RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W PET20Q99373 253 aa5.16□□□□□ -1.58
ATG7YHR171W RPL28P02406 149 aaKnown RBP5.15□□□□□ -1.58
ATG7YHR171W YAP1P19880 650 aaKnown RBP5.15□□□□□ -1.58
ATG7YHR171W SLY1P22213 666 aa5.15□□□□□ -1.58
ATG7YHR171W CPR3P25719 182 aa5.15□□□□□ -1.58
ATG7YHR171W RPL16BP26785 198 aaKnown RBP5.15□□□□□ -1.58
ATG7YHR171W PHD1P36093 366 aa5.15□□□□□ -1.58
ATG7YHR171W CSM2P40465 213 aa5.15□□□□□ -1.58
ATG7YHR171W RSM25P40496 264 aa5.15□□□□□ -1.58
ATG7YHR171W CIN2P46670 268 aa5.15□□□□□ -1.58
ATG7YHR171W CTK3P46963 296 aaPredicted RBP5.15□□□□□ -1.58
ATG7YHR171W TAZ1Q06510 381 aa5.15□□□□□ -1.58
ATG7YHR171W PFA4Q12006 378 aa5.15□□□□□ -1.58
ATG7YHR171W TAF10Q12030 206 aa5.15□□□□□ -1.58
ATG7YHR171W RPL20AP0CX23 172 aaKnown RBP5.15□□□□□ -1.59
ATG7YHR171W RPL20BP0CX24 172 aaPredicted RBP5.15□□□□□ -1.59
ATG7YHR171W TIP1P27654 210 aaPredicted RBP5.15□□□□□ -1.59
ATG7YHR171W TRR1P29509 319 aaKnown RBP5.15□□□□□ -1.59
ATG7YHR171W KAR9P32526 644 aa5.15□□□□□ -1.59
ATG7YHR171W SEO1P39709 593 aa5.15□□□□□ -1.59
ATG7YHR171W COG3P40094 801 aa5.15□□□□□ -1.59
ATG7YHR171W SOK1P40317 901 aa5.15□□□□□ -1.59
ATG7YHR171W YIA6P40556 373 aa5.15□□□□□ -1.59
ATG7YHR171W TES1P41903 349 aaKnown RBP5.15□□□□□ -1.59
ATG7YHR171W PRP24P49960 444 aaKnown RBP5.15□□□□□ -1.59
ATG7YHR171W GOR1P53839 350 aa5.15□□□□□ -1.59
ATG7YHR171W YEH2Q07950 538 aa5.15□□□□□ -1.59
ATG7YHR171W REP1P03871 373 aa5.14□□□□□ -1.59
ATG7YHR171W YAR066WP0CX18 203 aa5.14□□□□□ -1.59
ATG7YHR171W YHR214WP0CX19 203 aa5.14□□□□□ -1.59
ATG7YHR171W GCY1P14065 312 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59 RIP-Chip
ATG7YHR171W YKL075CP36083 450 aa5.14□□□□□ -1.59
ATG7YHR171W SDS24P38314 527 aa5.14□□□□□ -1.59
ATG7YHR171W GIM4P40005 111 aaKnown RBP5.14□□□□□ -1.59
ATG7YHR171W SFH5P47008 294 aa5.14□□□□□ -1.59
ATG7YHR171W MRM2P53123 320 aa5.14□□□□□ -1.59
ATG7YHR171W SWC4P53201 476 aa5.14□□□□□ -1.59
ATG7YHR171W ASI3P53983 676 aa5.14□□□□□ -1.59
ATG7YHR171W ODC1Q03028 310 aa5.14□□□□□ -1.59
ATG7YHR171W CTL1Q03220 320 aaKnown RBP5.14□□□□□ -1.59
ATG7YHR171W YDL114WQ07530 308 aa5.14□□□□□ -1.59
ATG7YHR171W YOL073CQ08232 322 aa5.14□□□□□ -1.59
ATG7YHR171W YNG1Q08465 219 aa5.14□□□□□ -1.59
ATG7YHR171W CPT1P17898 393 aa5.13□□□□□ -1.59
ATG7YHR171W EXO70P19658 623 aa5.13□□□□□ -1.59
ATG7YHR171W YMC1P32331 307 aa5.13□□□□□ -1.59
ATG7YHR171W PUB1P32588 453 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
ATG7YHR171W SPT4P32914 102 aaPredicted RBP5.13□□□□□ -1.59
ATG7YHR171W SPC34P36131 295 aa5.13□□□□□ -1.59
ATG7YHR171W HMT1P38074 348 aa5.13□□□□□ -1.59
ATG7YHR171W YBP1P38315 674 aa5.13□□□□□ -1.59
ATG7YHR171W NUP57P48837 541 aa5.13□□□□□ -1.59
ATG7YHR171W PEX31P53203 462 aa5.13□□□□□ -1.59
ATG7YHR171W VHT1P53241 593 aa5.13□□□□□ -1.59
ATG7YHR171W MSO1P53604 210 aaKnown RBP5.13□□□□□ -1.59
ATG7YHR171W RNY1Q02933 434 aaKnown RBP5.13□□□□□ -1.59
ATG7YHR171W CCE1Q03702 353 aa5.13□□□□□ -1.59
ATG7YHR171W DXO1Q06349 442 aa5.13□□□□□ -1.59
ATG7YHR171W TIM18Q08749 192 aa5.13□□□□□ -1.59
ATG7YHR171W YLR111WQ12528 110 aa5.13□□□□□ -1.59
ATG7YHR171W PMT2P31382 759 aa5.13□□□□□ -1.59
ATG7YHR171W VPH2P32341 215 aa5.13□□□□□ -1.59
ATG7YHR171W JEN1P36035 616 aa5.13□□□□□ -1.59
ATG7YHR171W YCR087C-AP37263 153 aa5.13□□□□□ -1.59
ATG7YHR171W DER1P38307 211 aa5.13□□□□□ -1.59
ATG7YHR171W SHG1P38337 142 aa5.13□□□□□ -1.59
ATG7YHR171W AIM39Q08223 395 aa5.13□□□□□ -1.59
ATG7YHR171W RDL2Q08742 149 aaKnown RBP5.13□□□□□ -1.59
ATG7YHR171W DDC1Q08949 612 aa5.13□□□□□ -1.59
ATG7YHR171W UTP23Q12339 254 aaKnown RBP5.13□□□□□ -1.59
ATG7YHR171W PNS1Q12412 539 aa5.13□□□□□ -1.59
ATG7YHR171W YPR053CQ6Q5F3 151 aa5.13□□□□□ -1.59
ATG7YHR171W PHO80P20052 293 aa5.12□□□□□ -1.59
ATG7YHR171W TOD6P34219 525 aa5.12□□□□□ -1.59
ATG7YHR171W MMS2P53152 137 aa5.12□□□□□ -1.59
ATG7YHR171W JAC1P53193 184 aa5.12□□□□□ -1.59
ATG7YHR171W TRM44Q02648 567 aaKnown RBP5.12□□□□□ -1.59
ATG7YHR171W YPL199CQ08954 240 aa5.12□□□□□ -1.59
ATG7YHR171W SLM3Q12093 417 aa5.12□□□□□ -1.59
ATG7YHR171W YPL150WQ12152 901 aa5.12□□□□□ -1.59
ATG7YHR171W ICT1Q12385 394 aa5.12□□□□□ -1.59
ATG7YHR171W YPR064WQ12492 139 aa5.12□□□□□ -1.59
ATG7YHR171W ARP6Q12509 438 aa5.12□□□□□ -1.59
ATG7YHR171W SIR4P11978 1358 aa5.12□□□□□ -1.59
ATG7YHR171W SGE1P33335 543 aa5.11□□□□□ -1.59
ATG7YHR171W ECM13P38195 257 aa5.11□□□□□ -1.59
ATG7YHR171W VPS52P39904 641 aa5.11□□□□□ -1.59
ATG7YHR171W VRG4P40107 337 aa5.11□□□□□ -1.59
ATG7YHR171W YIL169CP40442 995 aa5.11□□□□□ -1.59
ATG7YHR171W MRPL49P40858 161 aaPredicted RBP5.11□□□□□ -1.59
ATG7YHR171W YGL235WP53071 178 aa5.11□□□□□ -1.59
ATG7YHR171W NSA1P53136 463 aaPredicted RBP5.11□□□□□ -1.59
ATG7YHR171W YNR066CP53752 436 aa5.11□□□□□ -1.59
ATG7YHR171W YLR152CP54072 576 aa5.11□□□□□ -1.59
ATG7YHR171W YMR027WQ04371 470 aa5.11□□□□□ -1.59
ATG7YHR171W RIF2Q06208 395 aa5.11□□□□□ -1.59
ATG7YHR171W MUM3Q08750 479 aa5.11□□□□□ -1.59
ATG7YHR171W NOT5Q12514 560 aaPredicted RBP5.11□□□□□ -1.59
ATG7YHR171W YNK1P36010 153 aaKnown RBP5.11□□□□□ -1.59
ATG7YHR171W GRE3P38715 327 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
Retrieved 100 of 5,963 RNA–protein pairs in 99 ms