS90 654 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W UTR4P32626 227 aa3.36□□□□□ -1.87
NUP85YJR042W CDC13P32797 924 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W NUF2P33895 451 aa3.36□□□□□ -1.87
NUP85YJR042W GPX2P38143 162 aa3.36□□□□□ -1.87
NUP85YJR042W YBP1P38315 674 aa3.36□□□□□ -1.87
NUP85YJR042W ATG12P38316 186 aa3.36□□□□□ -1.87
NUP85YJR042W EXO1P39875 702 aa3.36□□□□□ -1.87
NUP85YJR042W HMF1P40037 129 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W ARG2P40360 574 aa3.36□□□□□ -1.87
NUP85YJR042W BMT5P40493 336 aa3.36□□□□□ -1.87
NUP85YJR042W PCP1P53259 346 aa3.36□□□□□ -1.87
NUP85YJR042W MTM1P53320 366 aa3.36□□□□□ -1.87
NUP85YJR042W SNO1Q03144 224 aa3.36□□□□□ -1.87
NUP85YJR042W PRM6Q04705 352 aa3.36□□□□□ -1.87
NUP85YJR042W DIC1Q06143 298 aa3.36□□□□□ -1.87
NUP85YJR042W YPR147CQ06522 304 aaKnown RBP3.36□□□□□ -1.87
NUP85YJR042W YEH2Q07950 538 aa3.36□□□□□ -1.87
NUP85YJR042W SKI7Q08491 747 aaPredicted RBP3.36□□□□□ -1.87
NUP85YJR042W TPI1P00942 248 aaKnown RBP3.35□□□□□ -1.87
NUP85YJR042W BI2P03873 423 aa3.35□□□□□ -1.87
NUP85YJR042W RPP2AP05319 106 aaKnown RBP3.35□□□□□ -1.87
NUP85YJR042W CMD1P06787 147 aaKnown RBP3.35□□□□□ -1.87
NUP85YJR042W EXO70P19658 623 aa3.35□□□□□ -1.87
NUP85YJR042W APE2P32454 952 aaKnown RBP3.35□□□□□ -1.87
NUP85YJR042W NUP2P32499 720 aa3.35□□□□□ -1.87
NUP85YJR042W ATO2P32907 282 aa3.35□□□□□ -1.87
NUP85YJR042W YAT2P40017 923 aa3.35□□□□□ -1.87
NUP85YJR042W JLP2P40206 208 aa3.35□□□□□ -1.87
NUP85YJR042W EAF6P47128 113 aa3.35□□□□□ -1.87
NUP85YJR042W YNR066CP53752 436 aa3.35□□□□□ -1.87
NUP85YJR042W YLR460CP54007 376 aa3.35□□□□□ -1.87
NUP85YJR042W LGE1Q02796 332 aaKnown RBP3.35□□□□□ -1.87
NUP85YJR042W FMN1Q03778 218 aa3.35□□□□□ -1.87
NUP85YJR042W HPF1Q05164 967 aa3.35□□□□□ -1.87
NUP85YJR042W YOR389WQ08912 624 aa3.35□□□□□ -1.87
NUP85YJR042W YLL056CQ12177 298 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms