RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SPS100P13130 326 aa2.41□□□□□ -2.02
SEC28YIL076W MYO3P36006 1272 aa2.41□□□□□ -2.02
SEC28YIL076W DAD2P36162 133 aa2.41□□□□□ -2.02
SEC28YIL076W RXT2P38255 430 aa2.41□□□□□ -2.02
SEC28YIL076W ECO1P43605 281 aa2.41□□□□□ -2.02
SEC28YIL076W YPL080CQ02826 108 aa2.41□□□□□ -2.02
SEC28YIL076W ULS1Q08562 1619 aa2.41□□□□□ -2.02
SEC28YIL076W YOR093CQ12275 1648 aa2.41□□□□□ -2.02
SEC28YIL076W SEC7P11075 2009 aaKnown RBP2.41□□□□□ -2.02
SEC28YIL076W TDH2P00358 332 aaKnown RBP2.4□□□□□ -2.03
SEC28YIL076W TDH3P00359 332 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SEC28YIL076W HSP82P02829 709 aaKnown RBP2.4□□□□□ -2.03
SEC28YIL076W SAG1P20840 650 aa2.4□□□□□ -2.03
SEC28YIL076W HXT2P23585 541 aa2.4□□□□□ -2.03
SEC28YIL076W DCC1P25559 380 aa2.4□□□□□ -2.03
SEC28YIL076W YKR032WP36127 104 aa2.4□□□□□ -2.03
SEC28YIL076W CTM1P38818 585 aa2.4□□□□□ -2.03
SEC28YIL076W YFR045WP43617 309 aa2.4□□□□□ -2.03
SEC28YIL076W YNL143CP53908 130 aa2.4□□□□□ -2.03
SEC28YIL076W RGM1Q00453 211 aa2.4□□□□□ -2.03
SEC28YIL076W MRX9Q07349 420 aaKnown RBP2.4□□□□□ -2.03
SEC28YIL076W SKS1Q12505 502 aa2.4□□□□□ -2.03
SEC28YIL076W GDB1Q06625 1536 aa2.4□□□□□ -2.03
SEC28YIL076W DOP1Q03921 1698 aa2.4□□□□□ -2.03
SEC28YIL076W ARO1P08566 1588 aaKnown RBP2.4□□□□□ -2.03
SEC28YIL076W IQG1Q12280 1495 aa2.39□□□□□ -2.03
SEC28YIL076W STE3P06783 470 aa2.39□□□□□ -2.03
SEC28YIL076W KRE1P17260 313 aa2.39□□□□□ -2.03
SEC28YIL076W EOS1P53938 366 aa2.39□□□□□ -2.03
SEC28YIL076W ACT1P60010 375 aaKnown RBP2.39□□□□□ -2.03
SEC28YIL076W IES3Q12345 250 aa2.39□□□□□ -2.03
SEC28YIL076W FRE6Q12473 712 aa2.39□□□□□ -2.03
SEC28YIL076W RGS2Q99188 309 aa2.39□□□□□ -2.03
SEC28YIL076W TRM3Q07527 1436 aa2.39□□□□□ -2.03
SEC28YIL076W PDR10P51533 1564 aa2.39□□□□□ -2.03
SEC28YIL076W NUP157P40064 1391 aaKnown RBP2.38□□□□□ -2.03
SEC28YIL076W YLL053CP0CD98 152 aa2.38□□□□□ -2.03
SEC28YIL076W YNL040WP53960 456 aaPredicted RBP2.38□□□□□ -2.03
SEC28YIL076W BUD3P25558 1636 aa2.38□□□□□ -2.03
SEC28YIL076W PDR15Q04182 1529 aaKnown RBP2.37□□□□□ -2.03
SEC28YIL076W CDC42P19073 191 aa2.37□□□□□ -2.03
SEC28YIL076W YAP3P38749 330 aa2.37□□□□□ -2.03
SEC28YIL076W ALP1P38971 573 aa2.37□□□□□ -2.03
SEC28YIL076W YER084WP40057 128 aa2.37□□□□□ -2.03
SEC28YIL076W RDL2Q08742 149 aaKnown RBP2.37□□□□□ -2.03
SEC28YIL076W ERP3Q12403 225 aa2.37□□□□□ -2.03
SEC28YIL076W PRM4Q12498 284 aa2.37□□□□□ -2.03
SEC28YIL076W SPO24Q3E752 67 aa2.37□□□□□ -2.03
SEC28YIL076W MLP2P40457 1679 aa2.37□□□□□ -2.03
SEC28YIL076W BEM2P39960 2167 aaKnown RBP2.36□□□□□ -2.03
SEC28YIL076W CBP2P03874 630 aaPredicted RBP2.36□□□□□ -2.03
SEC28YIL076W CSE1P33307 960 aa2.36□□□□□ -2.03
SEC28YIL076W BUD2P33314 1104 aa2.36□□□□□ -2.03
SEC28YIL076W PET8P38921 284 aa2.36□□□□□ -2.03
SEC28YIL076W BTT1P40314 149 aaPredicted RBP2.36□□□□□ -2.03
SEC28YIL076W DTD1Q07648 150 aaKnown RBP2.36□□□□□ -2.03
SEC28YIL076W MRX4Q12467 430 aa2.36□□□□□ -2.03
SEC28YIL076W DNF3Q12674 1656 aa2.35□□□□□ -2.03
SEC28YIL076W MEI5P32489 222 aa2.35□□□□□ -2.03
SEC28YIL076W PRP39P39682 629 aaKnown RBP2.35□□□□□ -2.03
SEC28YIL076W EDC2P40023 145 aaPredicted RBP2.35□□□□□ -2.03
SEC28YIL076W FYV8P46949 817 aaKnown RBP2.35□□□□□ -2.03
SEC28YIL076W PXR1P53335 271 aaPredicted RBP2.35□□□□□ -2.03
SEC28YIL076W CDD1Q06549 142 aa2.35□□□□□ -2.03
SEC28YIL076W FEX1Q08913 375 aa2.35□□□□□ -2.03
SEC28YIL076W FEX2Q08991 375 aa2.35□□□□□ -2.03
SEC28YIL076W CHC1P22137 1653 aaKnown RBP2.34□□□□□ -2.03
SEC28YIL076W YSP2Q06681 1438 aa2.34□□□□□ -2.03
SEC28YIL076W TY3B-GQ99315 1547 aa2.34□□□□□ -2.03
SEC28YIL076W RBK1P25332 333 aa2.34□□□□□ -2.03
SEC28YIL076W YBL081WP38180 368 aaKnown RBP2.34□□□□□ -2.03
SEC28YIL076W ATG12P38316 186 aa2.34□□□□□ -2.03
SEC28YIL076W YIL089WP40500 205 aa2.34□□□□□ -2.03
SEC28YIL076W YNR066CP53752 436 aa2.34□□□□□ -2.03
SEC28YIL076W AQR1P53943 586 aa2.34□□□□□ -2.03
SEC28YIL076W YPL245WQ12179 454 aaKnown RBP2.34□□□□□ -2.03
SEC28YIL076W SNF6P18888 332 aa2.33□□□□□ -2.04
SEC28YIL076W PRE7P23724 241 aaKnown RBP2.33□□□□□ -2.04
SEC28YIL076W RSA4P25382 515 aaKnown RBP2.33□□□□□ -2.04
SEC28YIL076W YPS1P32329 569 aa2.33□□□□□ -2.04
SEC28YIL076W SUR1P33300 382 aa2.33□□□□□ -2.04
SEC28YIL076W MED6P38782 295 aa2.33□□□□□ -2.04
SEC28YIL076W TAF6P53040 516 aa2.33□□□□□ -2.04
SEC28YIL076W NBL1Q3E7Y6 73 aa2.33□□□□□ -2.04
SEC28YIL076W YGP1P38616 354 aaKnown RBP2.32□□□□□ -2.04
SEC28YIL076W UFD1P53044 361 aa2.32□□□□□ -2.04
SEC28YIL076W PEX30Q06169 523 aa2.32□□□□□ -2.04
SEC28YIL076W DBP9Q06218 594 aaKnown RBP2.32□□□□□ -2.04
SEC28YIL076W YNL146WP53906 100 aa2.31□□□□□ -2.04
SEC28YIL076W YLR012CQ07927 99 aa2.31□□□□□ -2.04
SEC28YIL076W CAT8P39113 1433 aa2.31□□□□□ -2.04
SEC28YIL076W HAP1P0CE41 1502 aa2.31□□□□□ -2.04
SEC28YIL076W USO1P25386 1790 aa2.31□□□□□ -2.04
SEC28YIL076W LAS1P36146 502 aaPredicted RBP2.3□□□□□ -2.04
SEC28YIL076W GEA1P47102 1408 aaPredicted RBP2.3□□□□□ -2.04
SEC28YIL076W YBT1P32386 1661 aa2.3□□□□□ -2.04
SEC28YIL076W YOL163WP0CF20 169 aa2.29□□□□□ -2.04
SEC28YIL076W YAK1P14680 807 aa2.29□□□□□ -2.04
SEC28YIL076W ERD1P16151 362 aa2.29□□□□□ -2.04
SEC28YIL076W PCL7P40186 285 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 131 ms